Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g0983 ATGCCTTCATGGTGGGGGAAGTCGTCATCCAAAGAAGTGAAGAAGAAAACAAGCAAGGAAAGTTTCATCGACTCATTACACCGAAAGTTTAAGAATTCACCTGAAGGTAAAGTAAACAGCAGATCAGGAAGTTCTCGTAAATGTGGTGGTGACACTATATCTGAGAAAGGGTCCAAATCACCAATATCAAGATCGCCATCACCTTCCAAAGAAGTTGCTAGATGTCAAAGTTTTGCAGAAAGATCGTGTTCTCACAAACTTCCACTTCCAGATTTGCACCCTGTAGGTGTAGGTCGCACAGATTCTGGGATTAGTGCAACAGCAAAATCCAAATTAGAGAGAAGCTCCAAGACATCTTTATTCCTACCCCTCCCTAGACCTGCTTGTATTCGAAGTAGGCCAGATCCTGCAGATTTGGATGGAGATTTGGTCACTGGTTCAGTCTTTGGTGAGTCCTCAAGTGATAGTGATGATCCCAGTGATTCACGTCAACGTAGTCCTCAGGCAACTGACTATGACATTGGGGCTAGAACTGTGATAGGTTCTACTGAAGCTAGTGAAACTCTCAAGGATCAGTCTCCTACTGTCGTGCAAATAAATCTAAAAGAGGGCAAGAAATTGGAAAGCCTTCCATTTCCTCATAAGAATTCTTCAATACCTAAACGGAGGCCTTTAAGCAGCAACGTAACAAATCTACAAGTTCCTCGCCATGGGGCCTTCTTTAGCGCACCAGATAGTTCTATGTCTAGTCCCTCTAGAAGTCCCATGAGGATATTTAGCACTGAGCAAGTCATGAACGCTGCTGTTTGGGCTGGAAAATCTCACCCAGATGTCATTTTAGCTGGATCTGGCCCTTGTTCCAGTCCTGGCTCTGGTCACAATTCAGGGCACAACTCTATGGGAGGTGATATGGCAGGCCACTTCTTTTGGCAACAAAGTAGGGGGAGCCCGGAATATTCTCCTGTACCTAGTTCTAGAATGACTAGCCCCGGTCCTAGTTCCAGAATTCAAAGTGGTGCTGTCACACCTATTCATCCGAGAGCAGGAGCTCCACCTGCTGAGTCACAATCATGCTGGCCTGATGAGAAACAAACTCATCGTTTGCCTCTTCCTCCCATAGCAATCTCAAACTCCTCTCCATTTGCGCATTCGAATTCAGCAGTGACATCTCCTTCAGTGCCTAGGAGTCCAGGAAGGACAGAGACTCCAGCAAGCCCAGGTTCACGCTGGAAAAAGGGGAAGCTATTGGGTCGGGGCACATTTGGGCACGTATATGTTGGTTTTAATAGTGAAAGTGGAGAGATGTGTGCAATGAAGGAGGTCACGTTATTTTCTGATGATGCAAAGTCTAAGGAAAGTGCTAAACAATTAATGCAGGAAATTGCTTTACTGAGTCGTTTGAGGCATCCCAACATTGTGCAGTATTATGGTTCGGAAGCAGTGGGTGATAAATTCTATATATATCTGGAATATGTATCTGGTGGTTCCATTTATAAATTACTTCAAGAGTATGGGCAATTTGGGGAACTAGCAATTCGTAACTATACTCAACAAATACTATCAGGACTTGCGTATTTGCATGCTAAAGCTACGGTGCACAGGGATATTAAAGGAGCCAACATACTTGTTGACCCAAATGGTAAAGTTAAATTGGCAGACTTTGGGATGGCGAAGCATATCACCGGCCAATCATGTCCACTATCGTTTAAGGGCAGCCCTTACTGGATGGCACCTGAGGTCATAAAGAACTCAAATGGTTGCAACCTTGCCGTTGATGTTTGGAGTCTTGGATGTACTGTTCTGGAGATGGCTACTACAAAGCCACCCTGGAGCCAGTATGAAGGGGTTGCTGCGATGTTTAAGATTGGTAATAGCAGAGAGCTCCCAGTAATTCCAGAGCACCTCTCAGATGATGGGAAGGATTTTGTGAAACTATGTCTGCAACGAAACCCACATCATCGACCTACAGCTGTTCAACTCTTGGAGCATCCTTTTGTCAAAAACGCAGCACCTGTAGAGAGGCCTATTTTGAGCTCTGAGCCTTCGGATACAACTCCAGGAGTTACAAACGGAGTGAAGATTTTGGGTATTGGTCAATCACGGACTACTTCTATGGACTCGGATAGTAGACTTGCAGTTCATTCTTCAAGAGTCTCAAAAGCTGCTCTTCATGCCAGTGAAATCAATATTCCCAGAAACATATCATGTCCTGTTTCACCAATTGGAAGCCCTCTTTTGCATTCACGATCCCCTCAACATCCCAGTGGAAGAATGTCTCCTTCACCTATTTCAAGTCCTCGAACCACTTCGGGCTCGTCCACACCTTTGACAGCATGTGGTGGTGCAATTCCTTACAACCACCTGAAACAAGCTATATTTTTGCAAGATGGATTCGGAAGCATGCCAAAGTCCTTAAATAGTAGTCCATACAGCAGCGGTATCTCATTCCACGACTCAAATCCCGATATTTTTCGAGGGTTGCAGCCTGGGGCTCACATCTTCTCTGAAATGATACCAGAAAACGATATCTTGGGAAAGCAGGTTGGACGGCCTGCTTATGGTGAGTTGTATGATGGCCAGCAGGTCCTGGCTGACCGAGTATCTCGTAAGCTCTTACGGGATCATGTTAAAACAAACCCTTCTCTTGATTTGAGTCCTAGCGCTACATTGTCTGGCCGCATGAATGGAGAGATGGAAAAGAGAAAGCGAATAGTTAGAATTGCAGAGGGAAGTGCAAATTTGGGGTGTCAACAGAACGATAGTGCTGACTGGGCAGGCCAGAAAAACCCAAGAGATACGAGGAAAATGAGAGGCAAGGCAAAATAA 2826 45.12 MPSWWGKSSSKEVKKKTSKESFIDSLHRKFKNSPEGKVNSRSGSSRKCGGDTISEKGSKSPISRSPSPSKEVARCQSFAERSCSHKLPLPDLHPVGVGRTDSGISATAKSKLERSSKTSLFLPLPRPACIRSRPDPADLDGDLVTGSVFGESSSDSDDPSDSRQRSPQATDYDIGARTVIGSTEASETLKDQSPTVVQINLKEGKKLESLPFPHKNSSIPKRRPLSSNVTNLQVPRHGAFFSAPDSSMSSPSRSPMRIFSTEQVMNAAVWAGKSHPDVILAGSGPCSSPGSGHNSGHNSMGGDMAGHFFWQQSRGSPEYSPVPSSRMTSPGPSSRIQSGAVTPIHPRAGAPPAESQSCWPDEKQTHRLPLPPIAISNSSPFAHSNSAVTSPSVPRSPGRTETPASPGSRWKKGKLLGRGTFGHVYVGFNSESGEMCAMKEVTLFSDDAKSKESAKQLMQEIALLSRLRHPNIVQYYGSEAVGDKFYIYLEYVSGGSIYKLLQEYGQFGELAIRNYTQQILSGLAYLHAKATVHRDIKGANILVDPNGKVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDVWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSRELPVIPEHLSDDGKDFVKLCLQRNPHHRPTAVQLLEHPFVKNAAPVERPILSSEPSDTTPGVTNGVKILGIGQSRTTSMDSDSRLAVHSSRVSKAALHASEINIPRNISCPVSPIGSPLLHSRSPQHPSGRMSPSPISSPRTTSGSSTPLTACGGAIPYNHLKQAIFLQDGFGSMPKSLNSSPYSSGISFHDSNPDIFRGLQPGAHIFSEMIPENDILGKQVGRPAYGELYDGQQVLADRVSRKLLRDHVKTNPSLDLSPSATLSGRMNGEMEKRKRIVRIAEGSANLGCQQNDSADWAGQKNPRDTRKMRGKAK 941
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8598472 8607114 - CePI673135_05g009830.1 Cec05g0983 202786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g0983 941 MobiDBLite consensus disorder prediction 285 412 - -
Cec05g0983 941 MobiDBLite consensus disorder prediction 313 340 - -
Cec05g0983 941 ProSiteProfiles Protein kinase domain profile. 410 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g0983 941 FunFam Mitogen-activated protein kinase kinase kinase 408 691 - -
Cec05g0983 941 MobiDBLite consensus disorder prediction 103 117 - -
Cec05g0983 941 SMART serkin_6 410 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g0983 941 MobiDBLite consensus disorder prediction 912 926 - -
Cec05g0983 941 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524(InterPro)
Cec05g0983 941 Gene3D Transferase(Phosphotransferase) domain 1 408 685 - -
Cec05g0983 941 MobiDBLite consensus disorder prediction 741 777 - -
Cec05g0983 941 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 43 670 IPR050538 -
Cec05g0983 941 MobiDBLite consensus disorder prediction 910 941 - -
Cec05g0983 941 MobiDBLite consensus disorder prediction 377 403 - -
Cec05g0983 941 CDD STKc_MEKK1_plant 409 666 - -
Cec05g0983 941 Pfam Protein kinase domain 411 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g0983 941 MobiDBLite consensus disorder prediction 745 777 - -
Cec05g0983 941 MobiDBLite consensus disorder prediction 16 176 - -
Cec05g0983 941 SUPERFAMILY Protein kinase-like (PK-like) 408 755 IPR011009 -
Cec05g0983 941 MobiDBLite consensus disorder prediction 16 35 - -
Cec05g0983 941 MobiDBLite consensus disorder prediction 36 72 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1224 Cec-Chr4:31766434 Cec05g0983 Cec-Chr5:8598472 1.40E-117 dispersed
Cec04g1353 Cec-Chr4:33166806 Cec05g0983 Cec-Chr5:8598472 7.70E-96 dispersed
Cec05g0983 Cec-Chr5:8598472 Cec08g1606 Cec-Chr8:27519636 1.60E-88 dispersed
Cec03g0914 Cec-Chr3:12074021 Cec05g0983 Cec-Chr5:8598472 1.10E-63 transposed
Cec11g1834 Cec-Chr11:32501675 Cec05g0983 Cec-Chr5:8598472 3.90E-53 transposed
Cec01g0458 Cec-Chr1:4732728 Cec05g0983 Cec-Chr5:8598472 0.00E+00 wgd
Cec10g2213 Cec-Chr10:36550027 Cec05g0983 Cec-Chr5:8598472 6.40E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71998 PF00069 Pkinase 3.30E-71 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g0983 K20717 - csv:101214961 1600.1