Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1000 ATGGCGGCCGGCCTCTCCGCCGCCTTAGTGCCCAAACCACTCCATCTCTTCCTTACTTCCTCCCATCTCTCCCCTAAACCTCGAACTCCGTTTCTGTTTCCACCTCCTGTCTTCCGGAACAGTAGATTCCAATGGAAGATGCGGAGAAAAACTCTGTTCACTGTCTGTGTACTCGTTGAGGATCAAAATAGTTCCGGTGAGGTGGAGAATCTCTCCGATGAAGGATCGCCGATTGTAATCCCTCAGATCCCATCGCCTCATGTTTCAGAAAGATTAGCAAGGAAGAAATCGGAGCGCTTCACTTATCTTGTTGCTGCGGTTATGTCTAGTTTTGGAATTACCTCCATGGCTGTCATGGCGGTTTACTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCTGTTGGTGCCGCTGTCGGGATGGAGTTCTGGGCGAGATGGGCTCATAGGGCTCTCTGGCACTCTTCCTTATGGCATATGCACGAGTCGCACCATAAACCAAGAGAAGGACCGTTCGAATTGAACGATGTTTTCGCCATTGTCAACGCTGTGCCCGCCATAGCTCTTCTTTCTTACGGCTTCTTCCATAAAGGCCTTGTTCCTGGTCTCTGCTTCGGCGCTGGCCTTGGAATTACGGTCTTCGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCATAAAAGATTCCCTGTGGGTCCCATCGCCAACGTCCCCTATTTCAGAAAGGTCGCTGCTGCTCACCAGCTTCACCATTCAGACAAGTTCAACGGTGTGCCATATGGGCTGTTTTTGGGTCCGAAGTTTCTTCCTGCCGATGCGGCCACAGTCATCTCCTCCATTGCCACAGTATGTGAAGATCTCTCCCTCTCTCCGTTTTTTCACGAGTTATGCAGAAATTTCGGACTGAAAACCAAGCAGTTTAGTGCCGAAATGGGTCCACCGGAATTTCATAATAAGGTCGGTGAAAAGTTTCTTCTCTTTGATTAA 1026 49.42 MAAGLSAALVPKPLHLFLTSSHLSPKPRTPFLFPPPVFRNSRFQWKMRRKTLFTVCVLVEDQNSSGEVENLSDEGSPIVIPQIPSPHVSERLARKKSERFTYLVAAVMSSFGITSMAVMAVYYRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHSSLWHMHESHHKPREGPFELNDVFAIVNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKFLPADAATVISSIATVCEDLSLSPFFHELCRNFGLKTKQFSAEMGPPEFHNKVGEKFLLFD 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8775540 8781808 - CePI673135_05g010000.1 Cec05g1000 202803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1000 341 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 6 281 IPR045019 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016119(PANTHER)|GO:0016123(PANTHER)|GO:0016491(InterPro)
Cec05g1000 341 Pfam Fatty acid hydroxylase 149 277 IPR006694 GO:0005506(InterPro)|GO:0008610(InterPro)|GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0233 Cec-Chr1:2323954 Cec05g1000 Cec-Chr5:8775540 7.60E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1000 K15746 - csv:101212140 548.895