Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g1048 | ATGGTATGCAGCTACAATATAAGGAATGTGATTGCTCAGGCTGGACGTATAGGAATAATCAATAGACGGTTCCAAATCAACAATATCTGGAGGAGTTTGCCTTCCAATCTTGGATTTGTTCACACCTGGAAGCGTGAATATAGAACAAGTCTCATGATGATGGTAGATACGGGTGCATCGGAAAATCGTGGGCCGGTTGTTGATAAGCATCCAGAGAAAGATGAAGATGGTGGCTATACTAGTGGAGGGTGGAAAAGTGAAGATGGGAAACTTAGTTGGGGGTATTCAAGTTTCAGAGGGAAGAGGGCAACCATGGAAGATTTCTTTGATATTAAAATGTCGAAGGTCGATGGTCAAACTGTCTGCCTTTTTGGCATCTTTGATGGTCACGGTGGATCACGAGCTGCAGAGTTTTTGAAGGACCATCTCTTTGAGAATCTGATGAAGCACCCAAAATTTTTGATGGATACCAAATTAGCTATCAGTGAAACATATCAACAGACGGATGCTGAATTTTTAAATTCGGAAAAGGATACTTTAAGGGACGATGGCTCTACTGCTTCAACAGCTTTGCTGGTTGGCAATCATCTCTATGTTGCCAATGTTGGAGATTCACGTACTATTATATCGAAGGGGGGTGAAGCGATCCCTCTTTCCGAGGACCATAAACCAAACAGAACTGACGAGCGGAGGAGAATTGAAAATGCTGGGGGTGTTGTCATGTGGGCTGGCACTTGGAGGGTAGGAGGAGTGTTAGCAATGTCCCGCGCTTTCGGTAACAAGATGTTGAAGCAGTTTGTTGTGGCGGATCCTGATATTCAGGATCTTGAAGTAGACAAGGACATCGAGTTGCTTGTTCTCGCAAGTGATGGACTTTGGGACGTGGTATGCAACGAGGATGCAGTATTAGTTGCAGGGAAGGAAGATGAACCGGAGGCAGCTGCTCGGAAGCTAACTGAAGCAGCGTTTACCCGTGGTAGCGCTGACAATATAACATGCATCGTGGTGAAGTTTCATCATGACAATGCAGGTCCTGCTGCGGATACTCGAGAAAACAACTAA | 1062 | 45.01 | MVCSYNIRNVIAQAGRIGIINRRFQINNIWRSLPSNLGFVHTWKREYRTSLMMMVDTGASENRGPVVDKHPEKDEDGGYTSGGWKSEDGKLSWGYSSFRGKRATMEDFFDIKMSKVDGQTVCLFGIFDGHGGSRAAEFLKDHLFENLMKHPKFLMDTKLAISETYQQTDAEFLNSEKDTLRDDGSTASTALLVGNHLYVANVGDSRTIISKGGEAIPLSEDHKPNRTDERRRIENAGGVVMWAGTWRVGGVLAMSRAFGNKMLKQFVVADPDIQDLEVDKDIELLVLASDGLWDVVCNEDAVLVAGKEDEPEAAARKLTEAAFTRGSADNITCIVVKFHHDNAGPAADTRENN | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 9171551 | 9175669 | - | CePI673135_05g010480.1 | Cec05g1048 | 202851 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g1048 | 353 | ProSiteProfiles | PPM-type phosphatase domain profile. | 92 | 338 | IPR001932 | - | |
Cec05g1048 | 353 | SMART | PP2C_SIG_2 | 90 | 338 | IPR001932 | - | |
Cec05g1048 | 353 | MobiDBLite | consensus disorder prediction | 60 | 83 | - | - | |
Cec05g1048 | 353 | FunFam | Probable protein phosphatase 2C 76 | 84 | 344 | - | - | |
Cec05g1048 | 353 | CDD | PP2Cc | 94 | 338 | IPR001932 | - | |
Cec05g1048 | 353 | Gene3D | - | 84 | 343 | IPR036457 | - | |
Cec05g1048 | 353 | ProSitePatterns | PPM-type phosphatase domain signature. | 123 | 131 | IPR000222 | GO:0043169(InterPro) | |
Cec05g1048 | 353 | PANTHER | PROTEIN PHOSPHATASE | 78 | 337 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cec05g1048 | 353 | MobiDBLite | consensus disorder prediction | 63 | 81 | - | - | |
Cec05g1048 | 353 | Pfam | Protein phosphatase 2C | 96 | 331 | IPR001932 | - | |
Cec05g1048 | 353 | SMART | PP2C_4 | 82 | 336 | IPR001932 | - | |
Cec05g1048 | 353 | SUPERFAMILY | PP2C-like | 88 | 339 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g1048 | Cec-Chr5:9171551 | Cec05g1772 | Cec-Chr5:29554023 | 1.10E-93 | dispersed | |
Cec05g1048 | Cec-Chr5:9171551 | Cec05g1054 | Cec-Chr5:9250624 | 6.50E-35 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g1048 | K17506 | - | csv:101203681 | 688.723 |