Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g1054 | ATGTGCGATCCCACTACCATGATTAAAACCAAGAATGCTTGCCGGAGACGGCTGAGAGTTCGTAAACTGAGGTACAAATGGCAGAGGATGGTGCACGCGGCGGAGGAAGGTGAGGGCAATGAATTAAGTGATAATGGAGTTTCCAAATCGAATTGTGATCAAGTACTAGTCTCTGAGAAGGAATCGTCTTCGGCGTTGGACTGTCGAGTGTATAGCGAGATGTCGATTATAGGGCGGAGGAAGGAGATGGAAGATGAAGTGAGAGTGGAATTGGGATTGACTACGATTAATGATGAGAAGTACAATTTCTTCGCCGTGTACGATGGACACGGCGGCGCTCAGGTGGCGCAGGTGTGCCGTGAACGGTTGCACCGGATTGTGGCGGAGGAGATTGTGGCTCGGGGAGAGATGGATGAGGCGGAGTGGGGGAGGTTGATGGAGAGGTGCTTTGAGAGAATGGACGAAGAAGTGAATAGCGGCGCCGCCACGATGAAGACGATCGGATCGGCGGTTGTTACGGCGGTGATCGGAAAGGAAGAGGTGGTGGTGGCCAATTGCGGCGATTGTCGAGCCGTTTTGGCTAGGGATGGTATTGCGTTGCCCTTGTCTAACGATCATAAGCCTGGTAGAGCTGATGAGTTGAAGAGAATTGAATCTGCCGGTGGAAGGGTCATAAATTGGAATGGCTACCGGGTGCTAGGAGTTCTTGCCACTTCAAGATCCATCGGTGATGAATATCTCAAACCATTTGTTATCTCCAAACCAGAAGTGACTGTGACCAAGCGAACTGACAACGATGAGTTCCTCATATTAGGAAGTGATGGTCTTTGGGATGTTGTTTCGAATGAAATTGCCTGCAACATAGTGAGGAGATGTTTTGGAGGCAAAATGAAGAGGATTTCGTTGAAGGTGGCGAACGACAGCCATGTCGCAGAAGCTGCAGCAGTGTTGGCGGAGCTCGCTGTGGCTCGTGGAAGCAAGGACAACATCAGTGTAATAGTAGTAGATTTGAGGAAACCAAACCATTGCTCTCCATGA | 1038 | 49.9 | MCDPTTMIKTKNACRRRLRVRKLRYKWQRMVHAAEEGEGNELSDNGVSKSNCDQVLVSEKESSSALDCRVYSEMSIIGRRKEMEDEVRVELGLTTINDEKYNFFAVYDGHGGAQVAQVCRERLHRIVAEEIVARGEMDEAEWGRLMERCFERMDEEVNSGAATMKTIGSAVVTAVIGKEEVVVANCGDCRAVLARDGIALPLSNDHKPGRADELKRIESAGGRVINWNGYRVLGVLATSRSIGDEYLKPFVISKPEVTVTKRTDNDEFLILGSDGLWDVVSNEIACNIVRRCFGGKMKRISLKVANDSHVAEAAAVLAELAVARGSKDNISVIVVDLRKPNHCSP | 345 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 9250624 | 9252696 | - | CePI673135_05g010540.1 | Cec05g1054 | 202857 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g1054 | 345 | SMART | PP2C_4 | 55 | 335 | IPR001932 | - | |
Cec05g1054 | 345 | Pfam | Protein phosphatase 2C | 72 | 330 | IPR001932 | - | |
Cec05g1054 | 345 | ProSitePatterns | PPM-type phosphatase domain signature. | 103 | 111 | IPR000222 | GO:0043169(InterPro) | |
Cec05g1054 | 345 | PANTHER | PROTEIN PHOSPHATASE | 57 | 336 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cec05g1054 | 345 | FunFam | Protein phosphatase 2C 50 | 61 | 344 | - | - | |
Cec05g1054 | 345 | SUPERFAMILY | PP2C-like | 61 | 339 | IPR036457 | - | |
Cec05g1054 | 345 | ProSiteProfiles | PPM-type phosphatase domain profile. | 70 | 337 | IPR001932 | - | |
Cec05g1054 | 345 | Gene3D | - | 65 | 343 | IPR036457 | - | |
Cec05g1054 | 345 | CDD | PP2Cc | 69 | 337 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0913 | Cec-Chr5:7901160 | Cec05g1054 | Cec-Chr5:9250624 | 7.10E-65 | dispersed | |
Cec05g1054 | Cec-Chr5:9250624 | Cec07g1505 | Cec-Chr7:30647043 | 7.00E-58 | dispersed | |
Cec05g1048 | Cec-Chr5:9171551 | Cec05g1054 | Cec-Chr5:9250624 | 6.50E-35 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g1054 | K14497 | - | csv:101214188 | 572.392 |