Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1097 ATGCGATTGTCGTCGGAATCAGTTTCGTCGTCATTGAAGCAGAGTGGGAATCGGTCTGGGTCTAGGCTTAAGAAGAAGCACAAGAGGCTTGATGCCATATGCGAGAAAGAGTATAGTAGAAACCACGGCGATGTGAATGAGAATGTTAGTGGGTTGGGGACTGGGGAGGCTGACCTTGGGCTTCGACGGAGCAGCCGTGTTCGTCGGGCCCCAGTCTTGCTTGATGCTTCCCCTATGCCAAGGAAGAAGCGGCGGATGGTTCATGGGAATGGAACTTTAGGTGTTAAAACGAGTGCTAACACTCTGCCGCAGTTGAGAGATGATTTGAATGATGAGGCACAGGGGAATTGGAGTTCGAGGTTGAGATCAAGGAACCAAAATTTGGGGATTAGAGTGGACAAAGGTGCTCGGGCTAGCAGGAAAAGGAAACTTTTTGATGAAATTATTAATGTGGAAGTAAGAAGTAGTGTAATGAGGATGGATTTGGATGAGGCAAAAGGAAAAATGGAATACGGGGAATCTATGGTTGGAAGGTCTAACAGATTGACGAGGAGGTTTGGAGTGACGAATGATCCAATTAAAACAGAAAAGGAGGTGAAGTCTCCTCAAATTAAGGATGATTGTTGCAGGGAAGACATTTTGGAAATCAATAATGAAGATACGGAGGAGGAGGAAGAAGAAGAAGGGGAGGAAGAAGAAGGAGAAGGAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGTGGTGGTGGAGGGCAAAGAAGGCACGATTGCTGACAATGAGAGAGGGGAGGGTGTTTTGCCTTTGGAAAATGAAATGGATGATGAAAATGTGAAGGCAGTGGATGATGCTGTTACTCAGGTTGTTGAAAAATTGGACAAAGAAACTTTGAATTCTTTGCATGTAGATGAGGCTTGTAGTGGTGATCATAATGAAGAACCAGCCAATGTGGTGGAGAATGCAAACAATGGTGAGATACAGCTAGAAGAATTAACACAGCTAAATGAAGGTGTGAATGAAATTCATGATGTAGAAGCTGCTGTAGTTTCAACAAATGAAGTGGTAGGTGGAAGGTCTTGCAATGAGAAAGCTGTTGATTTGGGCAAGTTTGCTGAAAAATCTAGGCAAGATGGTGTTGATTTAAATTTAAAGAAGTTTGCAGACAGTTCCACAGGTATGTTGGGTAAGGCTCACATTAAAGAGGGCAGAAGGTGTGGATTGTGTGGAGGAGGAATTGATGGTAAGCCTCCCAAGAAGTTGGTCCAAGATTCTGGTGAGAGTGAAAATGAAACATGTAGTGGCTCTTCAGCTTCAGAGGAACCAAATTATGACAAGTGGGATGGTTTTGGCGATGAACCTGGATGGCTTGGACGCCTCTTAGGTCCTATTAATGATCGTTATGGCATTGCTGGTATATGGGTCCATCAACACTGTGCAGTTTGGAGCCCCGAGGTTTATTTTGCTGGATTGGGATGCTTGAAAAATGTAAGGGCTGCTCTTTGCAGGGGAAGAGCATTAAAATGCACTCGGTGTGGGAGACCTGGAGCAACCATCGGATGTCGTGTTGATCGATGCCCAAAAACTTACCACTTGCCTTGTGCACGTGCTAATGGTTGCATATTTGATCACCGCAAATTTCTCATAGCTTGCACAGATCATCGCCACATCTTCCAACCTCACGGTAATCAATATTTAGCTCGTATAAAGAGATTAAAGGCCAAGAAAATGAAATTGGAAATAAAAAAGCAATCAAATGATGCTTGGCGAAGGGATATTGAGGCTGAAGAAAAGTGGCTGGAGAACTGTGGGGAAGATGAAGAGTTTTTGAAAAGAGAGAGTAAGAGACTTCATCGAGATTTGGTAAGAATTGCACCTGTATATATTGGTGGGTCAAACTCAGAAGGAGAGAACTTGTTTCATGGTTGGGAGTCAGTTGCTGGGCTTCAAGGTGTCATCCAATGTATGAAAGAAGTAGTATTCTTACCACTTTTGTATCCTGAGCTTTTTGATCGCTTTGGGATCACACCTCCTAGAGGTGTTCTTTTGCATGGATATCCTGGAACTGGTAAAACACATGTTGTTCGAGCACTGATTGGTTCTTGTGCTCGTGGAGATAAACGGATAGCATATTTTGCTCGTAAAGGAGCGGATTGCTTAGGGAAATATGTTGGTGATGCAGAACGTCAGTTAAGACTTCTGTTTCAAGTTGCAGAGAAATGCCAACCTTCTATTATATTTTTTGATGAGATAGATGGATTGGCACCTTGTCGTACAAGGCAGCAAGATCAAACGCATAATTCAGTTGTGTCTACATTGCTTGCTCTATTAGATGGTCTAAAATCTCGGGGGTCTGTTGTAGTTATTGGTGCCACAAACCGCCCTGAGGCAGTTGATCCAGCTTTAAGGAGGCCTGGGAGATTTGACCGGGAGATTTATTTTCCTTTGCCATCGGTTGAAGATAGGGCTGCTATTCTCTCCCTTCACACTCAAAGGTGGCCAAAGCCAGTTGATGGACCCTTGCTCCAGTGGATTGCTAGAAAAACTGCAGGCTTTGCTGGTGCTGATCTTCAGGCTCTCTGTACCCAAGCAGCCATGAGTGCTTTGAAAAGAAATTTTCCTCTTAAAGAAGTCCTGTCAACTTCTGGGGAACAAGTTTTGAGAGATAACCACCCTCCTCTTCCGTCCATTTTAGTGGAGGAGCGAGATTGGTTAGAAGCTTTATTATATTCTCCACCTCCATGCTCACGTAGAGAAGCAGGGATGGCTGCTAATGATGTGGCATCTTCTCCTCTTCCCTTCCATCTCATTCCTTGTCTGCTTCAACCACTGTCAACTTTACTTGTTTCCCTTTATCTTGATGAACGCGTCTGCTTGCCAACTAATCTTTTCAAAGCTGCAACTTTAATTAAAAGTGTCATTGTTAGTGCTTTGGATGGAAGGAAAATTGTCACTAGTTTCTGGTGGTCGCATGTTCATGATTTTGTTCAGGATGCTGATATTGCAAATGAGATAGAGGTAAAGCTGCAGGGTTCTGGAGTGTTACTTGAGGATTCTACTTTTGGTGGTTCTGGTGTTCTCAACAACACAAGCAGTGAAGGTTCCAAGTTTGAAAATGTAGGTCATCATGGTGGCCCACCCTCTACCGTGGTAGAGCACACATCATTCACCTGGGGAAATAAGTCTGGCTTTCGAATTTTGATTGCTGGGAATCCCAGATCTGGACCAAGGCATCTTGCCTCTTGTCTTCTTCACTGTTATATTCAACATGTTGAAATTCGAAAGGTTGATATAGCTACAATTTCACAAGATGGTCATGGTGATTTGGTGCAAGGCATATCACAAATATTGTTGAATTGCTCTAGCATGGGGTCGTGTCTGGTGTTCATGCCAAGAATTGACTTGTGGGCTATTGAGACACAAAGTCAAACGTCTGAGGAGTGTGATTTTTATCTGAATGAGGATCAGAATCTTGAGGATGGAAATATTGTCAAAGACGCCCACCTTGGTGGAAGGGAAAACCATGGTTATTCAGACCAAAGCAAATCAACTAAGAGGACTGGACTTCAAGACGATTCTCTGTCTAGTGCTTCATATGCTTGGAGTTCATTTGTTGAGCAAGTTGAATCGCTATCTACACCCTTGATGATTTTGGCCACATCAGAAGTTCCATTTTTGCTACTTCCACAAGAGATAAGGCAGTTCTTCAGGAATGACTTGTCAATTTGTCGGCCAACTACTTCGGAGCATTCGGTACCTAGGTTCTCTGTCCAGATTGATGGAGTTTTCGACCATGACATGGTAATCAATCATTCTGCTGCAGAATTATCAAGGGACATAGTGAAACTGCTTGTTCATTTGATTCACCAAAAGTCTCACACCAAAACATCCGCATGCACAAATAACCAAGTTTCTGTAATCCAAGGTGAGAGTAATGCTGCAAATCAGCAAATAGATAAAGGAACTGCCAGCGAGCACAATGGAGAAAAGAAGTCTCCTGATGTGTCTTCTCTTAGAATTGCACCACTACCTGGCAGTAAAACCATGAGAGTGAAATCAAACTTGATTTCAGTAATATCTACTTTTGGCTATCAAATTCTGCGATACCCCCATTTCGCTGAGCTTTGTTGGGTGACATCAAAGTTGAAAGAAGGCCCCTACGCAGACGTTAGTGGACCCTGGAAGGGATGGCCATTCAATTCTTGTATTATTCGCCCGATGAGCACATTGGAGAAGGTAGCATCAAGCAGCTTGAGTAATGGAAAATCTAAAGAAATTTCGGGTTTGGTAAGAGGCTTGATTGCTGTTGGTTTATCAGCAATCAGAGGTGCCTACACATCCTTAAGGAAAGTCTCTTTTGATGTGCGATTGGTACTTGAACTCCTAGTTGAACAGATAAATGCAAAAATTAATTCCGGGAAAGACCAGTATCAATATTTTCGCCTTCTATCACAAGTTGCTTATCTGGAAGATGTAGTTAATAGCTGGGCCTTCACTCTGCAAAGCTTAGAACATGACTCGAGAACAACGGAAACGTCAAAGAATCACACTTCTGGTGGTAATGAGATTCAGTGTGAGAAAAACGAACCCATTATATCCAACAAAGGCTCTCTTACAAATGAAATTCCAGAAGTCAGTTGTCAGGAACCTGCTGTTGAGGAGGAAGTTGTAGCCATTGATTCCTTGGTAGATGGAGATTTGAATCATTCTAATTCCAAGGATACTACATTCGTATCAGGACATGGAGAGAGGAATTTTGGCATAAAAAATTCAGTCTCTAACGAGTCCCATGACAATGCTGCTGCTGTTGACCAATTAGCTGAAAATATTCCATTGAAGCACAATGAGACAACAGTAGTTGCACCGGACAATTTGAACAATGATAGAAACGGCAAATCGGTTAAAGCACCATTAAATTTGGGAGCAGAATCAATAGTCAATTTGGAACATAATCATCCAAATTCAAGTGAGTTATGTCGTGATGAAATGCTGAGCTGCCCAAAACCCTGCGGCAACAGTAATGAAGGTTCCGCCTTAGAAAATGGTTGCAAACGTGACAATAGTAAGCCCGACTCAAATGACCGTGAAGTGAATGCTCACTCCTCTCTGAGCAGAACTGGCCTCTCTACCAACTCTGCACTAGTATGCTCTATTCGGTGCTGCACTGGTTGTTTAAACGTCCTCTACAGCGTGACAAAAACTATTATTCGCAATGAATTGGGATCAAATCGAAATAATTGGACTGTAGAGGATGTTCATGATATTGTTGTGGCACTTTCAGTTGACCTTCTTGCAGCAGTAAGACGGGCATTTCTTGATGGAAACGACACTCGTGTATTTGACAATAGACAAATGGGAGGAAATGACAGGTTTAAATCTTCGGACTCGAGAAGTTGTGATTGCAAAAGTTCAAAAGACATGGTATTTAAGGGAGTGGAATGTATTTGTCACTGTGAAAACGAAAGTTTGAGTGAAAAAGAAAAGGCCTCTCCTTATTCTGAAATGGGGATTGACCCCAACTTTATATTCAGAGATGGTGTATTGGTTAGTGTAGATCCCAAAAAGAATGCTTCGTTTCATTGTAAATTGGAGACTTTGTGCCTCTGTTCTCTTACAGAGTTGATAGTAATGGCAAATAAGCCTTTAAATTGA 5667 42.72 MRLSSESVSSSLKQSGNRSGSRLKKKHKRLDAICEKEYSRNHGDVNENVSGLGTGEADLGLRRSSRVRRAPVLLDASPMPRKKRRMVHGNGTLGVKTSANTLPQLRDDLNDEAQGNWSSRLRSRNQNLGIRVDKGARASRKRKLFDEIINVEVRSSVMRMDLDEAKGKMEYGESMVGRSNRLTRRFGVTNDPIKTEKEVKSPQIKDDCCREDILEINNEDTEEEEEEEGEEEEGEGEEEEEEEEEEEEEEEEVVVVEGKEGTIADNERGEGVLPLENEMDDENVKAVDDAVTQVVEKLDKETLNSLHVDEACSGDHNEEPANVVENANNGEIQLEELTQLNEGVNEIHDVEAAVVSTNEVVGGRSCNEKAVDLGKFAEKSRQDGVDLNLKKFADSSTGMLGKAHIKEGRRCGLCGGGIDGKPPKKLVQDSGESENETCSGSSASEEPNYDKWDGFGDEPGWLGRLLGPINDRYGIAGIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRPGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHIFQPHGNQYLARIKRLKAKKMKLEIKKQSNDAWRRDIEAEEKWLENCGEDEEFLKRESKRLHRDLVRIAPVYIGGSNSEGENLFHGWESVAGLQGVIQCMKEVVFLPLLYPELFDRFGITPPRGVLLHGYPGTGKTHVVRALIGSCARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHNSVVSTLLALLDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSVEDRAAILSLHTQRWPKPVDGPLLQWIARKTAGFAGADLQALCTQAAMSALKRNFPLKEVLSTSGEQVLRDNHPPLPSILVEERDWLEALLYSPPPCSRREAGMAANDVASSPLPFHLIPCLLQPLSTLLVSLYLDERVCLPTNLFKAATLIKSVIVSALDGRKIVTSFWWSHVHDFVQDADIANEIEVKLQGSGVLLEDSTFGGSGVLNNTSSEGSKFENVGHHGGPPSTVVEHTSFTWGNKSGFRILIAGNPRSGPRHLASCLLHCYIQHVEIRKVDIATISQDGHGDLVQGISQILLNCSSMGSCLVFMPRIDLWAIETQSQTSEECDFYLNEDQNLEDGNIVKDAHLGGRENHGYSDQSKSTKRTGLQDDSLSSASYAWSSFVEQVESLSTPLMILATSEVPFLLLPQEIRQFFRNDLSICRPTTSEHSVPRFSVQIDGVFDHDMVINHSAAELSRDIVKLLVHLIHQKSHTKTSACTNNQVSVIQGESNAANQQIDKGTASEHNGEKKSPDVSSLRIAPLPGSKTMRVKSNLISVISTFGYQILRYPHFAELCWVTSKLKEGPYADVSGPWKGWPFNSCIIRPMSTLEKVASSSLSNGKSKEISGLVRGLIAVGLSAIRGAYTSLRKVSFDVRLVLELLVEQINAKINSGKDQYQYFRLLSQVAYLEDVVNSWAFTLQSLEHDSRTTETSKNHTSGGNEIQCEKNEPIISNKGSLTNEIPEVSCQEPAVEEEVVAIDSLVDGDLNHSNSKDTTFVSGHGERNFGIKNSVSNESHDNAAAVDQLAENIPLKHNETTVVAPDNLNNDRNGKSVKAPLNLGAESIVNLEHNHPNSSELCRDEMLSCPKPCGNSNEGSALENGCKRDNSKPDSNDREVNAHSSLSRTGLSTNSALVCSIRCCTGCLNVLYSVTKTIIRNELGSNRNNWTVEDVHDIVVALSVDLLAAVRRAFLDGNDTRVFDNRQMGGNDRFKSSDSRSCDCKSSKDMVFKGVECICHCENESLSEKEKASPYSEMGIDPNFIFRDGVLVSVDPKKNASFHCKLETLCLCSLTELIVMANKPLN 1888
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9693612 9702847 - CePI673135_05g010970.1 Cec05g1097 202900

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1097 1888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 462 562 IPR013083 -
Cec05g1097 1888 Gene3D - 822 914 - -
Cec05g1097 1888 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 822 914 - -
Cec05g1097 1888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 648 911 IPR027417 -
Cec05g1097 1888 ProSitePatterns AAA-protein family signature. 791 809 IPR003960 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec05g1097 1888 MobiDBLite consensus disorder prediction 1320 1344 - -
Cec05g1097 1888 FunFam ATPase family, AAA domain-containing 2 646 828 - -
Cec05g1097 1888 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 406 562 - -
Cec05g1097 1888 MobiDBLite consensus disorder prediction 1679 1709 - -
Cec05g1097 1888 MobiDBLite consensus disorder prediction 1174 1194 - -
Cec05g1097 1888 Coils Coil 211 259 - -
Cec05g1097 1888 MobiDBLite consensus disorder prediction 432 446 - -
Cec05g1097 1888 Pfam PHD-like zinc-binding domain 481 560 - -
Cec05g1097 1888 PANTHER AAA DOMAIN-CONTAINING 37 1882 IPR045199 GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0016887(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Cec05g1097 1888 ProSiteProfiles Extended PHD (ePHD) domain profile. 440 560 IPR034732 -
Cec05g1097 1888 MobiDBLite consensus disorder prediction 187 267 - -
Cec05g1097 1888 MobiDBLite consensus disorder prediction 190 215 - -
Cec05g1097 1888 Pfam ATPase family associated with various cellular activities (AAA) 686 821 IPR003959 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec05g1097 1888 SMART AAA_5 682 823 IPR003593 GO:0016887(InterPro)
Cec05g1097 1888 MobiDBLite consensus disorder prediction 424 450 - -
Cec05g1097 1888 Gene3D - 647 821 IPR027417 -
Cec05g1097 1888 MobiDBLite consensus disorder prediction 216 255 - -
Cec05g1097 1888 MobiDBLite consensus disorder prediction 1 18 - -
Cec05g1097 1888 MobiDBLite consensus disorder prediction 1687 1703 - -
Cec05g1097 1888 MobiDBLite consensus disorder prediction 1 28 - -
Cec05g1097 1888 Pfam AAA+ lid domain 847 879 IPR041569 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1097 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1097 Cec-Chr5:9693612 Cec08g0265 Cec-Chr8:5082308 1.20E-241 dispersed
Cec05g1097 Cec-Chr5:9693612 Cec04g1067 Cec-Chr4:30208441 7.70E-50 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g170 . . . . Bpe09g00245 . . Bma13g00940 Cmo16g00439 . . . . . . . . . . . . . . . Cla10g00660 Cam10g0656 Cec10g0680 Cco10g0652 Clacu10g0679 Cmu10g1503 Cre10g0883 . . Cone14ag1047 Cone15ag1035 . . . . . Blo10g00749 . Bda12g00871 . . . . . . . . Cma16g00407 . Car16g00371 Cpe14g00341 . . . . . . . . Cla05g00998 Cam05g1089 Cec05g1097 Cco05g1091 Clacu05g1083 Cmu05g1033 Cre05g1108 . . Chy06g01166 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002378 1 1 1 1 1 2 1 2 3 1 2 2 1 1 3 1 2 2 1 2 3 3 2 2 7 2 1 5 3 1 60