Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1101 ATGAGATCTCTACTGGTCTCAGAGGTGATGGTGGTTAATCTTGTCAAACCGTCTTTCCTCAAATGGATATTATTGAGTTGCCTGCTTTCTTTCTCGCTGGCTCTGAAACAGACTAATAAAGTCTGTGATTCAAAAGATTTACTGGCATTGAGGGGCTTTGTGAATAGCCTTGCAAATAGTTCTGTTCTCTCTGTATGGTTAAATGAATCCAACTGCTGCAATTGGGATGGTGTGGATTGTGGATATGATGGCAACAGCTCGCGCACTAACAGAGTTACCAGGTTAGAACTGCCTAATATGAATCTGAAAGGCAAGATTTCACAATCACTTGGTGGTTTAGATCAGTTAATTTGGCTGAATCTATCATACAATCAGCTTGAAGGTGTATTGCCAACAGAACTCTCAAGCTTGAAGCAACTCCAGGTTTTGGATTTGAGTTACAATAAACTGTCAGGACCAGTCACCAATGCAACTTCAGGATTGAAATCTGTTCACGTTCTGAATATTTCAAGCAATTCATTCATTGGGGATTTTCCCCAGCTTGTGGGTTTTCAAAATCTTGTTGCCTTCAACATAAGTAACAATTCTTTCACGGGCCGGTTAGCTTCACAGATTTGCAATTCCTCCATCATGATTCAGGTTGTTGATATTTCACTGAACCGAATATCTGGAAATCTTCAAGGTTTGGACAATTGCAGCAAATCTCTCAAACATTTTCGTGCAGACAGTAACTTCCTTACTGGCCATCTGCCAGATTCGTTGTATTCATTATCATCCATGGAGTATTTCTCAATCCCTGGGAACAGCTTCTTTGGCCAATTAAGCATGGAACTGAGTAAGCTTTCTAGGCTTAAATCCTTTATAGTATTTGGAAACAAATTTTCTGGTGAACTTCCAAATGTGTTTGGTAATTTTTCAGAACTACAGGAGTTTGTTGCACACTCCAACTTGTTCTCTGGATTATTGCCTTCATCTCTGTCATTGTGCTCAAAGGTCAGAGTGTTTGATCTTAGAAATAATTCTTTAACTGGTACTATAGATCTCAATTTTTCTAGGCTACCAAATCTTCAAATGCTTGATCTAGCCTCGAATCACTTTTCTGGGCCCCTACCAAATTCTCTATCCGATTGCCATGAACTGAAAACTCTTAGCCTTGCCAAAAACAAGTTAACTGGTCAAATTCCTCGAAATTATGCAAAGCTTTCCTCTCTGTCCTTTCTATCTTTGTCAAACAACAGTATCATAGACTTGAGTGGTGCACTATCTATTTTACAAAATTGCAGAAATCTGACTGTTCTTATTCTTACAAAGAACTTTCGTAATGAGGTACTTCCACAGAGTGAAACTGTTTTCAACAACTTGATGCTTTTGGCATTTGGTAACTGTGGTCTGAGAGGACAAATTCCAGGTTGGTTAATAGGTTGCAAGAAATTAAGCATCCTCGACTTGTCTTGGAATCACTTAAATGGAAGTATCCCTGCTTGGATTGGTCAGCTGGAAAATTTGTTTTATTTGGACTTATCCAACAATTCTCTGACAGGAGAAATCCCAAAAAGCTTGACACAGATGAAAGCACTAATTTCCAGACACGGCAGCTTGTCGGGTTCGACATCATCTGCTGGAATCCCCCTTTTTGTCAAACGAAATCAAAGTGCTACTGGTTTGCAATACAACCAAGCGTCAAGCTTTCCACCATCGATTTACTTGAGCTACAACAGAATTAATGGAACTATTTTTCCGGAAATTGGCAGATTAAAATGGCTGCATGTCTTGGATTTGAGTAGGAATAATATTACTGGGCCCATACCGAGCACCATATCAGATATGGAGAACTTGGAAACATTAGATTTGTCGAATAATGAACTTTATGGACAAATTCCACCATCACTCAACAAGCTCACCTTCTTGTCAAAGTTTAGCGTGGCAAATAATCACTTGGAGGGACCAATTCCTAATGGAGGCCAATTCCTAAGCTTTCCCAGCTCCTGCTTTGATGGTAACACAGGACTTTGTGGGGAAATTGACAACCCTTGTCATTCTGTTGATGGGTTAGAAACAAAACCCGAAACCAACAATTACTCAAAGAGAAAAGTTAATAGAAGCATCATTCTTTGCCTTACAGTCGGTGCAGCTGCAGCAATCCTCCTGCTCCTTACAGTGGTTTTACTCAAAATGTCCAGGAAAGATGTTGGAGATCGACGAAATAACAGGTTTGATGAGGAATTTGACAGGCCTGACAGGTTATCTGGAGCTCTTGGATCGTCAAAGTTGGTGCTCTTTCAGAATTCAGAATGCAATGATCTTACAGTTGCAGAGTTGTTAAAAGCTACTTGCAATTTCAACCAAGCGAACATAATAGGCTGTGGTGGATTTGGCCTGGTTTACAAAGCCAGCCTTCCCAATGGTTCAAAAGCTGCAGTCAAGAGGCTTACAGGAGATTGTGGTCAGATGGAACGGGAATTCCAAGCTGAAGTAGAAGCTCTTTCTCGAGCACAGCATAAGAATCTTGTTTCTCTTCAAGGTTACTGCAAACATGGAAATGACAGGCTATTAATTTACTCCTACATGGAAAATGGAAGTTTGGACTACTGGCTTCACGAGGTTGTTGATGATGATTCAATACTAAAATGGGAAGCAAGACTCAAAATCGCACAGGGTGCAGCTCATGGATTGGCTTACTTGCATAAGGAATGTCAGCCCAACATAATCCACCGAGATGTAAAATCAAGCAACATACTTCTAGATGACAGATTTGAGGCTCATTTAGCTGATTTTGGTCTTTCAAGATTACTCCGGCCATATGACACTCATGTTACCACGGACTTGGTTGGGACTTTGGGTTATATTCCTCCTGAATACAGCCAGACATTAACTGCAACTTGCAGGGGTGATGTTTATAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACTGGTCGGAGGCCTGTAGAGGTATGCAAAGGTAAAGCCTGCAGGGATCTGGTGTCTTGGGTGATTCAAAAAAAATCAGAGAAGAGAGAAGAGGAGATTATTGATCCTGCAATTTGGGACACTAATAGCAAAAAACAGATTTTAGAGGTTCTTGGTATTACTTGTAAATGCATAGACCAAGATCCAAGGAAGAGACCTTCGATTGAAGAAGTTTCTTCATGGCTAGATGGTGTTACGTTGTAG 3171 40.4 MRSLLVSEVMVVNLVKPSFLKWILLSCLLSFSLALKQTNKVCDSKDLLALRGFVNSLANSSVLSVWLNESNCCNWDGVDCGYDGNSSRTNRVTRLELPNMNLKGKISQSLGGLDQLIWLNLSYNQLEGVLPTELSSLKQLQVLDLSYNKLSGPVTNATSGLKSVHVLNISSNSFIGDFPQLVGFQNLVAFNISNNSFTGRLASQICNSSIMIQVVDISLNRISGNLQGLDNCSKSLKHFRADSNFLTGHLPDSLYSLSSMEYFSIPGNSFFGQLSMELSKLSRLKSFIVFGNKFSGELPNVFGNFSELQEFVAHSNLFSGLLPSSLSLCSKVRVFDLRNNSLTGTIDLNFSRLPNLQMLDLASNHFSGPLPNSLSDCHELKTLSLAKNKLTGQIPRNYAKLSSLSFLSLSNNSIIDLSGALSILQNCRNLTVLILTKNFRNEVLPQSETVFNNLMLLAFGNCGLRGQIPGWLIGCKKLSILDLSWNHLNGSIPAWIGQLENLFYLDLSNNSLTGEIPKSLTQMKALISRHGSLSGSTSSAGIPLFVKRNQSATGLQYNQASSFPPSIYLSYNRINGTIFPEIGRLKWLHVLDLSRNNITGPIPSTISDMENLETLDLSNNELYGQIPPSLNKLTFLSKFSVANNHLEGPIPNGGQFLSFPSSCFDGNTGLCGEIDNPCHSVDGLETKPETNNYSKRKVNRSIILCLTVGAAAAILLLLTVVLLKMSRKDVGDRRNNRFDEEFDRPDRLSGALGSSKLVLFQNSECNDLTVAELLKATCNFNQANIIGCGGFGLVYKASLPNGSKAAVKRLTGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCKHGNDRLLIYSYMENGSLDYWLHEVVDDDSILKWEARLKIAQGAAHGLAYLHKECQPNIIHRDVKSSNILLDDRFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKACRDLVSWVIQKKSEKREEEIIDPAIWDTNSKKQILEVLGITCKCIDQDPRKRPSIEEVSSWLDGVTL 1056
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9724841 9728011 - CePI673135_05g011010.1 Cec05g1101 202904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1101 1056 FunFam Tyrosine-sulfated glycopeptide receptor 1 350 683 - -
Cec05g1101 1056 PRINTS Leucine-rich repeat signature 502 515 - -
Cec05g1101 1056 PRINTS Leucine-rich repeat signature 609 622 - -
Cec05g1101 1056 SMART serkin_6 780 1051 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1101 1056 Gene3D Ribonuclease Inhibitor 447 536 IPR032675 -
Cec05g1101 1056 Gene3D Ribonuclease Inhibitor 43 160 IPR032675 -
Cec05g1101 1056 ProSiteProfiles Protein kinase domain profile. 780 1051 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1101 1056 FunFam Leucine-rich repeat receptor-like protein kinase 856 1056 - -
Cec05g1101 1056 SUPERFAMILY L domain-like 317 672 - -
Cec05g1101 1056 Pfam Protein kinase domain 781 1047 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1101 1056 ProSitePatterns Serine/Threonine protein kinases active-site signature. 902 914 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1101 1056 ProSitePatterns Protein kinases ATP-binding region signature. 786 808 IPR017441 GO:0005524(InterPro)
Cec05g1101 1056 Pfam Leucine rich repeat N-terminal domain 44 80 IPR013210 -
Cec05g1101 1056 ProSiteProfiles Leucine-rich repeat profile. 403 425 IPR001611 GO:0005515(InterPro)
Cec05g1101 1056 Pfam Leucine rich repeat 567 622 IPR001611 GO:0005515(InterPro)
Cec05g1101 1056 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515(InterPro)
Cec05g1101 1056 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 251 346 - -
Cec05g1101 1056 FunFam Nuclear pore complex protein NUP107 43 184 - -
Cec05g1101 1056 Gene3D Phosphorylase Kinase; domain 1 750 855 - -
Cec05g1101 1056 Gene3D Ribonuclease Inhibitor 567 678 IPR032675 -
Cec05g1101 1056 Pfam Leucine Rich Repeat 477 499 IPR001611 GO:0005515(InterPro)
Cec05g1101 1056 Pfam Leucine Rich Repeat 501 522 IPR001611 GO:0005515(InterPro)
Cec05g1101 1056 Pfam Leucine Rich Repeat 355 377 IPR001611 GO:0005515(InterPro)
Cec05g1101 1056 PANTHER OS04G0122200 PROTEIN 59 207 IPR051809 -
Cec05g1101 1056 Gene3D Ribonuclease Inhibitor 161 414 IPR032675 -
Cec05g1101 1056 SUPERFAMILY L domain-like 42 324 - -
Cec05g1101 1056 Gene3D Transferase(Phosphotransferase) domain 1 856 1055 - -
Cec05g1101 1056 SMART LRR_typ_2 609 633 IPR003591 -
Cec05g1101 1056 SMART LRR_typ_2 137 160 IPR003591 -
Cec05g1101 1056 SMART LRR_typ_2 499 523 IPR003591 -
Cec05g1101 1056 SMART LRR_typ_2 353 377 IPR003591 -
Cec05g1101 1056 SMART LRR_typ_2 401 424 IPR003591 -
Cec05g1101 1056 SMART LRR_typ_2 113 136 IPR003591 -
Cec05g1101 1056 ProSiteProfiles Leucine-rich repeat profile. 611 634 IPR001611 GO:0005515(InterPro)
Cec05g1101 1056 FunFam Phytosulfokine receptor 1 743 855 - -
Cec05g1101 1056 CDD STKc_IRAK 786 1047 - -
Cec05g1101 1056 SUPERFAMILY Protein kinase-like (PK-like) 762 1051 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1101 Cec-Chr5:9724841 Cec09g2350 Cec-Chr9:40323737 2.90E-70 dispersed
Cec01g0712 Cec-Chr1:7917253 Cec05g1101 Cec-Chr5:9724841 1.10E-28 transposed
Cec06g1423 Cec-Chr6:27777196 Cec05g1101 Cec-Chr5:9724841 3.10E-51 transposed
Cec09g0355 Cec-Chr9:2971279 Cec05g1101 Cec-Chr5:9724841 1.30E-129 transposed
Cec11g0097 Cec-Chr11:1197317 Cec05g1101 Cec-Chr5:9724841 7.20E-144 transposed
Cec05g1101 Cec-Chr5:9724841 Cec06g1792 Cec-Chr6:31378335 9.60E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72004 PF00069 Pkinase 5.50E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1101 K27626 - rcu:8265318 1374.76