Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g1101 | ATGAGATCTCTACTGGTCTCAGAGGTGATGGTGGTTAATCTTGTCAAACCGTCTTTCCTCAAATGGATATTATTGAGTTGCCTGCTTTCTTTCTCGCTGGCTCTGAAACAGACTAATAAAGTCTGTGATTCAAAAGATTTACTGGCATTGAGGGGCTTTGTGAATAGCCTTGCAAATAGTTCTGTTCTCTCTGTATGGTTAAATGAATCCAACTGCTGCAATTGGGATGGTGTGGATTGTGGATATGATGGCAACAGCTCGCGCACTAACAGAGTTACCAGGTTAGAACTGCCTAATATGAATCTGAAAGGCAAGATTTCACAATCACTTGGTGGTTTAGATCAGTTAATTTGGCTGAATCTATCATACAATCAGCTTGAAGGTGTATTGCCAACAGAACTCTCAAGCTTGAAGCAACTCCAGGTTTTGGATTTGAGTTACAATAAACTGTCAGGACCAGTCACCAATGCAACTTCAGGATTGAAATCTGTTCACGTTCTGAATATTTCAAGCAATTCATTCATTGGGGATTTTCCCCAGCTTGTGGGTTTTCAAAATCTTGTTGCCTTCAACATAAGTAACAATTCTTTCACGGGCCGGTTAGCTTCACAGATTTGCAATTCCTCCATCATGATTCAGGTTGTTGATATTTCACTGAACCGAATATCTGGAAATCTTCAAGGTTTGGACAATTGCAGCAAATCTCTCAAACATTTTCGTGCAGACAGTAACTTCCTTACTGGCCATCTGCCAGATTCGTTGTATTCATTATCATCCATGGAGTATTTCTCAATCCCTGGGAACAGCTTCTTTGGCCAATTAAGCATGGAACTGAGTAAGCTTTCTAGGCTTAAATCCTTTATAGTATTTGGAAACAAATTTTCTGGTGAACTTCCAAATGTGTTTGGTAATTTTTCAGAACTACAGGAGTTTGTTGCACACTCCAACTTGTTCTCTGGATTATTGCCTTCATCTCTGTCATTGTGCTCAAAGGTCAGAGTGTTTGATCTTAGAAATAATTCTTTAACTGGTACTATAGATCTCAATTTTTCTAGGCTACCAAATCTTCAAATGCTTGATCTAGCCTCGAATCACTTTTCTGGGCCCCTACCAAATTCTCTATCCGATTGCCATGAACTGAAAACTCTTAGCCTTGCCAAAAACAAGTTAACTGGTCAAATTCCTCGAAATTATGCAAAGCTTTCCTCTCTGTCCTTTCTATCTTTGTCAAACAACAGTATCATAGACTTGAGTGGTGCACTATCTATTTTACAAAATTGCAGAAATCTGACTGTTCTTATTCTTACAAAGAACTTTCGTAATGAGGTACTTCCACAGAGTGAAACTGTTTTCAACAACTTGATGCTTTTGGCATTTGGTAACTGTGGTCTGAGAGGACAAATTCCAGGTTGGTTAATAGGTTGCAAGAAATTAAGCATCCTCGACTTGTCTTGGAATCACTTAAATGGAAGTATCCCTGCTTGGATTGGTCAGCTGGAAAATTTGTTTTATTTGGACTTATCCAACAATTCTCTGACAGGAGAAATCCCAAAAAGCTTGACACAGATGAAAGCACTAATTTCCAGACACGGCAGCTTGTCGGGTTCGACATCATCTGCTGGAATCCCCCTTTTTGTCAAACGAAATCAAAGTGCTACTGGTTTGCAATACAACCAAGCGTCAAGCTTTCCACCATCGATTTACTTGAGCTACAACAGAATTAATGGAACTATTTTTCCGGAAATTGGCAGATTAAAATGGCTGCATGTCTTGGATTTGAGTAGGAATAATATTACTGGGCCCATACCGAGCACCATATCAGATATGGAGAACTTGGAAACATTAGATTTGTCGAATAATGAACTTTATGGACAAATTCCACCATCACTCAACAAGCTCACCTTCTTGTCAAAGTTTAGCGTGGCAAATAATCACTTGGAGGGACCAATTCCTAATGGAGGCCAATTCCTAAGCTTTCCCAGCTCCTGCTTTGATGGTAACACAGGACTTTGTGGGGAAATTGACAACCCTTGTCATTCTGTTGATGGGTTAGAAACAAAACCCGAAACCAACAATTACTCAAAGAGAAAAGTTAATAGAAGCATCATTCTTTGCCTTACAGTCGGTGCAGCTGCAGCAATCCTCCTGCTCCTTACAGTGGTTTTACTCAAAATGTCCAGGAAAGATGTTGGAGATCGACGAAATAACAGGTTTGATGAGGAATTTGACAGGCCTGACAGGTTATCTGGAGCTCTTGGATCGTCAAAGTTGGTGCTCTTTCAGAATTCAGAATGCAATGATCTTACAGTTGCAGAGTTGTTAAAAGCTACTTGCAATTTCAACCAAGCGAACATAATAGGCTGTGGTGGATTTGGCCTGGTTTACAAAGCCAGCCTTCCCAATGGTTCAAAAGCTGCAGTCAAGAGGCTTACAGGAGATTGTGGTCAGATGGAACGGGAATTCCAAGCTGAAGTAGAAGCTCTTTCTCGAGCACAGCATAAGAATCTTGTTTCTCTTCAAGGTTACTGCAAACATGGAAATGACAGGCTATTAATTTACTCCTACATGGAAAATGGAAGTTTGGACTACTGGCTTCACGAGGTTGTTGATGATGATTCAATACTAAAATGGGAAGCAAGACTCAAAATCGCACAGGGTGCAGCTCATGGATTGGCTTACTTGCATAAGGAATGTCAGCCCAACATAATCCACCGAGATGTAAAATCAAGCAACATACTTCTAGATGACAGATTTGAGGCTCATTTAGCTGATTTTGGTCTTTCAAGATTACTCCGGCCATATGACACTCATGTTACCACGGACTTGGTTGGGACTTTGGGTTATATTCCTCCTGAATACAGCCAGACATTAACTGCAACTTGCAGGGGTGATGTTTATAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACTGGTCGGAGGCCTGTAGAGGTATGCAAAGGTAAAGCCTGCAGGGATCTGGTGTCTTGGGTGATTCAAAAAAAATCAGAGAAGAGAGAAGAGGAGATTATTGATCCTGCAATTTGGGACACTAATAGCAAAAAACAGATTTTAGAGGTTCTTGGTATTACTTGTAAATGCATAGACCAAGATCCAAGGAAGAGACCTTCGATTGAAGAAGTTTCTTCATGGCTAGATGGTGTTACGTTGTAG | 3171 | 40.4 | MRSLLVSEVMVVNLVKPSFLKWILLSCLLSFSLALKQTNKVCDSKDLLALRGFVNSLANSSVLSVWLNESNCCNWDGVDCGYDGNSSRTNRVTRLELPNMNLKGKISQSLGGLDQLIWLNLSYNQLEGVLPTELSSLKQLQVLDLSYNKLSGPVTNATSGLKSVHVLNISSNSFIGDFPQLVGFQNLVAFNISNNSFTGRLASQICNSSIMIQVVDISLNRISGNLQGLDNCSKSLKHFRADSNFLTGHLPDSLYSLSSMEYFSIPGNSFFGQLSMELSKLSRLKSFIVFGNKFSGELPNVFGNFSELQEFVAHSNLFSGLLPSSLSLCSKVRVFDLRNNSLTGTIDLNFSRLPNLQMLDLASNHFSGPLPNSLSDCHELKTLSLAKNKLTGQIPRNYAKLSSLSFLSLSNNSIIDLSGALSILQNCRNLTVLILTKNFRNEVLPQSETVFNNLMLLAFGNCGLRGQIPGWLIGCKKLSILDLSWNHLNGSIPAWIGQLENLFYLDLSNNSLTGEIPKSLTQMKALISRHGSLSGSTSSAGIPLFVKRNQSATGLQYNQASSFPPSIYLSYNRINGTIFPEIGRLKWLHVLDLSRNNITGPIPSTISDMENLETLDLSNNELYGQIPPSLNKLTFLSKFSVANNHLEGPIPNGGQFLSFPSSCFDGNTGLCGEIDNPCHSVDGLETKPETNNYSKRKVNRSIILCLTVGAAAAILLLLTVVLLKMSRKDVGDRRNNRFDEEFDRPDRLSGALGSSKLVLFQNSECNDLTVAELLKATCNFNQANIIGCGGFGLVYKASLPNGSKAAVKRLTGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCKHGNDRLLIYSYMENGSLDYWLHEVVDDDSILKWEARLKIAQGAAHGLAYLHKECQPNIIHRDVKSSNILLDDRFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKACRDLVSWVIQKKSEKREEEIIDPAIWDTNSKKQILEVLGITCKCIDQDPRKRPSIEEVSSWLDGVTL | 1056 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 9724841 | 9728011 | - | CePI673135_05g011010.1 | Cec05g1101 | 202904 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g1101 | 1056 | FunFam | Tyrosine-sulfated glycopeptide receptor 1 | 350 | 683 | - | - | |
Cec05g1101 | 1056 | PRINTS | Leucine-rich repeat signature | 502 | 515 | - | - | |
Cec05g1101 | 1056 | PRINTS | Leucine-rich repeat signature | 609 | 622 | - | - | |
Cec05g1101 | 1056 | SMART | serkin_6 | 780 | 1051 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1101 | 1056 | Gene3D | Ribonuclease Inhibitor | 447 | 536 | IPR032675 | - | |
Cec05g1101 | 1056 | Gene3D | Ribonuclease Inhibitor | 43 | 160 | IPR032675 | - | |
Cec05g1101 | 1056 | ProSiteProfiles | Protein kinase domain profile. | 780 | 1051 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1101 | 1056 | FunFam | Leucine-rich repeat receptor-like protein kinase | 856 | 1056 | - | - | |
Cec05g1101 | 1056 | SUPERFAMILY | L domain-like | 317 | 672 | - | - | |
Cec05g1101 | 1056 | Pfam | Protein kinase domain | 781 | 1047 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1101 | 1056 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 902 | 914 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g1101 | 1056 | ProSitePatterns | Protein kinases ATP-binding region signature. | 786 | 808 | IPR017441 | GO:0005524(InterPro) | |
Cec05g1101 | 1056 | Pfam | Leucine rich repeat N-terminal domain | 44 | 80 | IPR013210 | - | |
Cec05g1101 | 1056 | ProSiteProfiles | Leucine-rich repeat profile. | 403 | 425 | IPR001611 | GO:0005515(InterPro) | |
Cec05g1101 | 1056 | Pfam | Leucine rich repeat | 567 | 622 | IPR001611 | GO:0005515(InterPro) | |
Cec05g1101 | 1056 | Pfam | Leucine rich repeat | 91 | 150 | IPR001611 | GO:0005515(InterPro) | |
Cec05g1101 | 1056 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 251 | 346 | - | - | |
Cec05g1101 | 1056 | FunFam | Nuclear pore complex protein NUP107 | 43 | 184 | - | - | |
Cec05g1101 | 1056 | Gene3D | Phosphorylase Kinase; domain 1 | 750 | 855 | - | - | |
Cec05g1101 | 1056 | Gene3D | Ribonuclease Inhibitor | 567 | 678 | IPR032675 | - | |
Cec05g1101 | 1056 | Pfam | Leucine Rich Repeat | 477 | 499 | IPR001611 | GO:0005515(InterPro) | |
Cec05g1101 | 1056 | Pfam | Leucine Rich Repeat | 501 | 522 | IPR001611 | GO:0005515(InterPro) | |
Cec05g1101 | 1056 | Pfam | Leucine Rich Repeat | 355 | 377 | IPR001611 | GO:0005515(InterPro) | |
Cec05g1101 | 1056 | PANTHER | OS04G0122200 PROTEIN | 59 | 207 | IPR051809 | - | |
Cec05g1101 | 1056 | Gene3D | Ribonuclease Inhibitor | 161 | 414 | IPR032675 | - | |
Cec05g1101 | 1056 | SUPERFAMILY | L domain-like | 42 | 324 | - | - | |
Cec05g1101 | 1056 | Gene3D | Transferase(Phosphotransferase) domain 1 | 856 | 1055 | - | - | |
Cec05g1101 | 1056 | SMART | LRR_typ_2 | 609 | 633 | IPR003591 | - | |
Cec05g1101 | 1056 | SMART | LRR_typ_2 | 137 | 160 | IPR003591 | - | |
Cec05g1101 | 1056 | SMART | LRR_typ_2 | 499 | 523 | IPR003591 | - | |
Cec05g1101 | 1056 | SMART | LRR_typ_2 | 353 | 377 | IPR003591 | - | |
Cec05g1101 | 1056 | SMART | LRR_typ_2 | 401 | 424 | IPR003591 | - | |
Cec05g1101 | 1056 | SMART | LRR_typ_2 | 113 | 136 | IPR003591 | - | |
Cec05g1101 | 1056 | ProSiteProfiles | Leucine-rich repeat profile. | 611 | 634 | IPR001611 | GO:0005515(InterPro) | |
Cec05g1101 | 1056 | FunFam | Phytosulfokine receptor 1 | 743 | 855 | - | - | |
Cec05g1101 | 1056 | CDD | STKc_IRAK | 786 | 1047 | - | - | |
Cec05g1101 | 1056 | SUPERFAMILY | Protein kinase-like (PK-like) | 762 | 1051 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g1101 | Cec-Chr5:9724841 | Cec09g2350 | Cec-Chr9:40323737 | 2.90E-70 | dispersed | |
Cec01g0712 | Cec-Chr1:7917253 | Cec05g1101 | Cec-Chr5:9724841 | 1.10E-28 | transposed | |
Cec06g1423 | Cec-Chr6:27777196 | Cec05g1101 | Cec-Chr5:9724841 | 3.10E-51 | transposed | |
Cec09g0355 | Cec-Chr9:2971279 | Cec05g1101 | Cec-Chr5:9724841 | 1.30E-129 | transposed | |
Cec11g0097 | Cec-Chr11:1197317 | Cec05g1101 | Cec-Chr5:9724841 | 7.20E-144 | transposed | |
Cec05g1101 | Cec-Chr5:9724841 | Cec06g1792 | Cec-Chr6:31378335 | 9.60E-58 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72004 | PF00069 | Pkinase | 5.50E-44 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g1101 | K27626 | - | rcu:8265318 | 1374.76 |