Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g1107 | ATGGGTTGCGTTTGCTGTAAGCCCTCTGCTATTGAAGATAGCAAGGAAAGTCCAAGGGAGAGGGTGTCAAGTAAGACCTCGTCTGACCTGCGGGTGGCAAGAGTGACTTCATCATCGAGGGAAGAAGCTTTTCGTACTAAAGATCAGTATGATGGTAATGATGCGAGAGTGACGTTGATTGACAAGCAGGTGAATGGGTCCGGTCGACTGCCAGGTGAGAATTTTGAGAGGAAGAGGGAGAAGATGGAGCATATGGGTGCTCAACATCCTTCAATGGGGAGAATTCCGAAGGCAGCAGAGGGAGACCACATTGCTGCAGGGTGGCCGCCGTGGCTGGCTGCAGTTGCTGGCGAGGCAATCAGAGGATGGCTACCCCGACGAGCTGATTCTTTTGAGAAATTGGATAAAATTGGCCAAGGGACTTATAGTAATGTATACAGGGCTCGTGATCTTGACCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGGTTTGACAACCTGGAACCTGAGAGCGTCCGCTTTATGGCTAGGGAAATTCACATATTGCGTAGACTTGATCATCCAAATGTAATAAAGCTGGAGGGTCTAGTTACATCTAGGATGTCTTGCAGCCTCTATCTTGTTTTCGAGTACATGGAACATGACTTGGCAGGACTTGCTTCACATCCTGGTGTGAAGTTTACAGAGGCGCAGGTCAAATGTTACATGCAGCAACTTTTACTTGGACTTGATCATTGTCACAGTCATGGAGTTCTACATCGTGATATAAAGGGTTCCAACCTTTTAATTGACAATCATGGCGTCTTGAAAATTGCTGACTTTGGTCTTGCAAGTTTTTTTGATATCCATCAAAATCAGCCACTGACTAGTCGGGTTGTTACTCTTTGGTATCGACCACCTGAGCTTTTACTTGGTGCCACTTATTACGGTACAGCTGTAGATTTGTGGAGTACTGGCTGCATACTTGCTGAGTTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACAGAGGTGGAACAGCTACATAAAATATTTAAACTGTGTGGCTCTCCTTCAGAGGATTATTGGAGAAAATCAAGGTTGCCACATGCAACAATATTTAAGCCCCAACAGCCCTATAGACGTTGTGTTGCAGACACATTTAAAGATTTCCCTGCACCAGCTTTAGCTCTCATTGAGACATTACTCTCTATAGATCCTGCAGATCGTGGCTCTGCTGCTCTTGCCCTTAAAAGCGAATTTTTTTCAACAAAGCCACTACCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCAAGCAAAGAATTTGATGCCAAGATAAGGGATGAGGAAGCTAGAAGACAAGGAGCAGTAGGAAGCAAAGGACACCGGCTTGACCTGCAAAGGGAAGATAGAGAGTCTCGAGCTGTCCCTGCGCCTGATGCCAATGCTGAATTAGCCTCATCAATGCAGAAAAGACAAGGCCTGTCCAACTCAAAGAGCCGGAGTGAGAAGTTTAACCCACATCCAGAAGAAGCTTCTGGCTTTCCTATTGATCCACCTAGACCTTCACAAGGAGCAGAAAGAATGGATTCTCAGGTGCGTCATCCGAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGGGCTGCTTGGGCAAAGGCTAGTAAGAACCCAGATGATCCTCCCAAAATCTCAACCGGGGCTGAAACTTTCGCAACTTCAGGACTAGTAGCAGCCAGAAGAAGTATGCTGGCTGAAGATTGTAGGGAAAAGTCTGATTCTTCACAAGGAGAGGTTCAAAAGCTAATTGGCAGGTTTCCCGGTTCCTTCAAAGAAACCTCAGAGTCGTCAATGCTACCAGACCAAAAGTTCTCAAATCACAGTATTGTAGGCTCACATGACAAAGAGAGGAGCAGCGCCAAAGACCCTATAGTTGTGGGTTATGGCTCAAAGGGTCATAAGATTCATTACTCTGGTCCATTATTGGTTCCTTCTGGCAACATGGACCAAATGTTGAAGGACCATGATCGCCATATCCAAGAAGCAGTAAGACGAGCTCGGCTTGACAAGGTTAAGGTACGGAAGGTTCAAGCTGATGGGAAACAGATGTCGACAAATTCATTATTCGTCTCTGGTCGTTAA | 2124 | 45.9 | MGCVCCKPSAIEDSKESPRERVSSKTSSDLRVARVTSSSREEAFRTKDQYDGNDARVTLIDKQVNGSGRLPGENFERKREKMEHMGAQHPSMGRIPKAAEGDHIAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLLGLDHCHSHGVLHRDIKGSNLLIDNHGVLKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIETLLSIDPADRGSAALALKSEFFSTKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGAVGSKGHRLDLQREDRESRAVPAPDANAELASSMQKRQGLSNSKSRSEKFNPHPEEASGFPIDPPRPSQGAERMDSQVRHPKKASHSGPLAQRAAWAKASKNPDDPPKISTGAETFATSGLVAARRSMLAEDCREKSDSSQGEVQKLIGRFPGSFKETSESSMLPDQKFSNHSIVGSHDKERSSAKDPIVVGYGSKGHKIHYSGPLLVPSGNMDQMLKDHDRHIQEAVRRARLDKVKVRKVQADGKQMSTNSLFVSGR | 707 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 9800993 | 9806509 | - | CePI673135_05g011070.1 | Cec05g1107 | 202910 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g1107 | 707 | MobiDBLite | consensus disorder prediction | 35 | 49 | - | - | |
Cec05g1107 | 707 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Cec05g1107 | 707 | ProSitePatterns | Protein kinases ATP-binding region signature. | 137 | 160 | IPR017441 | GO:0005524(InterPro) | |
Cec05g1107 | 707 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 251 | 263 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g1107 | 707 | Gene3D | Transferase(Phosphotransferase) domain 1 | 214 | 454 | - | - | |
Cec05g1107 | 707 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 213 | - | - | |
Cec05g1107 | 707 | CDD | STKc_CDK9_like | 131 | 415 | - | - | |
Cec05g1107 | 707 | ProSiteProfiles | Protein kinase domain profile. | 131 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1107 | 707 | Pfam | Protein kinase domain | 131 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1107 | 707 | PANTHER | CELL DIVISION PROTEIN KINASE | 130 | 415 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Cec05g1107 | 707 | SMART | serkin_6 | 131 | 415 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1107 | 707 | MobiDBLite | consensus disorder prediction | 444 | 563 | - | - | |
Cec05g1107 | 707 | SUPERFAMILY | Protein kinase-like (PK-like) | 125 | 423 | IPR011009 | - | |
Cec05g1107 | 707 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
Cec05g1107 | 707 | FunFam | probable serine/threonine-protein kinase At1g54610 | 118 | 213 | - | - | |
Cec05g1107 | 707 | FunFam | probable serine/threonine-protein kinase At1g54610 | 214 | 455 | - | - | |
Cec05g1107 | 707 | MobiDBLite | consensus disorder prediction | 444 | 471 | - | - | |
Cec05g1107 | 707 | MobiDBLite | consensus disorder prediction | 480 | 496 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g1747 | Cec-Chr1:32065056 | Cec05g1107 | Cec-Chr5:9800993 | 6.80E-161 | dispersed | |
Cec02g1847 | Cec-Chr2:36261307 | Cec05g1107 | Cec-Chr5:9800993 | 9.60E-175 | dispersed | |
Cec05g0684 | Cec-Chr5:5607655 | Cec05g1107 | Cec-Chr5:9800993 | 3.90E-183 | dispersed | |
Cec05g1107 | Cec-Chr5:9800993 | Cec11g0067 | Cec-Chr11:826153 | 6.80E-193 | dispersed | |
Cec05g1107 | Cec-Chr5:9800993 | Cec02g1848 | Cec-Chr2:36269350 | 2.40E-206 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72005 | PF00069 | Pkinase | 1.20E-68 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g1107 | - | - | - | 0.0 |