Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1107 ATGGGTTGCGTTTGCTGTAAGCCCTCTGCTATTGAAGATAGCAAGGAAAGTCCAAGGGAGAGGGTGTCAAGTAAGACCTCGTCTGACCTGCGGGTGGCAAGAGTGACTTCATCATCGAGGGAAGAAGCTTTTCGTACTAAAGATCAGTATGATGGTAATGATGCGAGAGTGACGTTGATTGACAAGCAGGTGAATGGGTCCGGTCGACTGCCAGGTGAGAATTTTGAGAGGAAGAGGGAGAAGATGGAGCATATGGGTGCTCAACATCCTTCAATGGGGAGAATTCCGAAGGCAGCAGAGGGAGACCACATTGCTGCAGGGTGGCCGCCGTGGCTGGCTGCAGTTGCTGGCGAGGCAATCAGAGGATGGCTACCCCGACGAGCTGATTCTTTTGAGAAATTGGATAAAATTGGCCAAGGGACTTATAGTAATGTATACAGGGCTCGTGATCTTGACCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGGTTTGACAACCTGGAACCTGAGAGCGTCCGCTTTATGGCTAGGGAAATTCACATATTGCGTAGACTTGATCATCCAAATGTAATAAAGCTGGAGGGTCTAGTTACATCTAGGATGTCTTGCAGCCTCTATCTTGTTTTCGAGTACATGGAACATGACTTGGCAGGACTTGCTTCACATCCTGGTGTGAAGTTTACAGAGGCGCAGGTCAAATGTTACATGCAGCAACTTTTACTTGGACTTGATCATTGTCACAGTCATGGAGTTCTACATCGTGATATAAAGGGTTCCAACCTTTTAATTGACAATCATGGCGTCTTGAAAATTGCTGACTTTGGTCTTGCAAGTTTTTTTGATATCCATCAAAATCAGCCACTGACTAGTCGGGTTGTTACTCTTTGGTATCGACCACCTGAGCTTTTACTTGGTGCCACTTATTACGGTACAGCTGTAGATTTGTGGAGTACTGGCTGCATACTTGCTGAGTTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACAGAGGTGGAACAGCTACATAAAATATTTAAACTGTGTGGCTCTCCTTCAGAGGATTATTGGAGAAAATCAAGGTTGCCACATGCAACAATATTTAAGCCCCAACAGCCCTATAGACGTTGTGTTGCAGACACATTTAAAGATTTCCCTGCACCAGCTTTAGCTCTCATTGAGACATTACTCTCTATAGATCCTGCAGATCGTGGCTCTGCTGCTCTTGCCCTTAAAAGCGAATTTTTTTCAACAAAGCCACTACCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCAAGCAAAGAATTTGATGCCAAGATAAGGGATGAGGAAGCTAGAAGACAAGGAGCAGTAGGAAGCAAAGGACACCGGCTTGACCTGCAAAGGGAAGATAGAGAGTCTCGAGCTGTCCCTGCGCCTGATGCCAATGCTGAATTAGCCTCATCAATGCAGAAAAGACAAGGCCTGTCCAACTCAAAGAGCCGGAGTGAGAAGTTTAACCCACATCCAGAAGAAGCTTCTGGCTTTCCTATTGATCCACCTAGACCTTCACAAGGAGCAGAAAGAATGGATTCTCAGGTGCGTCATCCGAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGGGCTGCTTGGGCAAAGGCTAGTAAGAACCCAGATGATCCTCCCAAAATCTCAACCGGGGCTGAAACTTTCGCAACTTCAGGACTAGTAGCAGCCAGAAGAAGTATGCTGGCTGAAGATTGTAGGGAAAAGTCTGATTCTTCACAAGGAGAGGTTCAAAAGCTAATTGGCAGGTTTCCCGGTTCCTTCAAAGAAACCTCAGAGTCGTCAATGCTACCAGACCAAAAGTTCTCAAATCACAGTATTGTAGGCTCACATGACAAAGAGAGGAGCAGCGCCAAAGACCCTATAGTTGTGGGTTATGGCTCAAAGGGTCATAAGATTCATTACTCTGGTCCATTATTGGTTCCTTCTGGCAACATGGACCAAATGTTGAAGGACCATGATCGCCATATCCAAGAAGCAGTAAGACGAGCTCGGCTTGACAAGGTTAAGGTACGGAAGGTTCAAGCTGATGGGAAACAGATGTCGACAAATTCATTATTCGTCTCTGGTCGTTAA 2124 45.9 MGCVCCKPSAIEDSKESPRERVSSKTSSDLRVARVTSSSREEAFRTKDQYDGNDARVTLIDKQVNGSGRLPGENFERKREKMEHMGAQHPSMGRIPKAAEGDHIAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLLGLDHCHSHGVLHRDIKGSNLLIDNHGVLKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIETLLSIDPADRGSAALALKSEFFSTKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGAVGSKGHRLDLQREDRESRAVPAPDANAELASSMQKRQGLSNSKSRSEKFNPHPEEASGFPIDPPRPSQGAERMDSQVRHPKKASHSGPLAQRAAWAKASKNPDDPPKISTGAETFATSGLVAARRSMLAEDCREKSDSSQGEVQKLIGRFPGSFKETSESSMLPDQKFSNHSIVGSHDKERSSAKDPIVVGYGSKGHKIHYSGPLLVPSGNMDQMLKDHDRHIQEAVRRARLDKVKVRKVQADGKQMSTNSLFVSGR 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9800993 9806509 - CePI673135_05g011070.1 Cec05g1107 202910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1107 707 MobiDBLite consensus disorder prediction 35 49 - -
Cec05g1107 707 MobiDBLite consensus disorder prediction 1 49 - -
Cec05g1107 707 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524(InterPro)
Cec05g1107 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1107 707 Gene3D Transferase(Phosphotransferase) domain 1 214 454 - -
Cec05g1107 707 Gene3D Phosphorylase Kinase; domain 1 118 213 - -
Cec05g1107 707 CDD STKc_CDK9_like 131 415 - -
Cec05g1107 707 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1107 707 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1107 707 PANTHER CELL DIVISION PROTEIN KINASE 130 415 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cec05g1107 707 SMART serkin_6 131 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1107 707 MobiDBLite consensus disorder prediction 444 563 - -
Cec05g1107 707 SUPERFAMILY Protein kinase-like (PK-like) 125 423 IPR011009 -
Cec05g1107 707 MobiDBLite consensus disorder prediction 12 27 - -
Cec05g1107 707 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Cec05g1107 707 FunFam probable serine/threonine-protein kinase At1g54610 214 455 - -
Cec05g1107 707 MobiDBLite consensus disorder prediction 444 471 - -
Cec05g1107 707 MobiDBLite consensus disorder prediction 480 496 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1747 Cec-Chr1:32065056 Cec05g1107 Cec-Chr5:9800993 6.80E-161 dispersed
Cec02g1847 Cec-Chr2:36261307 Cec05g1107 Cec-Chr5:9800993 9.60E-175 dispersed
Cec05g0684 Cec-Chr5:5607655 Cec05g1107 Cec-Chr5:9800993 3.90E-183 dispersed
Cec05g1107 Cec-Chr5:9800993 Cec11g0067 Cec-Chr11:826153 6.80E-193 dispersed
Cec05g1107 Cec-Chr5:9800993 Cec02g1848 Cec-Chr2:36269350 2.40E-206 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72005 PF00069 Pkinase 1.20E-68 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1107 - - - 0.0