Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1124 ATGATGCTTGCTCAAATCGACATTGTTGTGACATCCCAAATTTTTAGATCGAAGCTTTGGAGTCGCAGTCCAGCTGCATTAAGTCTCCTGTTAAGATGTGATGATTTAATGAAGTGGAAAAAGGAACTGACAGAGAGAAGGAATTTGTCTATTGGTGTTGGTGGAACCGGTGGAGGTCATCGCGTGAAGAAGAAGGCCGGAGGAGCTAGGCTGTGGATGCGTCTCGACAGGTGGGGACAATCGGAGCTTTTAGAGTGGGACAAGAATGCTCTAATCCGACGTGCTGCAATTCCGGCTAGGGATTTGAGGATTCTTGGTCCTGTTTTCTCACACTCATCTAGCATACTCGCCAGGGAAAAGGCCATGGTCGTTAATTTAGAGTTCATAAAAGCTATAGTTACTGCTGAAGAAGTCCTATTACTTGACCCTCTTCGCCAAGAGGTTATTCCATTTGTAGATCAGCTAAGGAAGCTACTTGCTAAGACGGGTTCATCTCAACTTGAAAATGATGGGAATGTTTCGAGAGGAGGAAAGTGGTTGCCAGTTTCAGAAGCTGCTGAAGGTGAGCAGTATGAGCTCCCGTTTGAGTTTCAGGTTCTGGAAAATGCTTTGGAGGTTGTGTGCATGTACTTGGATTCCAGTGTGGCAGACCTTGAGCGGGATGCTTATCCAGTTCTGGATGAACTGGCTAGGAATGTCAGCACCAAGAATCTAGAACGTGTGAGGAGTTTGAAAAGTAATCTTACCCGTATTCTTGCACGCGTTCAGAAGGTGCGGGACGAGATAGAACATCTATTAGATGATAATGAAGATATGGCACAACTATATTTGACAAGGAAATGGATGCAGAATCAACAATTTGATGCTTTGCCGGGAGGTGTGGCTTCCAACTGCACAACTGCTATCGTTCCCCATCTTCGTCGACTTAGTTCCACCAGGAGTGGCAGTGTGGTGACCAGCAACCTTTTGGATGATAATGACATAGAGGACCTGGAGATGTTGCTCGAGGCATACTTTATGCAGTTGGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATCGACGACACCGAGGATTATGTCAATATTCAACTTGACAACCAAAGAAATGAACTCATTCAGTTTCAGTTAACCCTGACAATTGCTTCATTTGCCATAGCGGTTGAAACCTTAATCGCCGGGTTGTTTGGTATGAACATCCCTTGTACATTGTACGAGACGGATGGGGTGTTTGGGTACTTTGTCGGAGGTACTTCAGCAGGATGTTTATTGCTTTTCCTGCTTATTTTTGGGTACGCAAAATGGAAGAAGCTTCTTGGTTCATGA 1332 44.89 MMLAQIDIVVTSQIFRSKLWSRSPAALSLLLRCDDLMKWKKELTERRNLSIGVGGTGGGHRVKKKAGGARLWMRLDRWGQSELLEWDKNALIRRAAIPARDLRILGPVFSHSSSILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVIPFVDQLRKLLAKTGSSQLENDGNVSRGGKWLPVSEAAEGEQYELPFEFQVLENALEVVCMYLDSSVADLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQNQQFDALPGGVASNCTTAIVPHLRRLSSTRSGSVVTSNLLDDNDIEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAIAVETLIAGLFGMNIPCTLYETDGVFGYFVGGTSAGCLLLFLLIFGYAKWKKLLGS 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10038779 10050258 - CePI673135_05g011240.1 Cec05g1124 202927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1124 443 CDD Mrs2_Mfm1p-like 72 440 IPR039204 -
Cec05g1124 443 Gene3D - 60 143 - -
Cec05g1124 443 FunFam Magnesium transporter MRS2-1 60 143 - -
Cec05g1124 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 379 430 IPR045863 -
Cec05g1124 443 Coils Coil 241 275 - -
Cec05g1124 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 59 440 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cec05g1124 443 Pfam CorA-like Mg2+ transporter protein 329 434 IPR002523 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cec05g1124 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
Cec05g1124 443 Pfam Magnesium transporter MRS2-like 85 287 - -
Cec05g1124 443 Gene3D Magnesium transport protein CorA, transmembrane region 145 374 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0026 Cec-Chr2:264750 Cec05g1124 Cec-Chr5:10038779 1.80E-196 dispersed
Cec05g1124 Cec-Chr5:10038779 Cec07g0092 Cec-Chr7:953470 1.20E-83 dispersed
Cec05g1124 Cec-Chr5:10038779 Cec06g0671 Cec-Chr6:7578908 2.70E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1124 K16075 - csv:101203496 711.449