Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g1124 | ATGATGCTTGCTCAAATCGACATTGTTGTGACATCCCAAATTTTTAGATCGAAGCTTTGGAGTCGCAGTCCAGCTGCATTAAGTCTCCTGTTAAGATGTGATGATTTAATGAAGTGGAAAAAGGAACTGACAGAGAGAAGGAATTTGTCTATTGGTGTTGGTGGAACCGGTGGAGGTCATCGCGTGAAGAAGAAGGCCGGAGGAGCTAGGCTGTGGATGCGTCTCGACAGGTGGGGACAATCGGAGCTTTTAGAGTGGGACAAGAATGCTCTAATCCGACGTGCTGCAATTCCGGCTAGGGATTTGAGGATTCTTGGTCCTGTTTTCTCACACTCATCTAGCATACTCGCCAGGGAAAAGGCCATGGTCGTTAATTTAGAGTTCATAAAAGCTATAGTTACTGCTGAAGAAGTCCTATTACTTGACCCTCTTCGCCAAGAGGTTATTCCATTTGTAGATCAGCTAAGGAAGCTACTTGCTAAGACGGGTTCATCTCAACTTGAAAATGATGGGAATGTTTCGAGAGGAGGAAAGTGGTTGCCAGTTTCAGAAGCTGCTGAAGGTGAGCAGTATGAGCTCCCGTTTGAGTTTCAGGTTCTGGAAAATGCTTTGGAGGTTGTGTGCATGTACTTGGATTCCAGTGTGGCAGACCTTGAGCGGGATGCTTATCCAGTTCTGGATGAACTGGCTAGGAATGTCAGCACCAAGAATCTAGAACGTGTGAGGAGTTTGAAAAGTAATCTTACCCGTATTCTTGCACGCGTTCAGAAGGTGCGGGACGAGATAGAACATCTATTAGATGATAATGAAGATATGGCACAACTATATTTGACAAGGAAATGGATGCAGAATCAACAATTTGATGCTTTGCCGGGAGGTGTGGCTTCCAACTGCACAACTGCTATCGTTCCCCATCTTCGTCGACTTAGTTCCACCAGGAGTGGCAGTGTGGTGACCAGCAACCTTTTGGATGATAATGACATAGAGGACCTGGAGATGTTGCTCGAGGCATACTTTATGCAGTTGGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATCGACGACACCGAGGATTATGTCAATATTCAACTTGACAACCAAAGAAATGAACTCATTCAGTTTCAGTTAACCCTGACAATTGCTTCATTTGCCATAGCGGTTGAAACCTTAATCGCCGGGTTGTTTGGTATGAACATCCCTTGTACATTGTACGAGACGGATGGGGTGTTTGGGTACTTTGTCGGAGGTACTTCAGCAGGATGTTTATTGCTTTTCCTGCTTATTTTTGGGTACGCAAAATGGAAGAAGCTTCTTGGTTCATGA | 1332 | 44.89 | MMLAQIDIVVTSQIFRSKLWSRSPAALSLLLRCDDLMKWKKELTERRNLSIGVGGTGGGHRVKKKAGGARLWMRLDRWGQSELLEWDKNALIRRAAIPARDLRILGPVFSHSSSILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVIPFVDQLRKLLAKTGSSQLENDGNVSRGGKWLPVSEAAEGEQYELPFEFQVLENALEVVCMYLDSSVADLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQNQQFDALPGGVASNCTTAIVPHLRRLSSTRSGSVVTSNLLDDNDIEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAIAVETLIAGLFGMNIPCTLYETDGVFGYFVGGTSAGCLLLFLLIFGYAKWKKLLGS | 443 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 10038779 | 10050258 | - | CePI673135_05g011240.1 | Cec05g1124 | 202927 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g1124 | 443 | CDD | Mrs2_Mfm1p-like | 72 | 440 | IPR039204 | - | |
Cec05g1124 | 443 | Gene3D | - | 60 | 143 | - | - | |
Cec05g1124 | 443 | FunFam | Magnesium transporter MRS2-1 | 60 | 143 | - | - | |
Cec05g1124 | 443 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 379 | 430 | IPR045863 | - | |
Cec05g1124 | 443 | Coils | Coil | 241 | 275 | - | - | |
Cec05g1124 | 443 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 59 | 440 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
Cec05g1124 | 443 | Pfam | CorA-like Mg2+ transporter protein | 329 | 434 | IPR002523 | GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro) | |
Cec05g1124 | 443 | Gene3D | Magnesium transport protein CorA, transmembrane region | 381 | 441 | - | - | |
Cec05g1124 | 443 | Pfam | Magnesium transporter MRS2-like | 85 | 287 | - | - | |
Cec05g1124 | 443 | Gene3D | Magnesium transport protein CorA, transmembrane region | 145 | 374 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0026 | Cec-Chr2:264750 | Cec05g1124 | Cec-Chr5:10038779 | 1.80E-196 | dispersed | |
Cec05g1124 | Cec-Chr5:10038779 | Cec07g0092 | Cec-Chr7:953470 | 1.20E-83 | dispersed | |
Cec05g1124 | Cec-Chr5:10038779 | Cec06g0671 | Cec-Chr6:7578908 | 2.70E-86 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g1124 | K16075 | - | csv:101203496 | 711.449 |