Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1126 ATGAAGTCGATCAAATCCTCCGGCTTAAACATGGAGCAACCCATTCGTGGATCCTTTGATGAAGGCCAATACAGAAGCCGAAGCATTCACTCCGACGCCGCTAGAATCGATTTGGATAAGAAGGTGAAGAAGGTTCGAGGAAGACGCAAAACGAAGAACTCGTGGAAACAAGATAGCGAGAAGAGTTTTAAAGAAAAACGCACAATCGAGAGTCTATTTGAGAAGGATTTTGTGGAGAGGCTTCGGAACAGAATCCAAATCCAGACAAGATTTCATTTCGAAGATACTGAAAAGTACTTGCCCAGTGATGAATTGGGAACAATTATTCGAAGTGACCAAGCAAGGATGGCGGAGACAATATGGGAAGAAAGCGTAATTCGCCTGGCGCCGCTGTATAGAGCGGCGCTAATGGGCGAATGGGAGATAGCAGAAGCCATTTTCAAGCAAGATTCTAGAGCAATCACGTCGGAGATCAGCCTCTTGAACGAGACTGCTCTCCATGTAGCGGTCGGCACAGGCGGCAATTTGGGATTTGTTGAGAAGCTGGTGAGCTTAATGTGGAAACGATCACTGCCGCTTACACAGGAGGATTTGTATGGGAATACTGCGCTTGCTGTTGCCGCCATTGTTGGAAATGTGAAAGCTGCAGAAATCTTGGTCGGGAAAGATGAGATGTTGCCGGCGATGAGAAACCGGGTGAATTACTCGCCGTTGCATCTGGCGGCGAAATATGGGCACAGAGATATGGTTTTGTATCTTCTAGGCGTAACAAAGGACGAAGGGATATTCACCGGTCAATCTGGTGCTAGGCTTCTCAATCTTCTCATTTCATTTGATATCTATGATGTAGCTCTTGATATATTAAATCAACAGCCGAAGTTGGCGGTGGAACAAGATCAATACGGATTCACAGCTCTACAAATGTTGGCTGAAAAACCAGATGTGTTTGAGAGTGGAACAACTCAGCTTGGGCGTTGCCGACGCATCCTTCATCCTCGCTCCCGTGTTGCTGTGGAAGTCTTCGATGCTTCTGATCATCTGCCCATGCAACAAAGTTATATCGAAAGTCCTCCTGAAATCTCAAACAATGCAGGAGTGTTGATGAAGAATGTTTATAGGAAAAAGCATAATAAGAAGCATGAGGAAGCATCTGCAAGAATGGGGAGTGTTGAAGTTGCCATAGCAATTGTAAGAGTTTATCCTTATTCAATTTGGTTCCGCGATAGCCGTGAATGCAATATATTTCAGCTCGCTGTTCTTCATCGTCAACACAAGATTTATAATCTTATATATCAAATGACTTCACACAAGTATTTTGCAGCAGCTTTTCTTGACAATAATGATAACAACATCTTGCATTTAGCTGGTGAGCTTGTTCCATCTCATTCAATCTCTGGTGCAGCTTTGCAATTGCAACGAGAATTGCAATGGTTTAAGGAAGTTGAAAGATTAGTGCTACCATCTTACAAAAGCATGACAAACAAAGATAACAAAACACCAAGAATGGTATTTAGTGAAGAACATGAAGAGCTAGTTCACGAAGGTGAAAAATGGATGAAGAACACTGCTTCATCGTACACCGTTGTTGCGGCGCTCATTGCGACGGTTGCATTTGCAGCAATTTTCACTGTACCTGGTGGCAACGACAATGATCAAGGCATCCCTATTCTCATTAACCACAAATTCTTCATGGTTTTTGTAGCAGCAGATGCATTAGCATTAATCACTTCATCTGCTTCAGTAATAATGTTTTTAGGAATACTCACTTCGCGCTACGCAGAAGACGATTTTCTCAAGGCGTTACCTTCGAGATTGATTATCGGTCTCGTCTCATTGTTCATCTCTATATTATCCATGGTAGCAGCCTTCAGTGCATCCCTTTGCCTAGTTCTTGTTCATCAACTGAGATGGGTGTGGGCTCCAATGATAGTATTTGCCTTGGTTCCTGTTATCTTATTTGCCATGTTGCAATTTCCTCTTTTGGTGCAAATGACATCTTCCACATATGGGCCTAGCATTTTTGGTTTGCAAAAACCTATTCCCTACTTTTCGGCTCTCATTATCTCGCCGCCGCTCCTTCTCTTTGGTTGCTCTAATTCGAAGCTTGCGAAAGAGCTTCAGAGTTTTTCCTTTACAATCCATTCGATTTTGCTCCTGTTTTTAGATCCGTGTTCTGTGATCGACGTTGAGAGAGAGAATGGCTTCTCGTTTCTGGACCCAGGTATTGCGTTCAGTCTAAACGGTGGTGGCAGTGGTTCTGATTCTGAAGCGGAGGAGAGTGACTATGGTGAAGAGCTTGACGACGTACAGGTTGATCCTGGCTCCCAACCGAACAGAAGCAGATATCTGCAAGGGAATGCCAGTGACAGCGAAGATTCTGAGGATAAGAAGCGTACTGTCAGGTCGGCTAAAGATAAGCGTTTTGAGGAGATGTCTGCTACTGTGGATCAGATGAAAAATGCAATGAAGATCAATGACTGGGTTAGCCTGCAGGAGAGTTTTGATAAAATAAATAAGCAGCTTGAGAAAGTCATGCGTGTTACTGAGTCTGAGAAGGTGCCGACTCTTTATATTAAAGCACTCGTGATGCTAGAGGACTTCCTAAATGAAGCCATGGCCAATAAGGAAGCAAGGAAGAAAATGAGTACTAGCAATTCTAAGGCCTTAAATTCAATGAAACAGAAGCTAAAGAAGAACAATAAGCAATATGAAGAGGTAATTGCCAAGTATAGGGAGAATCCTGAGATTGAGGAAGAAAAGGCTGATGAGCTGGAGGAGGAGGAGGAGGATGATGATGAATCTGAATATGAGGATGATCCTTCTAAAATCATGTCAGATTCAGAGCCAGAGCCAGATGTAGATGAAGAAGAAGATCTAGATGATCCAAGTCAAAACTGGGAGAAGAAGAAGAGCAAAAAAAATAAGCTCATGGATAAGCAGTTTATGAAGGATCCTAGTGAGATCACATGGGACACTGTGAACAAGAAATTTAAGGAGGTTGTGGCTGCTCGGGGTAGGAAGGGAACTGGAAGATTTGAGCAGGTTGAACAGCTTACATTCTTAACAAAAGTTGCTAAGACCCCTGCACAAAAGCTTGAGATTTTGTTTAGTGTTGTATCTGCTCAATTTGATGTTAATCCAGGTCTCAGTGGGCATATGCCTATCAGTGTGTGGAAGAAGTGTGTGCAGAACATGCTTTCTATAATTGACATTCTTGTGCAGAATTCCAACATTGTGGTGGATGATATGGTTGAACCTGATGAGAATGAAAGCCAGAAGCCAGCAGACTATAAGGGAACAATACGTGTTTGGGGAAACTTGGTTGCTTTTGTTGAGAGGATTGACACTGAGTTTTTTAAGAGTTTGCAGTGTATTGACCCACATACACGTGAGTATGTTGAAAGACTCAGAGATGAGCCAATGTTTATGGTTCTTGCTCAGAATGTCCAAGCATATTTGGAACGAGTTGGGGATTACAAAGCAGCTTCGAAAGTTGCCCTGAGGCGTGTTGAACTGATCTATTACAAACCACAAGAGGTTTATGATGCCATGAGAAAGCTTGCAGAGCTGTCAGAAGATGGAGATAGTGGAGATGCAAGTGAGGAGGCTAAAGTGGTTGAAGAGAGCAGGGGCCCTGCGGCATTTGTTGTCACTCCAGAGCTTGTACCTCGTAAACCCACCTTTCCAGAGAGTAGTAGGGCTTTTATGGACATTCTGGTAACCCTTATCTACCAATATGGAGATGAGCGCACTAAAGCACGAGCTATGCTCTGTGATATTTATCACCATGCTCTCTTGGATGAATTTTATATTTCTCGTGACTTGTTACTGATGAGTCACTTACAGGATAGTATTCAACATTTGGACATTTCAACGCAGATCCTTTTCAATAGGGCAATGGCTCAACTTGGTTTATGTGGCTTTCGGGTTGGCCTGATTAGTGAAGGACATGGCTGTCTTTCAGAATTATATTCTGGTGGAAGGGTGAAGGAATTGCTCGCACAAGGTGTCTCACAAAGCCGATACCATGAAAAGACTCCAGAACAGGAAAGGCTTGAAAGAAGAAGGCAGATGCCATACCACATGCACATAAATCTTGAGCTCCTGGAGGCTGTGCATTTAATATGTGCTATGCTGCTGGAAGTACCCAACATGGCAGGCAATGTTCATGATGCCAAGCGCAAGGTTATTAGTAAGAACTTTAGACGGTTACTTGAGGTGAGTGAGAGACAAACGTTTACGGGTCCTCCTGAGAATGTCAGAGATCATGTAATGGCTGCTACTCGGGCCCTTCGCAAGGGTGATTTCCAGAAGGCTTTTGATGTCATTGCATCTCTAGATGTATGGAAGCTACTTAGGAATCGTGATGAAGTGCTGGAAATGGTAAAAGGGAAAATCAAGGAGGAGGCTTTGAGGACTTACCTTCTCACATACTCTTCGTCCTATGATTCTCTGAGTTCGGACCAACTCACCCAAATGTTCGACCTTGCAGAGGGTCAAACACACAGCATTGTGAGCAAGATGATGATCAATGAGGAGCTCCATGCAAGTTGGGATCAGCCAAGCGGGTGTGTCATCTTCCACGATGTTACACACACCCGATTACAAGGCCTGGCCTTCCAACTGGCTGATAAGTTGTCAATCCTTGCTGAAAGTAACGAGAGAGCAGTTGAGGCAAGAATAGGAGGAGGATTAGATTTACCAATGAGGCGAAGAGACAACCAAGAATATGCTGCTGGAGGGGCTGTAGGAGGGAGTAGCAGGTGGCCAGATAACATGTCGTATAACCAAGGAAGGCATGGCGGTCCTAGTTCGCGTGCAGGATATAGCAGCGGTGGGCGAGGCCAAGGTGGGGCTGGTGGATATTCTAGAGACCGGATGGGTCAGTCTCGAGGAGGCAATGCAGGATATCAAAGCACTCGTTATCAAGACGCCGCATATGGATCAGGGAGGACTGCTTATCAGTCGGGTTCTGCCCGAGGATCCCAGATGGATGCTTCAGCTCGCATGTCTGAAGTGTCTGTTTACTACATAGCGCCGCGAAAGTCATCAGTGACTTTTGCAGGCCGACTGCCGTGTAACCATTGGCAATCTTAG 5097 44.36 MKSIKSSGLNMEQPIRGSFDEGQYRSRSIHSDAARIDLDKKVKKVRGRRKTKNSWKQDSEKSFKEKRTIESLFEKDFVERLRNRIQIQTRFHFEDTEKYLPSDELGTIIRSDQARMAETIWEESVIRLAPLYRAALMGEWEIAEAIFKQDSRAITSEISLLNETALHVAVGTGGNLGFVEKLVSLMWKRSLPLTQEDLYGNTALAVAAIVGNVKAAEILVGKDEMLPAMRNRVNYSPLHLAAKYGHRDMVLYLLGVTKDEGIFTGQSGARLLNLLISFDIYDVALDILNQQPKLAVEQDQYGFTALQMLAEKPDVFESGTTQLGRCRRILHPRSRVAVEVFDASDHLPMQQSYIESPPEISNNAGVLMKNVYRKKHNKKHEEASARMGSVEVAIAIVRVYPYSIWFRDSRECNIFQLAVLHRQHKIYNLIYQMTSHKYFAAAFLDNNDNNILHLAGELVPSHSISGAALQLQRELQWFKEVERLVLPSYKSMTNKDNKTPRMVFSEEHEELVHEGEKWMKNTASSYTVVAALIATVAFAAIFTVPGGNDNDQGIPILINHKFFMVFVAADALALITSSASVIMFLGILTSRYAEDDFLKALPSRLIIGLVSLFISILSMVAAFSASLCLVLVHQLRWVWAPMIVFALVPVILFAMLQFPLLVQMTSSTYGPSIFGLQKPIPYFSALIISPPLLLFGCSNSKLAKELQSFSFTIHSILLLFLDPCSVIDVERENGFSFLDPGIAFSLNGGGSGSDSEAEESDYGEELDDVQVDPGSQPNRSRYLQGNASDSEDSEDKKRTVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPTLYIKALVMLEDFLNEAMANKEARKKMSTSNSKALNSMKQKLKKNNKQYEEVIAKYRENPEIEEEKADELEEEEEDDDESEYEDDPSKIMSDSEPEPDVDEEEDLDDPSQNWEKKKSKKNKLMDKQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLSGHMPISVWKKCVQNMLSIIDILVQNSNIVVDDMVEPDENESQKPADYKGTIRVWGNLVAFVERIDTEFFKSLQCIDPHTREYVERLRDEPMFMVLAQNVQAYLERVGDYKAASKVALRRVELIYYKPQEVYDAMRKLAELSEDGDSGDASEEAKVVEESRGPAAFVVTPELVPRKPTFPESSRAFMDILVTLIYQYGDERTKARAMLCDIYHHALLDEFYISRDLLLMSHLQDSIQHLDISTQILFNRAMAQLGLCGFRVGLISEGHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAGNVHDAKRKVISKNFRRLLEVSERQTFTGPPENVRDHVMAATRALRKGDFQKAFDVIASLDVWKLLRNRDEVLEMVKGKIKEEALRTYLLTYSSSYDSLSSDQLTQMFDLAEGQTHSIVSKMMINEELHASWDQPSGCVIFHDVTHTRLQGLAFQLADKLSILAESNERAVEARIGGGLDLPMRRRDNQEYAAGGAVGGSSRWPDNMSYNQGRHGGPSSRAGYSSGGRGQGGAGGYSRDRMGQSRGGNAGYQSTRYQDAAYGSGRTAYQSGSARGSQMDASARMSEVSVYYIAPRKSSVTFAGRLPCNHWQS 1698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10064983 10081865 - CePI673135_05g011260.1 Cec05g1126 202929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1126 1698 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 743 1608 IPR027516 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro)
Cec05g1126 1698 MobiDBLite consensus disorder prediction 748 807 - -
Cec05g1126 1698 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 1461 1549 IPR000717 -
Cec05g1126 1698 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 787 1392 IPR008905 GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro)
Cec05g1126 1698 MobiDBLite consensus disorder prediction 40 60 - -
Cec05g1126 1698 SUPERFAMILY Ankyrin repeat 130 434 IPR036770 -
Cec05g1126 1698 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 752 1633 IPR027516 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0005852(PANTHER)|GO:0006413(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)|GO:0031369(InterPro)
Cec05g1126 1698 MobiDBLite consensus disorder prediction 773 787 - -
Cec05g1126 1698 ProSiteProfiles Ankyrin repeat region circular profile. 233 254 - -
Cec05g1126 1698 Pfam Ankyrin repeats (3 copies) 166 254 IPR002110 GO:0005515(InterPro)
Cec05g1126 1698 ProSiteProfiles PCI domain profile. 1360 1532 IPR000717 -
Cec05g1126 1698 MobiDBLite consensus disorder prediction 1 26 - -
Cec05g1126 1698 Gene3D - 119 459 IPR036770 -
Cec05g1126 1698 SMART ANK_2a 161 191 IPR002110 GO:0005515(InterPro)
Cec05g1126 1698 SMART ANK_2a 233 262 IPR002110 GO:0005515(InterPro)
Cec05g1126 1698 SMART ANK_2a 199 228 IPR002110 GO:0005515(InterPro)
Cec05g1126 1698 MobiDBLite consensus disorder prediction 878 974 - -
Cec05g1126 1698 Pfam Domain of unknown function 516 630 IPR026961 -
Cec05g1126 1698 MobiDBLite consensus disorder prediction 1579 1638 - -
Cec05g1126 1698 MobiDBLite consensus disorder prediction 918 939 - -
Cec05g1126 1698 MobiDBLite consensus disorder prediction 897 917 - -
Cec05g1126 1698 SUPERFAMILY Winged helix DNA-binding domain 1456 1531 IPR036390 -
Cec05g1126 1698 ProSiteProfiles Ankyrin repeat profile. 233 254 IPR002110 GO:0005515(InterPro)
Cec05g1126 1698 Coils Coil 886 927 - -
Cec05g1126 1698 MobiDBLite consensus disorder prediction 1589 1604 - -
Cec05g1126 1698 MobiDBLite consensus disorder prediction 788 807 - -
Cec05g1126 1698 Pfam PCI domain 1457 1529 IPR000717 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0431 Cec-Chr3:4703186 Cec05g1126 Cec-Chr5:10064983 7.60E-91 dispersed
Cec03g0439 Cec-Chr3:4766903 Cec05g1126 Cec-Chr5:10064983 2.00E-81 dispersed
Cec05g1126 Cec-Chr5:10064983 Cec07g0077 Cec-Chr7:769055 1.10E-18 dispersed
Cec05g1126 Cec-Chr5:10064983 Cec05g1127 Cec-Chr5:10092441 1.10E-215 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1126 K03252 - csv:101203990 1641.71