Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1135 ATGGAGATGAATCTCCCCAACTACTGGCCGGCCGAGAAAAATGGCGAAGAGAAGAAGAAGGAAGATCATAAGCAAGGAAACGAAGATGACGACGACAACGATAGCGATAGCGACATGCCGTCGTCGTTGAGCCTTAGAGAGCTTTCTAAGGTTATACTTCCACCTTTGGGAGTTTCAAGCTTTACTGATGACAATAAAGTCCATTCCAATAGATGGATCATCTCCCCCATGAGCTCAAGATACAGGTGGTGGCAGTCGTTCATGGTGGTTTTGGTTGCTTACTCGGTGTGGGTTTACCCATTGGAAGTGGCGTTTATGGACGCAATTCCCAAGCGCCAATTATTAATTGCAGACAGTATTGTTGATCTTTTCTTCGCCATTGATATCTTCTTCACCTTCTTCGTTGCTTACATTGATCATCACACTCAGCTTCTCGTTCGTGATTCTAAGAAGATAGCTATCAGGTACTTGTCAACATGGTTCTTGATGGATTTAGCATCAACAATCCCATTTGAGACGCTGGCCTATCTGTCCACAGGCAAATATGATCTTTGTCTCCCTTTTGCCCTCCTAGGATTGCTCAGATTTTGGCGATTGCGACGTGTCAAGCAATTTTTTACCAGGCTTGAGAAGGACATTAGATTCAGCTACTTTTGGGTTCGATGTGCTAGGCTCCTATCTGTCACTTTATTTTATGTCCATTGTGCCGGATGCCTCTACTACTTGTTGGCTGATCGATATCCACATGAAGGGAAGACCTGGATCGCAACCTTATTTCCAAATTTCAAAGAGATTAGCCTTGGAGTGAGATATACTTCAGCCATGTATTGGTCTATCACCACAATGACCACTGTTGGTTATGGTGATCTTCATGCTGTGAACACCGCGGAGATGATCTTTATCATTTTCTACATGCTCTTCAATCTCGGGCTAACTGCTTACTTGATCGGTAACATGACAAACTTAGTCGTTGAAGGAACTCGCCGCACAATGGAATTTAGAAACAGCATCGAAATGGCTTCAAATTTTGTTAACCGAAATCGCCTGCCTTCGAGGGTGAGGGAACACATATTGGCATACATGTGCTTGAGATTCAAGGCTGAGAGCCTAAACCAACAACAGCTGATTGAACAGCTTCCAAAGTCAATTTGCAAAAGCATCTGTCAGCAATTGTTTTTGCCGACCGTGGAGAAAGTCTACCTCTTCAAGGGCGTCTCAAAGGAAACACTTGTGGTGCTGGTAGCGAAGATGAAAGCTGAGTATATACCGCCTAAGGAGGACGTGATAATACAAAACGACATTCCTGATGAAGTTTATATCATTGTGTCTGGGGAAATTGAAATTATTGACTGTGAGATGGATGTGGAACGGATTGTTGGGACGTTACAGTGTGGCAGTATGTTTGGGGAAGTAGGAGCACTTTGTTGCAAAAACCAAAATTTTACATACAGAACCAGAACTCTTTCACAGCTCTTGAAGCTGAAAACAAGTGTACTACAAGAAGCTATGCATATCAAACAAGCAGACAGTATGATCATTGTCAAGAACTTCCTTCAGGAAAGGGAGCTCAGCCACAAAATCACCATAGAAGGTTCGCCCGAAAAAGAGGTGCCAACGTTGATTGAAGAAAAGGATCAAAGTTTCAATTGGAAACACTCCATTGAATTAGATTTTGCTAGAGTGAACATATACAAAGGCCATCCAGTAGCCAGAAAACAGGCTTCTTGTGATGATCCTGGGAAGCTGATCAGACTGCCACATTCAATGGAGGAGCTCAAAAAAATTGCAGGTGAAAAGTTTGGATTTGATGCAAGAAATGCTGTTTTGACAAATGAAGAAGGCTCTGAAATTGATTCTATTGATGTGATAAGGGATAATGATAAGCTTTTTTTTTTCATAGTTGCAGATGATAAATCCCTGTAA 1923 42.28 MEMNLPNYWPAEKNGEEKKKEDHKQGNEDDDDNDSDSDMPSSLSLRELSKVILPPLGVSSFTDDNKVHSNRWIISPMSSRYRWWQSFMVVLVAYSVWVYPLEVAFMDAIPKRQLLIADSIVDLFFAIDIFFTFFVAYIDHHTQLLVRDSKKIAIRYLSTWFLMDLASTIPFETLAYLSTGKYDLCLPFALLGLLRFWRLRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFYVHCAGCLYYLLADRYPHEGKTWIATLFPNFKEISLGVRYTSAMYWSITTMTTVGYGDLHAVNTAEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEMASNFVNRNRLPSRVREHILAYMCLRFKAESLNQQQLIEQLPKSICKSICQQLFLPTVEKVYLFKGVSKETLVVLVAKMKAEYIPPKEDVIIQNDIPDEVYIIVSGEIEIIDCEMDVERIVGTLQCGSMFGEVGALCCKNQNFTYRTRTLSQLLKLKTSVLQEAMHIKQADSMIIVKNFLQERELSHKITIEGSPEKEVPTLIEEKDQSFNWKHSIELDFARVNIYKGHPVARKQASCDDPGKLIRLPHSMEELKKIAGEKFGFDARNAVLTNEEGSEIDSIDVIRDNDKLFFFIVADDKSL 640
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 10193002 10199819 - CePI673135_05g011350.1 Cec05g1135 202938
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1135 640 MobiDBLite consensus disorder prediction 12 27 - -
Cec05g1135 640 FunFam Potassium channel KAT3 83 325 - -
Cec05g1135 640 SUPERFAMILY cAMP-binding domain-like 328 518 IPR018490 -
Cec05g1135 640 SUPERFAMILY Voltage-gated potassium channels 76 324 - -
Cec05g1135 640 Gene3D Jelly Rolls 368 537 IPR014710 -
Cec05g1135 640 MobiDBLite consensus disorder prediction 1 41 - -
Cec05g1135 640 PANTHER POTASSIUM CHANNEL AKT1 28 544 IPR045319 GO:0005249(InterPro)|GO:0006813(InterPro)
Cec05g1135 640 SMART cnmp_10 401 518 IPR000595 -
Cec05g1135 640 ProSiteProfiles KHA domain profile. 560 640 IPR021789 -
Cec05g1135 640 Pfam KHA, dimerisation domain of potassium ion channel 560 631 IPR021789 -
Cec05g1135 640 FunFam Potassium channel KAT2 389 524 - -
Cec05g1135 640 Gene3D - 83 324 - -
Cec05g1135 640 Pfam Ion transport protein 81 330 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g1135 640 PRINTS EAG/ELK/ERG potassium channel family signature 297 308 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cec05g1135 640 PRINTS EAG/ELK/ERG potassium channel family signature 315 324 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cec05g1135 640 PRINTS EAG/ELK/ERG potassium channel family signature 271 288 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cec05g1135 640 PRINTS EAG/ELK/ERG potassium channel family signature 118 128 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cec05g1135 640 ProSiteProfiles cAMP/cGMP binding motif profile. 401 520 IPR000595 -
Cec05g1135 640 Pfam Cyclic nucleotide-binding domain 421 503 IPR000595 -
Cec05g1135 640 CDD CAP_ED 401 504 IPR000595 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1135 Cec-Chr5:10193002 Cec05g1905 Cec-Chr5:31096237 4.30E-130 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1135 K21867 - csv:101205212 1165.21