Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g1135 | ATGGAGATGAATCTCCCCAACTACTGGCCGGCCGAGAAAAATGGCGAAGAGAAGAAGAAGGAAGATCATAAGCAAGGAAACGAAGATGACGACGACAACGATAGCGATAGCGACATGCCGTCGTCGTTGAGCCTTAGAGAGCTTTCTAAGGTTATACTTCCACCTTTGGGAGTTTCAAGCTTTACTGATGACAATAAAGTCCATTCCAATAGATGGATCATCTCCCCCATGAGCTCAAGATACAGGTGGTGGCAGTCGTTCATGGTGGTTTTGGTTGCTTACTCGGTGTGGGTTTACCCATTGGAAGTGGCGTTTATGGACGCAATTCCCAAGCGCCAATTATTAATTGCAGACAGTATTGTTGATCTTTTCTTCGCCATTGATATCTTCTTCACCTTCTTCGTTGCTTACATTGATCATCACACTCAGCTTCTCGTTCGTGATTCTAAGAAGATAGCTATCAGGTACTTGTCAACATGGTTCTTGATGGATTTAGCATCAACAATCCCATTTGAGACGCTGGCCTATCTGTCCACAGGCAAATATGATCTTTGTCTCCCTTTTGCCCTCCTAGGATTGCTCAGATTTTGGCGATTGCGACGTGTCAAGCAATTTTTTACCAGGCTTGAGAAGGACATTAGATTCAGCTACTTTTGGGTTCGATGTGCTAGGCTCCTATCTGTCACTTTATTTTATGTCCATTGTGCCGGATGCCTCTACTACTTGTTGGCTGATCGATATCCACATGAAGGGAAGACCTGGATCGCAACCTTATTTCCAAATTTCAAAGAGATTAGCCTTGGAGTGAGATATACTTCAGCCATGTATTGGTCTATCACCACAATGACCACTGTTGGTTATGGTGATCTTCATGCTGTGAACACCGCGGAGATGATCTTTATCATTTTCTACATGCTCTTCAATCTCGGGCTAACTGCTTACTTGATCGGTAACATGACAAACTTAGTCGTTGAAGGAACTCGCCGCACAATGGAATTTAGAAACAGCATCGAAATGGCTTCAAATTTTGTTAACCGAAATCGCCTGCCTTCGAGGGTGAGGGAACACATATTGGCATACATGTGCTTGAGATTCAAGGCTGAGAGCCTAAACCAACAACAGCTGATTGAACAGCTTCCAAAGTCAATTTGCAAAAGCATCTGTCAGCAATTGTTTTTGCCGACCGTGGAGAAAGTCTACCTCTTCAAGGGCGTCTCAAAGGAAACACTTGTGGTGCTGGTAGCGAAGATGAAAGCTGAGTATATACCGCCTAAGGAGGACGTGATAATACAAAACGACATTCCTGATGAAGTTTATATCATTGTGTCTGGGGAAATTGAAATTATTGACTGTGAGATGGATGTGGAACGGATTGTTGGGACGTTACAGTGTGGCAGTATGTTTGGGGAAGTAGGAGCACTTTGTTGCAAAAACCAAAATTTTACATACAGAACCAGAACTCTTTCACAGCTCTTGAAGCTGAAAACAAGTGTACTACAAGAAGCTATGCATATCAAACAAGCAGACAGTATGATCATTGTCAAGAACTTCCTTCAGGAAAGGGAGCTCAGCCACAAAATCACCATAGAAGGTTCGCCCGAAAAAGAGGTGCCAACGTTGATTGAAGAAAAGGATCAAAGTTTCAATTGGAAACACTCCATTGAATTAGATTTTGCTAGAGTGAACATATACAAAGGCCATCCAGTAGCCAGAAAACAGGCTTCTTGTGATGATCCTGGGAAGCTGATCAGACTGCCACATTCAATGGAGGAGCTCAAAAAAATTGCAGGTGAAAAGTTTGGATTTGATGCAAGAAATGCTGTTTTGACAAATGAAGAAGGCTCTGAAATTGATTCTATTGATGTGATAAGGGATAATGATAAGCTTTTTTTTTTCATAGTTGCAGATGATAAATCCCTGTAA | 1923 | 42.28 | MEMNLPNYWPAEKNGEEKKKEDHKQGNEDDDDNDSDSDMPSSLSLRELSKVILPPLGVSSFTDDNKVHSNRWIISPMSSRYRWWQSFMVVLVAYSVWVYPLEVAFMDAIPKRQLLIADSIVDLFFAIDIFFTFFVAYIDHHTQLLVRDSKKIAIRYLSTWFLMDLASTIPFETLAYLSTGKYDLCLPFALLGLLRFWRLRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFYVHCAGCLYYLLADRYPHEGKTWIATLFPNFKEISLGVRYTSAMYWSITTMTTVGYGDLHAVNTAEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEMASNFVNRNRLPSRVREHILAYMCLRFKAESLNQQQLIEQLPKSICKSICQQLFLPTVEKVYLFKGVSKETLVVLVAKMKAEYIPPKEDVIIQNDIPDEVYIIVSGEIEIIDCEMDVERIVGTLQCGSMFGEVGALCCKNQNFTYRTRTLSQLLKLKTSVLQEAMHIKQADSMIIVKNFLQERELSHKITIEGSPEKEVPTLIEEKDQSFNWKHSIELDFARVNIYKGHPVARKQASCDDPGKLIRLPHSMEELKKIAGEKFGFDARNAVLTNEEGSEIDSIDVIRDNDKLFFFIVADDKSL | 640 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 10193002 | 10199819 | - | CePI673135_05g011350.1 | Cec05g1135 | 202938 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g1135 | 640 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
| Cec05g1135 | 640 | FunFam | Potassium channel KAT3 | 83 | 325 | - | - | |
| Cec05g1135 | 640 | SUPERFAMILY | cAMP-binding domain-like | 328 | 518 | IPR018490 | - | |
| Cec05g1135 | 640 | SUPERFAMILY | Voltage-gated potassium channels | 76 | 324 | - | - | |
| Cec05g1135 | 640 | Gene3D | Jelly Rolls | 368 | 537 | IPR014710 | - | |
| Cec05g1135 | 640 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Cec05g1135 | 640 | PANTHER | POTASSIUM CHANNEL AKT1 | 28 | 544 | IPR045319 | GO:0005249(InterPro)|GO:0006813(InterPro) | |
| Cec05g1135 | 640 | SMART | cnmp_10 | 401 | 518 | IPR000595 | - | |
| Cec05g1135 | 640 | ProSiteProfiles | KHA domain profile. | 560 | 640 | IPR021789 | - | |
| Cec05g1135 | 640 | Pfam | KHA, dimerisation domain of potassium ion channel | 560 | 631 | IPR021789 | - | |
| Cec05g1135 | 640 | FunFam | Potassium channel KAT2 | 389 | 524 | - | - | |
| Cec05g1135 | 640 | Gene3D | - | 83 | 324 | - | - | |
| Cec05g1135 | 640 | Pfam | Ion transport protein | 81 | 330 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cec05g1135 | 640 | PRINTS | EAG/ELK/ERG potassium channel family signature | 297 | 308 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cec05g1135 | 640 | PRINTS | EAG/ELK/ERG potassium channel family signature | 315 | 324 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cec05g1135 | 640 | PRINTS | EAG/ELK/ERG potassium channel family signature | 271 | 288 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cec05g1135 | 640 | PRINTS | EAG/ELK/ERG potassium channel family signature | 118 | 128 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cec05g1135 | 640 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 401 | 520 | IPR000595 | - | |
| Cec05g1135 | 640 | Pfam | Cyclic nucleotide-binding domain | 421 | 503 | IPR000595 | - | |
| Cec05g1135 | 640 | CDD | CAP_ED | 401 | 504 | IPR000595 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec05g1135 | Cec-Chr5:10193002 | Cec05g1905 | Cec-Chr5:31096237 | 4.30E-130 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g1135 | K21867 | - | csv:101205212 | 1165.21 |