Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g1190 | ATGAAGGAACTGAAAGACTTGACAGCCAAACATCCTTGGGCAGTTCTTGAACATGCTGTTGAAGCTAATCAATGCCAAGAACACCATGGAGATCGGTGTCTATACTGGCTATTCCCTCCTCGCCACTGCCCTCTACCGGACGACAGAAAGATACTGGCAATGGATATTAATAGAGAAAACTATGGACTTGGGCTTCCGGTGATCCAGAAAGCCGGTGTGGCCGATCAACGCCTTGCTGACGAGAAAAAACATGGGACATATGATTTCATCTTCGTGGATGCTGACTACAAGAGGTTAATTGATCTTGTCAAAGTTGGAGGAGTAATCGGCTACGACAACACACTATGGAATGGTTCTGTCGTGGCACCACCTGATGCACACGTACGTAAGTATGTACAATATTACTGGGACTTTGTGCTAGAGCTCAACAAAGCTCTTGCTCTAGACCCTAGGATTAAAATTTGCATGCTTCCATTGGCAATGGAATCACTCATCATCAAATCAAATGAAAGGATTTGCAAGTCTACAATTCCTACCCACATCTAA | 546 | 44.32 | MKELKDLTAKHPWAVLEHAVEANQCQEHHGDRCLYWLFPPRHCPLPDDRKILAMDINRENYGLGLPVIQKAGVADQRLADEKKHGTYDFIFVDADYKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAHVRKYVQYYWDFVLELNKALALDPRIKICMLPLAMESLIIKSNERICKSTIPTHI | 181 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 10908247 | 10909928 | + | CePI673135_05g011900.1 | Cec05g1190 | 202993 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g1190 | 181 | Gene3D | Vaccinia Virus protein VP39 | 43 | 168 | IPR029063 | - | |
| Cec05g1190 | 181 | PANTHER | O-METHYLTRANSFERASE-RELATED | 45 | 160 | IPR050362 | GO:0008757(PANTHER) | |
| Cec05g1190 | 181 | Pfam | O-methyltransferase | 45 | 160 | IPR002935 | GO:0008171(InterPro) | |
| Cec05g1190 | 181 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 45 | 159 | IPR029063 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec05g1190 | Cec-Chr5:10908247 | Cec11g1430 | Cec-Chr11:28449989 | 2.00E-16 | dispersed | |
| Cec05g1190 | Cec-Chr5:10908247 | Cec02g0629 | Cec-Chr2:6340212 | 1.60E-50 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g1190 | K00588 | - | ath:AT4G34050 | 197.978 |