Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g1197 | ATGGCAATGCATCGGTACGTACAAGCTGATGATGATGCCCAAACCCATTTGTTTCCACTCGATTCTTTGTTTTGTGAAGAGGAGAAATGGGAGGAGGAGGAGCAGGAGGAAGATGTAGCTGAGTTAGAACAAACCCATTTCTCTTCTTTGGGATTTTTGGACGAACATCTCTCCGGGGAAGATGAACGGCTTCTCTCCATGTTGTCTAAGGAAACAGAGCAGCTGAAACAGAGCAATCTCCACCTTGAAGCTTTGTTGATGGATCCTTCTATTTCTGCTACTCGTTCTTCAGCTGTGGACTGGATGCTCAAAGTTCAATCCCATTATGGGTTTTCAACTCTCACTGCCATTTTGGCTGTTGCTTATTTTGACAGATTCCTCCTGAGCTTCCATTTTAAGAGTGACAAGCCGTGGATGAACCAGCTTGTGGCTGTCACTTGCCTCTCTTTGGCGGCTAAAGTGGAGGAGATTCAAGTTCCTCTTCTCTTGGACCTTCAAGTAGAGGATGCTAAGTATGTGTTTGAGGCCAAAACCATTCAGAGAATGGAGCTTCTAGTGCTCTCAACTCTTCAATGGAGGATGCATTTGGTGACTCCATATTCTTTTCTTGATCACATTGTAAAGAGGCTTGGGTTAAAGAACAATCTTCACTTGGAGTTGTTCAGGCGTTCTGAGTATCTTCTCCTCTCTCTACTTTCAGATTCAAGATTTGTGGGTTATCTCCCATCTGTCTTGGCAACTGCAACAATGATGGAAGTGATAGATCAGATTGAGCCTCATAAGACATTGGAGCACCAAGATAAGCTTCTGGGTGTCCTCAAAATGAACAAGGAAAAGGTGCAATGCTGTTACAATCTTGTTGTGGAGCATTCAAAGGCCTATTCCAGTGGCTTTTATCATCCCATCAACTCCCACAAGCGCAAGCATGAACAGCACGCTCCTGATAGCCCAAGTGGTGTGATTGATGCTGGTTTCAGTTCAGACAGCTCCAATGATTCTTGGGCATTTAGGGCAACATCAGTTTGTTCATCACCTGAACCTTCTTTCAAGAAGAGCAAATCTGAAGAGCCAAAGATGAAATTTCATTCTCTTAACAGGGCCTTTCTGGACATTGTTGGCAACCCTTCTTGA | 1131 | 44.12 | MAMHRYVQADDDAQTHLFPLDSLFCEEEKWEEEEQEEDVAELEQTHFSSLGFLDEHLSGEDERLLSMLSKETEQLKQSNLHLEALLMDPSISATRSSAVDWMLKVQSHYGFSTLTAILAVAYFDRFLLSFHFKSDKPWMNQLVAVTCLSLAAKVEEIQVPLLLDLQVEDAKYVFEAKTIQRMELLVLSTLQWRMHLVTPYSFLDHIVKRLGLKNNLHLELFRRSEYLLLSLLSDSRFVGYLPSVLATATMMEVIDQIEPHKTLEHQDKLLGVLKMNKEKVQCCYNLVVEHSKAYSSGFYHPINSHKRKHEQHAPDSPSGVIDAGFSSDSSNDSWAFRATSVCSSPEPSFKKSKSEEPKMKFHSLNRAFLDIVGNPS | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 10987306 | 10988736 | + | CePI673135_05g011970.1 | Cec05g1197 | 203000 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g1197 | 376 | Gene3D | - | 66 | 285 | - | - | |
Cec05g1197 | 376 | FunFam | D3-type cyclin | 88 | 195 | - | - | |
Cec05g1197 | 376 | SMART | Cyclin_C_2 | 197 | 332 | IPR004367 | - | |
Cec05g1197 | 376 | SUPERFAMILY | Cyclin-like | 198 | 259 | IPR036915 | - | |
Cec05g1197 | 376 | CDD | CYCLIN_AtCycD-like_rpt2 | 197 | 287 | - | - | |
Cec05g1197 | 376 | PANTHER | CYCLINS | 60 | 289 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cec05g1197 | 376 | SMART | cyclin_7 | 201 | 289 | IPR013763 | - | |
Cec05g1197 | 376 | SMART | cyclin_7 | 100 | 188 | IPR013763 | - | |
Cec05g1197 | 376 | Pfam | Cyclin, C-terminal domain | 197 | 312 | IPR004367 | - | |
Cec05g1197 | 376 | Coils | Coil | 25 | 45 | - | - | |
Cec05g1197 | 376 | CDD | CYCLIN_AtCycD-like_rpt1 | 95 | 192 | - | - | |
Cec05g1197 | 376 | ProSitePatterns | Cyclins signature. | 95 | 126 | IPR048258 | - | |
Cec05g1197 | 376 | Gene3D | - | 77 | 195 | - | - | |
Cec05g1197 | 376 | Pfam | Cyclin, N-terminal domain | 68 | 194 | IPR006671 | - | |
Cec05g1197 | 376 | FunFam | CYCLIN D32 | 196 | 285 | - | - | |
Cec05g1197 | 376 | SUPERFAMILY | Cyclin-like | 61 | 195 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g1197 | Cec-Chr5:10987306 | Cec08g1670 | Cec-Chr8:28028145 | 1.00E-78 | dispersed | |
Cec04g1445 | Cec-Chr4:34058806 | Cec05g1197 | Cec-Chr5:10987306 | 3.90E-29 | transposed | |
Cec02g0664 | Cec-Chr2:6803829 | Cec05g1197 | Cec-Chr5:10987306 | 5.20E-67 | wgd | |
Cec04g1399 | Cec-Chr4:33623813 | Cec05g1197 | Cec-Chr5:10987306 | 2.40E-71 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g1197 | K14505 | - | csv:101221213 | 643.269 |