Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1201 ATGATGCACACCATGAAACCATCGCAACTTCTGGCTCTGTTTTCCACCTTCACTTTCTGTTTCCCCTGTCTTGCTCTCAACAGCGATGGCATTCTCTTGATTTCTCTCAAACACTCCATTCTCGGCGATCCTTTGTCTGTTTTCGCTAATTGGAATTTCTACGACGACACTCCCTGTTCCTGGCGTGGAGTTACCTGCACCGACCTCCGAGATTATGGCGGCGGATGGTCGGATTTCCTCAGAGTTACTGCCCTCTCCCTCCCTGGCAGCCAGCTTCTGGGCTCCATTCCTGATGAGCTTGGAAGGATCGAACACCTTCGTCTTCTCGATCTTTCCAGTAACTTCTTTAATGGGTCTCTCCCCACTTCCATTTTCAATGCTTCTGAGCTTCAGATTCTTTCTCTTTCCAACAATGTTATCTCCGGCGAGTTGCCGGCGGACATTGGGGGTTTGAAGAGTCTTCAGGTTTTGAATCTCTCTGATAATGCGTTGGCCGGAAAAGTCCCGGGAAATCTCACTGCTCTGAAGAATCTAACTGCTGTTTCTCTGAGGAGTAATTACTTCACCGGAGAGATTCCGGGGAATTTCAGTTCGGTTGAGGTTTTGGATCTGTCTTCCAATTTGTTCAATGGGTCTTTGCCGGCTGATTTTGGTGGGGAGAAGCTGCGGTATTTGAACTTCTCTTACAATAAAATTTCAAGTCCGATTCCGCTGGATTTCGCCAAGAGGATTCCAATGAATGCGACTATGGATCTTTCTTTCAATAATCTCACCGGAGCAATTCCTCAGTCGATTGCTCTGCTCAGCCAGAAAACAGAGGCATTCGCCGGAAATGAAGATCTCTGTGGGAAGCCATTGAAGCACCTCTGTTCAATTCCTTCTTCACTCACAACCCCCCCAAATGTTTCTGAAAGTTCATCTTCGTCTCCAGCAATCGCCGCCATACCCAAAACAATCGGCTCTGTTCCGGCAACACAGTCCCCCCGAGGTCCAAACGGGACACAAACTTCTCAGCCTCAAAACACCATGAAACCCATCACAATAGCTGCAATAGCAGTCGGAGACATCGCCGGAATCGCCATTCTCGCCGTTGTGATTCTCTACGTCTACCACCACCGGAAACGTAAAAACCCCAACTCCAAAACCCCCAAGTCCACCGAGAAGAAGCCACCGATTGACTCAGAACAAGACCCTCAAACTAACCACAAAAAACCCTCATCAGTGTTATTCTGTTTAGCCAACAAGGGAGAAGAGACATCGGAGGCGACGAGTTCTTCCGACGGCGAAGAACAGAGAGAGAAACTCGGAACAACCCACGGCGGAGAGAATAGAGACAGTAAGAAAAACGGCGTGCTGGTGACGGTGGACGGAGAAACAGAGCTGGAATTAGAGACTTTATTAAAGGCATCGGCGTATATACTTGGAGCGAGCGGGGGGAGCATCGTGTACAAGGCGGTGCTGGAGGACGGTACCGCGTTCGCCGTCAGAAGGATCGGCGACGTCAGCGTGGAGAAATTGAGGGATTTTGAGAGCCAAGTGAGAGCCATTGCTAAGGTTCGACATCAAAATTTGGTGAAAATTCGAGGGTTCTTTTGGGGAGAAGATGAGAAGCTCATCATCTATGATTATGTCTCCAATGGCTGCCTTTCAACTTACCTTCACAGAAAACCGAGTTCATCGTCTTCTTCCCAGAGCCATCTATCATTTGAAGTCCGAGTGAAAATCGCGAGAGGAATCGCCCGAGGACTGGCCTTCATCCACGACAAGAAGCAAATCCATGGCAACCTCAAGCCTTCCAACATTCTCTTGAATTCCGAAATGGAGCCCTTAATCGCCGATCTCGGCCTGGACAAGCTCCTCTCCGGCAGATCTAAAATCGCAATCGCCTCCAGTTCTGCCCGGAACTTCGGCAGCCACAGATCCACGCCCAATCGCGAGTACCAAGACGCCAACGGCGGAAGCCCGTCGGTAAGCCTGGGATCGGCGTACCAGGCGCCGGAATCGCTTAAGAATGTGAAAGCGAGCCCTAAATGGGATGTGTACTCGTTCGGGGTGATTCTGCTGGAGGTTGTGAGCGGGAAGATTGTGACGGAGAGGGAATTAGGCGGCGGTGAAGAGGAGGGGCGGATTAAGAAAATGGTGGATTTGGCGATTAGAGGGGAAGTGGAAGGGAAAGAAGAGGCGGTGATGGGGATTTTTAGATTAGGGTTTAGCTGTGTTAGCTTTTTGCCTCAAAAAAGACCCACCATGAAAGAGGCTCTCCAAGTTCTTGACAAAATTTCTTCCATCATTTCTTCTTCTAACACCTAA 2310 49.52 MMHTMKPSQLLALFSTFTFCFPCLALNSDGILLISLKHSILGDPLSVFANWNFYDDTPCSWRGVTCTDLRDYGGGWSDFLRVTALSLPGSQLLGSIPDELGRIEHLRLLDLSSNFFNGSLPTSIFNASELQILSLSNNVISGELPADIGGLKSLQVLNLSDNALAGKVPGNLTALKNLTAVSLRSNYFTGEIPGNFSSVEVLDLSSNLFNGSLPADFGGEKLRYLNFSYNKISSPIPLDFAKRIPMNATMDLSFNNLTGAIPQSIALLSQKTEAFAGNEDLCGKPLKHLCSIPSSLTTPPNVSESSSSSPAIAAIPKTIGSVPATQSPRGPNGTQTSQPQNTMKPITIAAIAVGDIAGIAILAVVILYVYHHRKRKNPNSKTPKSTEKKPPIDSEQDPQTNHKKPSSVLFCLANKGEETSEATSSSDGEEQREKLGTTHGGENRDSKKNGVLVTVDGETELELETLLKASAYILGASGGSIVYKAVLEDGTAFAVRRIGDVSVEKLRDFESQVRAIAKVRHQNLVKIRGFFWGEDEKLIIYDYVSNGCLSTYLHRKPSSSSSSQSHLSFEVRVKIARGIARGLAFIHDKKQIHGNLKPSNILLNSEMEPLIADLGLDKLLSGRSKIAIASSSARNFGSHRSTPNREYQDANGGSPSVSLGSAYQAPESLKNVKASPKWDVYSFGVILLEVVSGKIVTERELGGGEEEGRIKKMVDLAIRGEVEGKEEAVMGIFRLGFSCVSFLPQKRPTMKEALQVLDKISSIISSSNT 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11034017 11038349 - CePI673135_05g012010.1 Cec05g1201 203004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1201 769 ProSiteProfiles Protein kinase domain profile. 468 764 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1201 769 MobiDBLite consensus disorder prediction 375 449 - -
Cec05g1201 769 MobiDBLite consensus disorder prediction 635 656 - -
Cec05g1201 769 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515(InterPro)
Cec05g1201 769 MobiDBLite consensus disorder prediction 321 341 - -
Cec05g1201 769 Gene3D Phosphorylase Kinase; domain 1 436 543 - -
Cec05g1201 769 PANTHER OS05G0588300 PROTEIN 169 761 IPR050994 -
Cec05g1201 769 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Cec05g1201 769 Pfam Protein kinase domain 474 755 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1201 769 Gene3D Ribonuclease Inhibitor 195 291 IPR032675 -
Cec05g1201 769 Gene3D Ribonuclease Inhibitor 26 194 IPR032675 -
Cec05g1201 769 MobiDBLite consensus disorder prediction 380 400 - -
Cec05g1201 769 FunFam Leucine-rich repeat receptor-like protein kinase 198 292 - -
Cec05g1201 769 Pfam Leucine Rich Repeat 221 241 IPR001611 GO:0005515(InterPro)
Cec05g1201 769 Pfam Leucine Rich Repeat 199 218 IPR001611 GO:0005515(InterPro)
Cec05g1201 769 MobiDBLite consensus disorder prediction 425 449 - -
Cec05g1201 769 SUPERFAMILY L domain-like 26 288 - -
Cec05g1201 769 Gene3D Transferase(Phosphotransferase) domain 1 544 768 - -
Cec05g1201 769 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 26 191 - -
Cec05g1201 769 SUPERFAMILY Protein kinase-like (PK-like) 473 760 IPR011009 -
Cec05g1201 769 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0841 Cec-Chr2:10121719 Cec05g1201 Cec-Chr5:11034017 1.20E-152 dispersed
Cec05g1201 Cec-Chr5:11034017 Cec11g0759 Cec-Chr11:8732896 5.50E-63 dispersed
Cec05g1201 Cec-Chr5:11034017 Cec05g2466 Cec-Chr5:35796823 7.70E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72008 PF00069 Pkinase 8.90E-31 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1201 - - - 0.0