Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1205 ATGGGTAGCATTGAAACAGACAGAACTGTAACAGGATTCGCCGCCAAAGACCCATCTGGGATTCTCTCTCCTTACACTTACACTCTCAGAAACACCGGCCCCCAAGATGTTTTCATCAAAGTCATTTGCTGTGGAATCTGCCACTCTGATCTTCACCAAATCAAGAATGAACTCGGCATGTCCAATTACCCCATGGTTCCTGGACACGAGGTGGTCGGGGAAGTGGTGGAGGTTGGATCCGAAGTGGATCGATTCAGAGTTGGGGAGATGGTCGGAGTTGGGTGTATTCTTGGATCATGTTCGAGTTGTAATCCTTGTAATTCCGATAAGGAGCAGTACTGTAACAAGAGAATCTGGACCTATAACGACGTCTATCACGACGGCCGCCCTACCCAAGGCGGTTTCTCCTCCGCCATGGTTGTCCACCAAAAGTTTGTGGTGAGAATCCCAGATGGGATGTCGCCGGAGCAGGCGGCGCCGCTTCTGTGCGCGGGAGTGACGGTGTATAGCCCGCTAAGTCACTTTGGACTGAAACAGAGTGGGCTAAGAGGCGGAATTTTGGGGCTGGGTGGCGTTGGACATATGGGTGTGAAAGTGGCAAAAGCTTTGGGCCACCACGTGACGGTGATAAGCTCGTCGGAGAAGAAGAGGGAGGAGGCTCTGGAACATCTCGGTGCCGACGAGTACTTGGTCAGCTCCGACAACACTCAAATGGAACGAGCCATTGACTCGCTCGATTACATTATCGACACCGTCCCTGTTTTTCATCCGCTCGAGCCGTATCTCTCACTGCTAAAACTCGACGGCAAATTGATTTTGATGGGTGTCATTAATACCCCATTGCAATTCGTTTCCCCTCTCCTTATGCTCGGGAGGAAGACGATTACAGGGAGCTTCATCGGAAGCATGACAGAGACACAAGAAGTATTGGATTTTTTTAAAGAGAAGGAGCTGAGCTCCATGATTGAAGTGATAAAGCTTGATTACATAAACAAGGCTTTCGAGAGGTTGGAGAAGAACGATGTTAGATACAGGTTCGTCGTCGACATTGCCGGAAGTAAGCTGCCTCAGTGA 1074 49.91 MGSIETDRTVTGFAAKDPSGILSPYTYTLRNTGPQDVFIKVICCGICHSDLHQIKNELGMSNYPMVPGHEVVGEVVEVGSEVDRFRVGEMVGVGCILGSCSSCNPCNSDKEQYCNKRIWTYNDVYHDGRPTQGGFSSAMVVHQKFVVRIPDGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKREEALEHLGADEYLVSSDNTQMERAIDSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVSPLLMLGRKTITGSFIGSMTETQEVLDFFKEKELSSMIEVIKLDYINKAFERLEKNDVRYRFVVDIAGSKLPQ 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11082250 11083717 - CePI673135_05g012050.1 Cec05g1205 203008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1205 357 SUPERFAMILY GroES-like 17 181 IPR011032 -
Cec05g1205 357 Gene3D - 164 320 - -
Cec05g1205 357 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Cec05g1205 357 FunFam probable cinnamyl alcohol dehydrogenase 13 170 - -
Cec05g1205 357 PANTHER ALDEHYDE REDUCTASE 9 351 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Cec05g1205 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491(InterPro)
Cec05g1205 357 CDD CAD1 11 349 IPR047109 GO:0016616(InterPro)
Cec05g1205 357 Pfam Alcohol dehydrogenase GroES-like domain 33 151 IPR013154 -
Cec05g1205 357 Gene3D - 13 350 - -
Cec05g1205 357 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Cec05g1205 357 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Cec05g1205 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cec05g1205 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0125 Cec-Chr1:1133094 Cec05g1205 Cec-Chr5:11082250 8.10E-86 transposed
Cec04g1521 Cec-Chr4:34726967 Cec05g1205 Cec-Chr5:11082250 7.60E-108 transposed
Cec05g1719 Cec-Chr5:28724398 Cec05g1205 Cec-Chr5:11082250 3.80E-99 transposed
Cec05g2760 Cec-Chr5:38059940 Cec05g1205 Cec-Chr5:11082250 3.60E-07 transposed
Cec09g2006 Cec-Chr9:37085695 Cec05g1205 Cec-Chr5:11082250 5.00E-10 transposed
Cec02g0675 Cec-Chr2:6962907 Cec05g1205 Cec-Chr5:11082250 2.30E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1205 K00083 - csv:101222395 641.343