Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g1231 | ATGCCCTTAGAAGGTATTTTTATTGAACCTTCTTCAACCTCACTTCCTGATCTCTCTCTTCAAATCAGCCCTCCAAATGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTATTCTTCAATTAGAACCCTCAACCATGGATTTTCAGAAAAAAGTTTTGATCTTTTGATTCAAAGAAACTCCCAATTCCAAAATAATATTTCAAATGACCCTCGAACTCAAATTGAGCTGTCTCTAGGAACCACCAACAACAACAATTCCTTCAGTGGAGCAACACTGCATCCACCCCCACCGCTCCCGCATCTCCGGGGGCTTTCGACGTTCGATGTATCATCAGACGGTTTACAACCGATCAAAGGGATTCCGGTGTATCACAACCGTCCATTTCCATTTTTGGGTGTGGATCAAAAAGATCACCATTATTTTCACCAATTTCCATCAGCTTGCTTCTTCCCAAATTACTCGAACACGAACACAAACGGAAGCAGCGGCGGAGGAGGAGTGGTTGAAATGGGTTATCATCATCATCATCATCGAGGCAGCGGAGTTGGAGGAAATAATAATAATAATAATAATAATAATAATAATTGTTCAGCGAGGTTCAACAATGGGGTTGTTTCAGTAGAAGGAATTAAATGTTTGAATAATAATGTTAATAGTAATAATAGTAATGCAGCTTCTTCTTCTGATGTTTGTTCTCATGGGATGATGATGATGAGATCCAGATTCTTGCAGAAGCTTCCTGCAAAACGAAGCATGAGAGCTCCTAGAATGAGATGGACTACCTCCTTACATGCTCGCTTCGTTCATGCTGTCGAACATCTCGGCGGCCATGAAAGAGCAACACCAAAGTCAGTTCTTGAGCTTATGGATGTTAAGGATCTAACATTAGCTCATGTCAAAAGCCATTTACAGATGTATCGAACTGTTAAGACCACTGACAAACCTGCAGCTTCCTCAGGCCAATCGGATGGTTCGGGAGAGGATGATGCATCTCCTACAATGGACACAACCAGAGGGGATCATGGTGCCAAGCAATTTTCCGATCAAAGAGCTCCGCCCGACCGGTCCGGCCAGTCGCTGCCAGAGTTGGAATTTGGCTCCTCCACACTTTGGTCTAATTCTTCAAGAGATGTTTGGCCACAAAGAAACTCTAATGAAATGGATGTCATAACACCAACTTTCATGTCTACACAACAAAAATCCATGCACCAAATTCAGGAATGTGATTCAGGTGTAATGAAGAGATACAATTCAGAATTCAAGAAACCAAGCTTGGAGTTCAGATTAGGCAGAGCAGAGTGGGATGTGAAACAAGACTAA | 1350 | 41.85 | MPLEGIFIEPSSTSLPDLSLQISPPNVSSSSSSSSSSSSSSSSSSSYSSIRTLNHGFSEKSFDLLIQRNSQFQNNISNDPRTQIELSLGTTNNNNSFSGATLHPPPPLPHLRGLSTFDVSSDGLQPIKGIPVYHNRPFPFLGVDQKDHHYFHQFPSACFFPNYSNTNTNGSSGGGGVVEMGYHHHHHRGSGVGGNNNNNNNNNNNCSARFNNGVVSVEGIKCLNNNVNSNNSNAASSSDVCSHGMMMMRSRFLQKLPAKRSMRAPRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDASPTMDTTRGDHGAKQFSDQRAPPDRSGQSLPELEFGSSTLWSNSSRDVWPQRNSNEMDVITPTFMSTQQKSMHQIQECDSGVMKRYNSEFKKPSLEFRLGRAEWDVKQD | 449 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 11400758 | 11407094 | - | CePI673135_05g012310.1 | Cec05g1231 | 203034 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g1231 | 449 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
Cec05g1231 | 449 | MobiDBLite | consensus disorder prediction | 319 | 392 | - | - | |
Cec05g1231 | 449 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 10 | 447 | IPR044847 | GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro) | |
Cec05g1231 | 449 | SUPERFAMILY | Homeodomain-like | 262 | 318 | IPR009057 | - | |
Cec05g1231 | 449 | MobiDBLite | consensus disorder prediction | 371 | 392 | - | - | |
Cec05g1231 | 449 | Pfam | Myb-like DNA-binding domain | 266 | 317 | IPR001005 | - | |
Cec05g1231 | 449 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 265 | 318 | IPR006447 | GO:0003677(InterPro) | |
Cec05g1231 | 449 | FunFam | Myb family transcription factor | 263 | 321 | - | - | |
Cec05g1231 | 449 | Gene3D | - | 264 | 321 | - | - | |
Cec05g1231 | 449 | MobiDBLite | consensus disorder prediction | 12 | 47 | - | - | |
Cec05g1231 | 449 | MobiDBLite | consensus disorder prediction | 319 | 342 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0881 | Cec-Chr1:10215486 | Cec05g1231 | Cec-Chr5:11400758 | 4.80E-33 | dispersed | |
Cec01g1582 | Cec-Chr1:30438323 | Cec05g1231 | Cec-Chr5:11400758 | 1.20E-33 | dispersed | |
Cec05g1231 | Cec-Chr5:11400758 | Cec10g0139 | Cec-Chr10:1332610 | 5.20E-37 | dispersed | |
Cec05g1231 | Cec-Chr5:11400758 | Cec09g1158 | Cec-Chr9:11511445 | 3.30E-44 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29577 | PF00249 | Myb_DNA-binding | 2.10E-05 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g1231 | - | - | - | 0.0 |