Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1231 ATGCCCTTAGAAGGTATTTTTATTGAACCTTCTTCAACCTCACTTCCTGATCTCTCTCTTCAAATCAGCCCTCCAAATGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTTATTCTTCAATTAGAACCCTCAACCATGGATTTTCAGAAAAAAGTTTTGATCTTTTGATTCAAAGAAACTCCCAATTCCAAAATAATATTTCAAATGACCCTCGAACTCAAATTGAGCTGTCTCTAGGAACCACCAACAACAACAATTCCTTCAGTGGAGCAACACTGCATCCACCCCCACCGCTCCCGCATCTCCGGGGGCTTTCGACGTTCGATGTATCATCAGACGGTTTACAACCGATCAAAGGGATTCCGGTGTATCACAACCGTCCATTTCCATTTTTGGGTGTGGATCAAAAAGATCACCATTATTTTCACCAATTTCCATCAGCTTGCTTCTTCCCAAATTACTCGAACACGAACACAAACGGAAGCAGCGGCGGAGGAGGAGTGGTTGAAATGGGTTATCATCATCATCATCATCGAGGCAGCGGAGTTGGAGGAAATAATAATAATAATAATAATAATAATAATAATTGTTCAGCGAGGTTCAACAATGGGGTTGTTTCAGTAGAAGGAATTAAATGTTTGAATAATAATGTTAATAGTAATAATAGTAATGCAGCTTCTTCTTCTGATGTTTGTTCTCATGGGATGATGATGATGAGATCCAGATTCTTGCAGAAGCTTCCTGCAAAACGAAGCATGAGAGCTCCTAGAATGAGATGGACTACCTCCTTACATGCTCGCTTCGTTCATGCTGTCGAACATCTCGGCGGCCATGAAAGAGCAACACCAAAGTCAGTTCTTGAGCTTATGGATGTTAAGGATCTAACATTAGCTCATGTCAAAAGCCATTTACAGATGTATCGAACTGTTAAGACCACTGACAAACCTGCAGCTTCCTCAGGCCAATCGGATGGTTCGGGAGAGGATGATGCATCTCCTACAATGGACACAACCAGAGGGGATCATGGTGCCAAGCAATTTTCCGATCAAAGAGCTCCGCCCGACCGGTCCGGCCAGTCGCTGCCAGAGTTGGAATTTGGCTCCTCCACACTTTGGTCTAATTCTTCAAGAGATGTTTGGCCACAAAGAAACTCTAATGAAATGGATGTCATAACACCAACTTTCATGTCTACACAACAAAAATCCATGCACCAAATTCAGGAATGTGATTCAGGTGTAATGAAGAGATACAATTCAGAATTCAAGAAACCAAGCTTGGAGTTCAGATTAGGCAGAGCAGAGTGGGATGTGAAACAAGACTAA 1350 41.85 MPLEGIFIEPSSTSLPDLSLQISPPNVSSSSSSSSSSSSSSSSSSSYSSIRTLNHGFSEKSFDLLIQRNSQFQNNISNDPRTQIELSLGTTNNNNSFSGATLHPPPPLPHLRGLSTFDVSSDGLQPIKGIPVYHNRPFPFLGVDQKDHHYFHQFPSACFFPNYSNTNTNGSSGGGGVVEMGYHHHHHRGSGVGGNNNNNNNNNNNCSARFNNGVVSVEGIKCLNNNVNSNNSNAASSSDVCSHGMMMMRSRFLQKLPAKRSMRAPRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDASPTMDTTRGDHGAKQFSDQRAPPDRSGQSLPELEFGSSTLWSNSSRDVWPQRNSNEMDVITPTFMSTQQKSMHQIQECDSGVMKRYNSEFKKPSLEFRLGRAEWDVKQD 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11400758 11407094 - CePI673135_05g012310.1 Cec05g1231 203034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1231 449 MobiDBLite consensus disorder prediction 1 47 - -
Cec05g1231 449 MobiDBLite consensus disorder prediction 319 392 - -
Cec05g1231 449 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 10 447 IPR044847 GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro)
Cec05g1231 449 SUPERFAMILY Homeodomain-like 262 318 IPR009057 -
Cec05g1231 449 MobiDBLite consensus disorder prediction 371 392 - -
Cec05g1231 449 Pfam Myb-like DNA-binding domain 266 317 IPR001005 -
Cec05g1231 449 NCBIfam myb-like DNA-binding domain, SHAQKYF class 265 318 IPR006447 GO:0003677(InterPro)
Cec05g1231 449 FunFam Myb family transcription factor 263 321 - -
Cec05g1231 449 Gene3D - 264 321 - -
Cec05g1231 449 MobiDBLite consensus disorder prediction 12 47 - -
Cec05g1231 449 MobiDBLite consensus disorder prediction 319 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0881 Cec-Chr1:10215486 Cec05g1231 Cec-Chr5:11400758 4.80E-33 dispersed
Cec01g1582 Cec-Chr1:30438323 Cec05g1231 Cec-Chr5:11400758 1.20E-33 dispersed
Cec05g1231 Cec-Chr5:11400758 Cec10g0139 Cec-Chr10:1332610 5.20E-37 dispersed
Cec05g1231 Cec-Chr5:11400758 Cec09g1158 Cec-Chr9:11511445 3.30E-44 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29577 PF00249 Myb_DNA-binding 2.10E-05 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1231 - - - 0.0