Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1274 ATGGCGACGAAGATCGACGTAATCGAAGAGGAAGAAATCTCAAAGCTCAAAGAAGGCACTCTCATTTCCGCCGTCGCCCGACTCTGTCCCTCGAATTCGGTCGTCATCATCCAAAAGGTTATCGCGGAGGTGATTGGAACGTACTTCGTGATCTTCACCGGATGTGGAGCGGTGGCGGTGAACAAAATTTATGGATCAGTGACGTTTCCGGGAATCTGTGTGGTTTGGGGATTGATTGTGATGGTAATGGTGTATTCGGTGGGACACATCTCTGGAGCGCACTTCAACCCTGCTGTTACTCTCACCTTTGCCCTTTTTCGTCGCTTCCCCTTCTCTCGGGTACCAATATACATAGGAGCTCAAGTGATGGGGTCCCTTCTGGCAAGCTGCACATTGGACCTAATGCTTGAAGTGACCCCGGAAGCCTTCTTTGGGACGGTGCCCGTTGGATCCAATCTCCAATCTTTGGTTCTTGAAATTATCATCACATTTCTCTTGATGTTTGTCGTCTCTGGGGTCTCCACTGATGACAGAGCCGTAGGAGAATTAGGAGGAATTGTGGTTGGAATGACCATTCTCTTGAATGTTTTCGTCGCCGGGCCGATTTCAGGAGCTTCTATGAATCCAGCTAGGAGCATTGGACCAGCAATAGTGAAACGACAGTTCAAAGGATTATGGGTTTACATAGTAGGACCATTGGTCGGAGCGGTCGCCGGAGGATTTTCCTATAACCTTCTTAGATTCACAAACAAGCCACTGCGAGAGATTGCCAAAAGCAGCTCATTTCTCACCGCCAACTAG 801 48.81 MATKIDVIEEEEISKLKEGTLISAVARLCPSNSVVIIQKVIAEVIGTYFVIFTGCGAVAVNKIYGSVTFPGICVVWGLIVMVMVYSVGHISGAHFNPAVTLTFALFRRFPFSRVPIYIGAQVMGSLLASCTLDLMLEVTPEAFFGTVPVGSNLQSLVLEIIITFLLMFVVSGVSTDDRAVGELGGIVVGMTILLNVFVAGPISGASMNPARSIGPAIVKRQFKGLWVYIVGPLVGAVAGGFSYNLLRFTNKPLREIAKSSSFLTAN 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12427670 12437244 - CePI673135_05g012740.1 Cec05g1274 203077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1274 266 SUPERFAMILY Aquaporin-like 36 256 IPR023271 -
Cec05g1274 266 NCBIfam MIP family channel protein 42 243 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g1274 266 Gene3D Glycerol uptake facilitator protein. 5 258 IPR023271 -
Cec05g1274 266 PANTHER AQUAPORIN NIP2-1 24 251 IPR034294 -
Cec05g1274 266 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g1274 266 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g1274 266 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g1274 266 PRINTS Major intrinsic protein family signature 189 211 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g1274 266 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g1274 266 PRINTS Major intrinsic protein family signature 226 246 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g1274 266 Pfam Major intrinsic protein 33 243 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec05g1274 266 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Cec05g1274 266 CDD MIP 38 246 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2107 Cec-Chr4:39000645 Cec05g1274 Cec-Chr5:12427670 2.30E-80 dispersed
Cec05g0641 Cec-Chr5:5187449 Cec05g1274 Cec-Chr5:12427670 4.00E-12 dispersed
Cec05g1274 Cec-Chr5:12427670 Cec10g1517 Cec-Chr10:29610215 1.20E-54 dispersed
Cec05g1274 Cec-Chr5:12427670 Cec02g1263 Cec-Chr2:29263697 1.30E-16 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1274 K09874 - csv:101215315 462.225