Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1290 ATGGAGAATTTAATGGGTTTGCTAAGAATCCATGTGTTTAGAGGTGTTAATCTTGCTGTAAGAGATGTTGTTAGCAGTGATCCTTATGTTATTTTCAAGATGGGCAAACAGAAATTAAAGACTCGAGTAGTGAAGCAAAACATCAATCCAGAATGGAATGAAGATCTAACTCTATCAATCCAAGATCCAAATCTCCCAGTGAATGTGCTCGTATACGACAGAGACTTATTCTCACTCGACGACAAGATGGGGGATGCAGAGTTCGACGTTCGACCGTTCATGGAAGCGGTAAAGATGAGATTGAACAATCTCCCAAGTGGCACCATCATAACAAAGATTCAACCAAGTAGGGAAAATTGTTTGTCTGAAGAAAGTTGCATAGTTTGGGTAAATGGACAAGTTATTCAGAAAATGTTTCTAAGGTTAAGAAATGTGGAGTCTGGTGAAATTGAGCTGCAGTTGCAATGGATTGATATTCCTGGCTCTAGGGGATTGTAG 498 39.56 MENLMGLLRIHVFRGVNLAVRDVVSSDPYVIFKMGKQKLKTRVVKQNINPEWNEDLTLSIQDPNLPVNVLVYDRDLFSLDDKMGDAEFDVRPFMEAVKMRLNNLPSGTIITKIQPSRENCLSEESCIVWVNGQVIQKMFLRLRNVESGEIELQLQWIDIPGSRGL 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 12775535 12777194 - CePI673135_05g012900.1 Cec05g1290 203093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1290 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Cec05g1290 165 SMART C2_3c 7 102 IPR000008 -
Cec05g1290 165 Pfam C2 domain 6 93 IPR000008 -
Cec05g1290 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Cec05g1290 165 Gene3D C2 domain 4 160 IPR035892 -
Cec05g1290 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Cec05g1290 165 CDD C2_ArfGAP 6 148 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1602 Cec-Chr1:30671446 Cec05g1290 Cec-Chr5:12775535 2.10E-64 dispersed
Cec04g1832 Cec-Chr4:37028169 Cec05g1290 Cec-Chr5:12775535 3.20E-32 dispersed
Cec05g1290 Cec-Chr5:12775535 Cec07g0675 Cec-Chr7:11152760 7.70E-47 dispersed
Cec05g1290 Cec-Chr5:12775535 Cec06g1632 Cec-Chr6:29916336 2.30E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1290 - - - 0.0