Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1305 ATGGAGTTCCCCCAAGGAATTTTAGCGGCGGCGGTTCTGAGTTTCGCTTTTCTGGGTTTTGTCCGGATGGATCTGGCCTCTGACAGGGCCGCGCTGGTGGGGTTTCGGGCGGCGATGGGTGGCCGGCCCCGATTAGAGTGGAATCTCTCCGATGTATCACCCTGTGCTTGGGCTGGTGTTAACTGTGACAGGAGTGGGGTTTTTGAGCTCCGGCTTCCGGCAATGGGGCTTTCCGGTGAGCTTCCCTTGGGGCTTGGGAATTTGACGCAGTTACAAACTCTTTCTCTGCGGTTTAATGCTCTGTCTGGACGGATTCCGGCGGATTTTGCGAATCTTCGTGGGCTGAGGAATCTTTACTTGCAGGGGAACTTGTTTTCCGGCGAGATTCCGGCGTTTCTGTTCGGTTTGCAGAATCTTGTTCGGTTGAACATGGCGGACAACAATTTTTCAGGTGAGATTTCATCTGGGTTCAACAATCTCTCCCGTTTGGCTACTCTGTATTTACAGAACAATCAGTTTACCGGAGTAGTTCCTGACTTAAATCTCACTCTTGAACAATTTAATGTCTCCTTTAATCGATTGAATGGTTCAATTCCCTCGAGGCTCTCTAGTTTTCCGGCGAGTTGTTTTGAGGGGAATTTGCTCTGTGGGGCGCCATTGTTACTCTGTAACTCGACAGCCACCGAGCCTGGTCGAAAGTCGAAGCTCTCAGGCGGGGCGATTGCTGGAATTGTGATCGGTGGTTTGTTTGTTTTGGTGTTGATTTTGGTTGTTTTGATTCTTGTGTGTCAAAGAAAGAGCGAAGAGAAATCGGAGTCGAAAGAGGGGGTTCGGTCGGCTGGTGAGGTTGGGGTGCCGAGAGAGAAGATGACGACAGTGGAAGGGAGTAGCGAAAGGGTAAGCATAGATCATTTGACTATAGCGAAATCATCAGCGAAGGGCGGGGAAAAGGATAAGAAATTGGTGTTCTTTGGTAATGTGGGAAATGTGTTTGATTTGGAGGACTTGTTGAGGGCGTCGGCGGAGGTCCTCGGGAAGGGGGCGTTCGGGACAGCATATAAGGCGACACTGGAGACGGGGATGGTGGTGGCTGTGAAGCGGTTGAAGGAGATGACTGCGGCGGAGAAGGAGTTCAGGGAGAAAATGGAGGAGGTGGGGAGGATGAAGCATGAAAATTTAGTTCCTCTTAGAGCTTATTATTACAGCAGAGAGGAAAAGCTTTTGGTTTATGATTACATGCCAATGGGAAGCTTGTCTGCACTTTTACATGGTAGTAGAGAATCAGGGAGGACTCCGTTGAATTGGGAAGCAAGGTGTGGCATAGCGCTGGGAGTTAGCCGTGGGATTGATTACCTTCATTCTCAAGGCCCTACCGTCTCTCATGGCAACATCAAATCCTCTAATGTTCTCCTCACCAGATCATACGAAGCATGTGTATCCGACTTTGGCCTTGCACAACTAGCCATGTCCCCATCAGCTCCAAGTCGTGTTGCTGGGTACCGAGCCCCAGAGATCACGGATTCTCGAAAGGTATCACAAAAAGCAGACGTTTATAGCTTCGGAGTGTTGTTATTGGAGATGCTAACAGGAAAATCTCCTACACATTCTATCTTCAATGATGAAGCTGTGGACCTTCCAAGATGGGTTCAATCTGTGGTTCAAGAGGAATGGACAGCTGAAGTGTTTGATGAACAACTTCTTAGGTACCAAAATGTTGAGGAGGAGATGGTTCAACTCTTAGAACTCGCTCTGCAATGTACCGTCCCGTATCCTGATAATCGTCCTGGAACGGACGAGATTGTTCGACGTATCGAAGATCTTTGTCGATCAACCTCCCAAAAACAGAGTGAGGCAATTGACAATGATGGAAATAATGGTATTTCCACACAGTTTCATTCACTAAACTCACCTCATCCACCATCTGCAGAGTAG 1932 48.6 MEFPQGILAAAVLSFAFLGFVRMDLASDRAALVGFRAAMGGRPRLEWNLSDVSPCAWAGVNCDRSGVFELRLPAMGLSGELPLGLGNLTQLQTLSLRFNALSGRIPADFANLRGLRNLYLQGNLFSGEIPAFLFGLQNLVRLNMADNNFSGEISSGFNNLSRLATLYLQNNQFTGVVPDLNLTLEQFNVSFNRLNGSIPSRLSSFPASCFEGNLLCGAPLLLCNSTATEPGRKSKLSGGAIAGIVIGGLFVLVLILVVLILVCQRKSEEKSESKEGVRSAGEVGVPREKMTTVEGSSERVSIDHLTIAKSSAKGGEKDKKLVFFGNVGNVFDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEVGRMKHENLVPLRAYYYSREEKLLVYDYMPMGSLSALLHGSRESGRTPLNWEARCGIALGVSRGIDYLHSQGPTVSHGNIKSSNVLLTRSYEACVSDFGLAQLAMSPSAPSRVAGYRAPEITDSRKVSQKADVYSFGVLLLEMLTGKSPTHSIFNDEAVDLPRWVQSVVQEEWTAEVFDEQLLRYQNVEEEMVQLLELALQCTVPYPDNRPGTDEIVRRIEDLCRSTSQKQSEAIDNDGNNGISTQFHSLNSPHPPSAE 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 13138731 13140955 + CePI673135_05g013050.1 Cec05g1305 203108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1305 643 Gene3D Phosphorylase Kinase; domain 1 306 412 - -
Cec05g1305 643 MobiDBLite consensus disorder prediction 612 643 - -
Cec05g1305 643 SUPERFAMILY L domain-like 46 205 - -
Cec05g1305 643 Pfam Protein kinase domain 342 602 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1305 643 PANTHER OS05G0588300 PROTEIN 11 612 IPR050994 -
Cec05g1305 643 FunFam Probable inactive receptor kinase RLK902 25 181 - -
Cec05g1305 643 SUPERFAMILY Protein kinase-like (PK-like) 342 603 IPR011009 -
Cec05g1305 643 Gene3D Transferase(Phosphotransferase) domain 1 413 631 - -
Cec05g1305 643 SMART LRR_typ_2 112 136 IPR003591 -
Cec05g1305 643 SMART LRR_typ_2 88 111 IPR003591 -
Cec05g1305 643 SMART LRR_typ_2 160 183 IPR003591 -
Cec05g1305 643 Coils Coil 371 391 - -
Cec05g1305 643 CDD STKc_IRAK 344 607 - -
Cec05g1305 643 Gene3D Ribonuclease Inhibitor 25 205 IPR032675 -
Cec05g1305 643 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 413 618 - -
Cec05g1305 643 ProSiteProfiles Protein kinase domain profile. 338 607 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1305 643 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524(InterPro)
Cec05g1305 643 Pfam Leucine Rich Repeat 138 160 IPR001611 GO:0005515(InterPro)
Cec05g1305 643 Pfam Leucine Rich Repeat 115 136 IPR001611 GO:0005515(InterPro)
Cec05g1305 643 Pfam Leucine Rich Repeat 90 112 IPR001611 GO:0005515(InterPro)
Cec05g1305 643 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Cec05g1305 643 FunFam pollen receptor-like kinase 1 307 412 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0876 Cec-Chr1:10108936 Cec05g1305 Cec-Chr5:13138731 2.00E-135 dispersed
Cec05g1305 Cec-Chr5:13138731 Cec11g0278 Cec-Chr11:3025179 8.00E-124 dispersed
Cec05g1305 Cec-Chr5:13138731 Cec01g1590 Cec-Chr1:30557270 5.50E-165 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72009 PF00069 Pkinase 1.90E-38 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1305 - - - 0.0