Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1315 ATGGCGACGCTAATGTCGGGCTCCAGAATTCAACCAGCAGCTTCTGTTCTTTCCTCCTCCATGAAGCGCCATGTGGGTTTTAATTCCCACCTTCGTTCCAATTGCTCGCTTTCTCCTTTTCACCATTCTTCATTCTCCTTCAGGCGCTCTGGACCTAGACGATCTCTCTCTGTTTCCATGTCCGTTACCCCTCTAGAAGCCTGCGTCAAAGCTTCCATTACCGTACCCAACAAGCTCGGCGACTGCCCTTTTTGTCAAAGGGTATTACTGACTTTGGAGGAAAAGCATGTACCCTATGACTTAAAGTTGGTAGACCTGTCAAACAAGCCAGAATGGTTCTTAAAAATAAATTCAGACGGCAAAGTTCCCGTTGTTAAATTTGATGAGCAGTGGGTTGCAGATTCAGATATTATAACACAAACACTGGAAGAGAAGTACCCAAATCCACCTTTAGCTACCCCTCCTGACAAATCTTCAGTAGGATCAAAGATTTTCTCCACATTTATTGCTTTTCTAAAGAGCAAGGATCCTAACGATGGAACAGAACAAGCATTGATTAGCGAGCTAAGTTCTTTCAATGATCACATCAAAGAGAATGGCTCTTTTATCAACGGGAAAGAGATTTCTGCTGCAGACCTGTCACTTGGTCCAAAGTTGTACCATCTAGAAATTGCATTGGGTCACTACAAGAACTGGTCTGTTCCAGACAGTCTTCCTTACGTTAAATCTTACATGAAGAGCATATTTTCAAGAGAATCATTTGCAAACACTCGTGCCCTGCCTGAGGATGTTATTGCTGGTTGGCGTCCGAAGGTATATATCCTCGGATTGCGTGCACATAATCTTCCCCATCTTCTCTTCTTCCTGTTGTTCGTGCTCCTTGGTTTGACCGTCCACCACCGCGCCAACCGCCGTCCTCCTCTTGCGTCGTCGTTCGTCGATAATCCGAGTCGTCTAAATCACACCATCATTCATTGTCAATTTGAGTTGCACACCGTCCTCCCAATAGTACTAAACAACTTCCAACTTAAAACCTCCCATTCGTCCTAA 1050 44.67 MATLMSGSRIQPAASVLSSSMKRHVGFNSHLRSNCSLSPFHHSSFSFRRSGPRRSLSVSMSVTPLEACVKASITVPNKLGDCPFCQRVLLTLEEKHVPYDLKLVDLSNKPEWFLKINSDGKVPVVKFDEQWVADSDIITQTLEEKYPNPPLATPPDKSSVGSKIFSTFIAFLKSKDPNDGTEQALISELSSFNDHIKENGSFINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYMKSIFSRESFANTRALPEDVIAGWRPKVYILGLRAHNLPHLLFFLLFVLLGLTVHHRANRRPPLASSFVDNPSRLNHTIIHCQFELHTVLPIVLNNFQLKTSHSS 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 13381844 13388441 - CePI673135_05g013150.1 Cec05g1315 203118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1315 349 SFLD Main (cytGST) 81 248 - -
Cec05g1315 349 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 128 274 IPR010987 -
Cec05g1315 349 Gene3D - 152 274 - -
Cec05g1315 349 SUPERFAMILY Thioredoxin-like 81 149 IPR036249 -
Cec05g1315 349 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 65 271 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Cec05g1315 349 SFLD Glutathione Transferase (cytosolic) 81 248 IPR040079 -
Cec05g1315 349 Pfam Glutathione S-transferase, N-terminal domain 82 144 IPR004045 -
Cec05g1315 349 Gene3D Glutaredoxin 63 151 - -
Cec05g1315 349 FunFam Glutathione S-transferase DHAR3 chloroplastic 63 151 - -
Cec05g1315 349 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 72 150 IPR004045 -
Cec05g1315 349 CDD GST_N_family 82 143 - -
Cec05g1315 349 SUPERFAMILY GST C-terminal domain-like 145 271 IPR036282 -
Cec05g1315 349 FunFam Glutathione S-transferase DHAR3, chloroplastic 152 274 - -
Cec05g1315 349 CDD GST_C_DHAR 151 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0902 Cec-Chr2:11603452 Cec05g1315 Cec-Chr5:13381844 1.40E-10 dispersed
Cec05g1315 Cec-Chr5:13381844 Cec11g0974 Cec-Chr11:16129638 1.30E-184 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1315 K21888 - csv:101203335 484.182