Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1336 ATTTTTATTTCATCACTTGCAAAGATTGCATATGATACAGTCTCATGCTACTGGCTGACCCCAAGAAGAATCAGGAAGAAGATGGAGAAACAAGGCGTTCGTGGCCCCGACCCACGGCCGCTGCTCGGAAACATCCTCGACGTAGCGGCACTTGTGGCAAAATCCACTGCCAACGACATGAGCTCGATTGATCACAGCATCGTCGACCGCCTATTGCCTCATTACACCACCTGGACAAAGCAATATGGAAAGAGATTTATATATTGGAACGGCATGGAGCCGAGGCTATGTTTGGCGGAGACGGAATTGATAAAAGAAGTATTGAGTAAAAACAGCAATGTGTGTGGGAAATCATGGCTGCAAAGACAGGGAACCAAACATTTCATTGGGAAAGGATTGTTGATGGCAAATGGGGAAGATTGGTATCATCAACGTCACATCGTTGCACCTGCGTTTATGGGGGATAAGCTCAAGAGCTATGCGGGGATGATGGTGGAGTGCACTAAGAAAATGATCCAATCACTAGAGGCCGAGTTTGACTCGGGCCGGACCGAGTTTGAGATCGCCGATTACATGAAACAACTCACCGCCGACATCATTTGTCGGACCGAGTTCGATGCCAACTCCGACAAGGGCAAAGAAATCTTCCATTTGCTCACTCTTCTCCAGTGCCTCTGCGCCCAAGCCAGCCGCCACCTCTGCCTCCCCGGTAGCCGGTTTTTTCCAAGTAATTACAACAGAGAAATAAAGTCACTGAAAATGGAGGTAGAGAGGTTGTTAATGGAGATTATTCAGAGCAGAAAAGATGGTGTGGAGATTGGAAGAAGTACTTGCTATGGAAGTGATTTGTTGGGAATGCTATTGAATGAAATGCAAAGGAAAAGTGAGGATAATGGTTTCAGCTTGAACTTGCAGCTCATAATGGATGAATGCAAAACTTTCTTCTTTGCTGGTCATGAAACCACTGCCCTTTTGCTCACTTGGACCATCATGTTGCTTGCCACTAACCCTAATTGGCAACAAAAAGTTCGTCATGAGGTCAATCAAGTTTGCAACAATGGTGGAATTCCCTCTGTTGAACATCTCTCTAAGTTCACTTTGCTAAACATGGTGATAAATGAATCGCTAAGGCTTTACCCACCGGCGACGGTGCTTCCAAGAATGGCGTTCGAGGACATAAAAGTAGGAGATTTAGAGATCCCAAAAGGACTATCGATATGGATTCCCGTGCTTGCAATTCATCATAGTGAAGAGTTATGGGGAAAAGATGCAAACGAATTCAAACCAGAAAGATTTGCCTCAAAACCATTTAGTGGTGGACGTTTCATTCCATTTGCATCTGGACCAAGAAACTGCATTGGCCAAGGATTTGCATTGATGGAAGCTAAGATCATTTTGGCTATGTTTCTCTCAAAGTTTAGCTTCACTATTTCAGATTCTTATCGCCATGCTCCTGTTAGTGTTCTCACCATACAGCCTAAGTATGGAGTTCAAGTTTATTTGACTCCACTCAATTCTAATTAG 1524 44.42 IFISSLAKIAYDTVSCYWLTPRRIRKKMEKQGVRGPDPRPLLGNILDVAALVAKSTANDMSSIDHSIVDRLLPHYTTWTKQYGKRFIYWNGMEPRLCLAETELIKEVLSKNSNVCGKSWLQRQGTKHFIGKGLLMANGEDWYHQRHIVAPAFMGDKLKSYAGMMVECTKKMIQSLEAEFDSGRTEFEIADYMKQLTADIICRTEFDANSDKGKEIFHLLTLLQCLCAQASRHLCLPGSRFFPSNYNREIKSLKMEVERLLMEIIQSRKDGVEIGRSTCYGSDLLGMLLNEMQRKSEDNGFSLNLQLIMDECKTFFFAGHETTALLLTWTIMLLATNPNWQQKVRHEVNQVCNNGGIPSVEHLSKFTLLNMVINESLRLYPPATVLPRMAFEDIKVGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFKPERFASKPFSGGRFIPFASGPRNCIGQGFALMEAKIILAMFLSKFSFTISDSYRHAPVSVLTIQPKYGVQVYLTPLNSN 507
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 13963554 13967465 + CePI673135_05g013360.1 Cec05g1336 203139
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1336 507 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 497 IPR050665 GO:0004497(PANTHER)
Cec05g1336 507 PRINTS E-class P450 group I signature 79 98 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 Coils Coil 249 269 - -
Cec05g1336 507 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 Pfam Cytochrome P450 75 478 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 Gene3D Cytochrome P450 17 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g1336 507 SUPERFAMILY Cytochrome P450 36 503 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0978 Cec-Chr5:8516002 Cec05g1336 Cec-Chr5:13963554 6.60E-89 dispersed
Cec05g1336 Cec-Chr5:13963554 Cec05g2116 Cec-Chr5:32908232 1.90E-96 dispersed
Cec05g1336 Cec-Chr5:13963554 Cec11g0572 Cec-Chr11:6304307 8.20E-233 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1336 K10717 - csv:101213604 969.533