Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1406 ATGGAGCAAGGATCTGGGATTTCCACTCCTTCCAATCCTTCTCAGCTCTCGCGGGCATGTCTTACAAGGAATATAATACTTGCATACCAAAGTTTTGGAGTAGTGTATGGAGATTTGAGCACTTCACCCCTCTACGTTTACTCAAGTACATTTGCGGGGAAGTTGCAGAAACATCGAACTGAGGAAGTAGTATTTGGTGCATTCTCCTTGATCTTCTGGACTTTTACTCTGATACCATTACTAAAGTATGTTTTCATTGTATTGAGCGCAGATGACAATGGCGAAGGAGGAACCTTTGCTCTTTACTCCCTGCTCTGCCGACATGCTAAGTTGAGTTTACTTCCCAACCAACAAGCAGCTGATGAGGAGCTCTCAGCATACAGATATGGTCCATCTTCTCATGCAGTAGCCCCTTGTCAACTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGACGATCTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGAGTGCTAACTCCTGCAATTTCAGTTCTATCCTCAGTTTCAGGTTTACAAGTTACTGAAGCAAAATTGACCAACGGGACACTCCTTTTGATTGCTTGTGCCATATTGGTTGGTCTGTTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCATTTATGTTTGCTCCAATAGTTATCATCTGGTTGTTGTCAATTTTCTCCATTGGTCTGTACAACATAATACATTGGAACCCAAGTATTATTCGTGCAATTTCCCCTCATTATGTTATCAAGTTCTTACAAATCACTGGTAAAGATGGTTGGCTTTCTCTCGGAGGGGTTCTTCTGGCCATAACTGGTACTGAGGCGATGTTTGCAGATCTTGGTCATTTCACGGCTTTGTCGATAAGGATTGCATTTGCGTTTGTTATCTACCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCCTTTCTGTCTAAGAACCTTGATTTGTTTCCAAACAGTTTTTATGACTCGATACCTGATCCTGTATTTTGGCCTGTTTTTGTTATTGCCACCCTTGCAGCTATTGTGGGGAGCCAGGCTGTCATTACTGCTACTTTCTCTATTGTCAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTAAAAGTTGTCCACACCTCTAAACACATATATGGGCAGATCTACATCCCAGAAATAAACTGGATATTAATGATCCTCACTCTTTCCATTACAATAGGGTTTCAAGATACGACACTGATCGGAAATGCTTATGGACTCGCCTGCATGACAGTTATGTTCACAACAACATTTCTTATGGCACTTGTCATAGTATTCGTTTGGCAAAAAAGTATCCTGCTAGCCGCACCTTTTCTCATCTTCTTCTGGTCTGTCGAGGGTGCCTACTTATCAGCAGCAATCATAAAAGTGCCTCAAGGAGGGTGGGTCCCACTTGTGCTATCAGCCTTTTTTATGATAGTTATGTTTGTCTGGCACTATGGCACTCGCAAGAAGTACAACTTTGATCTACACAATAAAGTTTCACTGAAGTGGTTGCTTGGACTAGGCCCTAGCCTTGGTATAGTTCGTGTCCCTGGGATTGGCCTCATATACTCGGAATTGGCGACAGGAGTACCCGCAATATTTTCTCACTTTGTGACAAATCTCCCTGCATTTCACAAGGTTTTAGTGTTTGTTTGTGTAAAGTCTGTTCCAGTTCCATATGTCTCGCCCGAAGAACGTTTTCTGATTGGGAGAGTCTGTCCTAGACCATATCGCATGTATCGGTGCATAGTGAGATATGGCTACAAGGACATTCAGAAGGATGATGGGGACTTTGAGAACCAACTGATACTAAACATTGCAGAATTTATTCAAATGGAGGCAGAGGAACCACAATTCTCAAGCTCTGAAAGTTCTTCAGTTGATGGGAGGATGGCAGTAATAAGTACTCGGAGTATACAATCAAGCTTGAGTTTAATAGTGTCAGGGCATGAAGAAATCGGTACCAGCAACTCCATCTATAGCAGCAAATCTGCCACACTCCAAAGTTTACGATCTGTGTATGAGGATGAGAATCCACAACTAAGAAGGCGCCAAGTGAGGTTTCAGCTATCTCCCAGCCCTTCAATGGACCCTAGAGTTAGGGAAGAATTAATAGACTTGATCCAAGCCAAAGAAGCGGGTGTAGCATATATAATGGGGCACTCATATGTGAAGGCCAGAAGATCTTCGTCGTATTTGAAGAAGCTTGTGATAGATATCGGATACTCGTTCCTCCGAAAGAACTGCAGAGGCCCGTCTGTTGCGCTCAATATCCCTCACATCAGTCTAATCGAATTCAGAGAGAAATCAATGGAAAGAAGCGCGATGGCGGCAATGGCAGTAGTACTGGTATTAGCTTGCGGCGCAACCATGGGAATCGCTCAAAATCAGGACACATCGTGTGTGAATAGGTTAGTTCCATGCTTAAATTACTTAAACGGAACTCGAAATCCGCCGGAGACTTGCTGTAATCCTCTGAGATCGATCATCGATTCCAATCCCGATTGCCTTTGCGGTTTAATTAGCAGTGAAGGAAGCAATCGAGCAGAGGCGGCCGGCATCGATATCAACCAGGCTCAACTCTTGCCCGCTCGATGTGGCCAACATGTCAATCCTCTCTCTTGCCTCACTCCCAATAATGCTGGTAGTTTCTCCCCAAAATCAACCATTTCTGGGTTGCCCTCCATGTCTTCCACTCTACAAGTAATTACACTCGCGATTTCCACAATGGTTATCATGTCTTCAATTCTTCACTTTTAG 2796 43.49 MEQGSGISTPSNPSQLSRACLTRNIILAYQSFGVVYGDLSTSPLYVYSSTFAGKLQKHRTEEVVFGAFSLIFWTFTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYRYGPSSHAVAPCQLKRFLERHKTLRTILLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTEAKLTNGTLLLIACAILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFSIGLYNIIHWNPSIIRAISPHYVIKFLQITGKDGWLSLGGVLLAITGTEAMFADLGHFTALSIRIAFAFVIYPCLVVQYMGQAAFLSKNLDLFPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLSITIGFQDTTLIGNAYGLACMTVMFTTTFLMALVIVFVWQKSILLAAPFLIFFWSVEGAYLSAAIIKVPQGGWVPLVLSAFFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEAEEPQFSSSESSSVDGRMAVISTRSIQSSLSLIVSGHEEIGTSNSIYSSKSATLQSLRSVYEDENPQLRRRQVRFQLSPSPSMDPRVREELIDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEFREKSMERSAMAAMAVVLVLACGATMGIAQNQDTSCVNRLVPCLNYLNGTRNPPETCCNPLRSIIDSNPDCLCGLISSEGSNRAEAAGIDINQAQLLPARCGQHVNPLSCLTPNNAGSFSPKSTISGLPSMSSTLQVITLAISTMVIMSSILHF 931
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15896246 15906656 + CePI673135_05g014060.1 Cec05g1406 203209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1406 931 Gene3D - 811 886 IPR036312 -
Cec05g1406 931 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 22 778 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cec05g1406 931 NCBIfam potassium uptake protein 27 777 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cec05g1406 931 CDD AAI_LTSS 817 879 - -
Cec05g1406 931 SMART aai_6 799 887 IPR016140 -
Cec05g1406 931 Pfam K+ potassium transporter integral membrane domain 27 516 IPR053951 -
Cec05g1406 931 Pfam Probable lipid transfer 794 887 IPR016140 -
Cec05g1406 931 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 812 888 IPR036312 -
Cec05g1406 931 Pfam K+ potassium transporter C-terminal domain 529 778 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0056 Cec-Chr3:567795 Cec05g1406 Cec-Chr5:15896246 2.50E-233 dispersed
Cec03g0408 Cec-Chr3:4490342 Cec05g1406 Cec-Chr5:15896246 4.00E-202 dispersed
Cec03g0410 Cec-Chr3:4499964 Cec05g1406 Cec-Chr5:15896246 5.40E-208 dispersed
Cec05g1406 Cec-Chr5:15896246 Cec10g1456 Cec-Chr10:28900416 5.20E-249 dispersed
Cec05g1406 Cec-Chr5:15896246 Cec09g2001 Cec-Chr9:37017380 4.00E-249 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1406 K03549 - csv:101208973 1492.63