Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1439 ATGGCCATCTCTGAAACTCAGTTCCCTTCTTCTCTCATCCCTAATTTCCTCTACTCCTCTTCTGCCATTCCATTCCACAAGATTCTCCGCTCCAATCTTCCTTCTGAATCGCCATCTCCGAGCCTCGAATCCTCCACTTCGATGAAGGCCTTCGCGGTTCCTTCTCCCACTGAACCGAGCAAGAAATTGGAGATGTATTCGCCGGCTTTCTTCGCCGCCTGTGCCGTCGGTGGAAGCCTCAGCTGCGGTCTCACTCACATGACCGTCACTCCGCTCGATCTCGTCAAGTGTAATATGCAGATTGACCCGGTGAAATACAAGAGCATTTCATCTGGTTTTGGAATTTTGCTAAAGGAGCAAGGAATCAGGGGGCTGTTTAGGGGTTGGGCGCCAACTCTACTAGGTTACAGTGCTCAGGGTGCTTGCAAGTATGGCATCTACGAATTCTTTAAGAAATACTATTCCGATATAGTCGGTCCTGAGTATGCAGCAAAGTACAAGACATTGATCTATCTTGCTGGTTCTGCATCTGCTGAAGTGATTGCAGATGTTGCACTTTGCCCCTTTGAAGCTGTTAAAGTTAGAGTTCAGACACAGCCAGGTTTTGCCAGAGGTTTGTCAGATGGCCTTCCCAAATTTGTTAGATCGGAAGGTGCTCTTGGGTTGTATAAGGGTATTGTTCCTCTGTGGGGACGTCAAATCCCATATACAATGATGAAGTTTGCAACATTTGAGAACCTGGTGGAACTCATATACAAGCATGTCATCCCCAAGCCAAAGAACGAATGCAGCAGCGCCTTGCAGCTCGGCGTCAGTTTTGCTGGTGGATATATTGCCGGTGTTTCTTGTGCTATAGTTTCTCATCCTGCGGATAATCTTGTCTCCTTTCTCAATAATGCTAAAGGGGCTACCGTTGGTGAGGCAGTTCAGAAGCTTGGATTATGGGGTCTCTTCACACGAGGGCTGCCTCTACGCATAGTGATGATTGGAACCCTCACTGGAGCTCAGTGGGTTATCTATGACGCATTCAAAGTTTCTGTGGGATTGCCAACTACCGGTGGGGTTGCCCCTCCCGTTGCTGCATCCCCAGAACATACAACTGCGAGTGCGTAG 1113 48.52 MAISETQFPSSLIPNFLYSSSAIPFHKILRSNLPSESPSPSLESSTSMKAFAVPSPTEPSKKLEMYSPAFFAACAVGGSLSCGLTHMTVTPLDLVKCNMQIDPVKYKSISSGFGILLKEQGIRGLFRGWAPTLLGYSAQGACKYGIYEFFKKYYSDIVGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHVIPKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGEAVQKLGLWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVSVGLPTTGGVAPPVAASPEHTTASA 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 16964836 16970029 + CePI673135_05g014390.1 Cec05g1439 203242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1439 370 Pfam Mitochondrial carrier protein 167 254 IPR018108 -
Cec05g1439 370 Pfam Mitochondrial carrier protein 70 155 IPR018108 -
Cec05g1439 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 153 IPR018108 -
Cec05g1439 370 SUPERFAMILY Mitochondrial carrier 71 342 IPR023395 -
Cec05g1439 370 ProSiteProfiles Solute carrier (Solcar) repeat profile. 166 250 IPR018108 -
Cec05g1439 370 FunFam Phosphate carrier protein, mitochondrial 69 347 - -
Cec05g1439 370 Gene3D Mitochondrial carrier domain 69 347 IPR023395 -
Cec05g1439 370 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 49 356 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0787 Cec-Chr1:8657783 Cec05g1439 Cec-Chr5:16964836 1.80E-165 dispersed
Cec02g0347 Cec-Chr2:3216267 Cec05g1439 Cec-Chr5:16964836 1.90E-83 dispersed
Cec05g1439 Cec-Chr5:16964836 Cec06g2021 Cec-Chr6:33336302 1.30E-150 dispersed
Cec05g1439 Cec-Chr5:16964836 Cec05g2304 Cec-Chr5:34320812 1.90E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1439 K15102 - csv:101203018 660.218