Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1527 ATGGAGAATTATCAGATGTTTTTCCCTTGCTCCAGCGGCGGCGATGGTGGCGGAGGACTGTCGGCGTATCATCATGCCGACATGTCATCTGTTTCCGGGTCTGATATATTTGGGAATTTTCACGGCGGCGATATGGAGGTAAGTGGGGTTTTGGGGATGAAGACAGAGGTGGATGCGGCGGCGGCGGTGGAAGCGGACGGCGGCGGAAAAAAGAAAGGGGAGAAGAAGGTGAGGAAACCAAGATATGCTTTTCAGACAAGAAGCCAAGTTGACATTCTCGACGATGGATATCGTTGGAGAAAATACGGTCAAAAAGCTGTCAAAAACAACAAGTTTCCTAGGAGCTATTATAGATGCACGCATCAAGGATGCGATGTGAAAAAGCAAGTGCAAAGACTAACAAGAGATGAAGGGGTGGTGGTGACAACATATGAAGGAATGCACACACATTCCATTGATAAGCCAACAGACAACTTTGAACAAATCTTGAGTAGAATGCAGATTTATAGTACTCCTTTTTGA 522 46.17 MENYQMFFPCSSGGDGGGGLSAYHHADMSSVSGSDIFGNFHGGDMEVSGVLGMKTEVDAAAAVEADGGGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCDVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYSTPF 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19675822 19677894 - CePI673135_05g015270.1 Cec05g1527 203330

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1527 173 ProSiteProfiles WRKY domain profile. 88 153 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g1527 173 SMART WRKY_cls 93 152 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g1527 173 FunFam WRKY transcription factor 57 79 153 - -
Cec05g1527 173 Pfam WRKY DNA -binding domain 94 150 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g1527 173 Gene3D WRKY domain 77 153 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g1527 173 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 153 IPR044810 GO:0003700(InterPro)
Cec05g1527 173 SUPERFAMILY WRKY DNA-binding domain 85 152 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1527 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1527 Cec-Chr5:19675822 Cec07g1664 Cec-Chr7:32229530 2.10E-47 dispersed
Cec05g1527 Cec-Chr5:19675822 Cec06g0447 Cec-Chr6:5039065 1.50E-29 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g1147 . Blo11g00612 Bda01g01064 . Bpe02g01307 . . . Cmo14g00740 . Cma11g01514 Cma14g00727 Car11g01302 Car14g00663 . Cpe03g00631 . . . . . . . . Cla11g00902 . . . Clacu11g0932 Cmu11g0779 . . . Cone2ag0036 Cone16ag1003 . . Chy06g01543 Cme06g01785 . . Bda07g01384 . . Bpe11g01486 . . . . . . . . . . . Bhi01g02098 . . . Hepe02g1696 . . Cla05g01424 Cam05g1512 Cec05g1527 Cco05g1560 Clacu05g1519 Cmu05g1427 Cre05g1530 . Csa03g02485 . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec02g0284 . 104 352 WRKY Transcription Factor Family AT2G04880 57.9 1.6e-78 290.4
Cec03g0015 . 236 476 WRKY Transcription Factor Family AT5G56270 53.6 2.7e-69 260.4
Cec05g2623 . 18 491 WRKY Transcription Factor Family AT2G03340 51.5 4.4e-117 418.7
Cec11g0476 . 12 503 WRKY Transcription Factor Family AT2G03340 52.3 4.4e-117 418.7
Cec03g0015 . 228 489 WRKY Transcription Factor Family AT2G03340 53.2 1.0e-65 248.1
Cec05g2623 . 108 491 WRKY Transcription Factor Family AT1G13960 56.8 4.2e-98 355.1
Cec11g0476 . 139 503 WRKY Transcription Factor Family AT1G13960 51.3 1.9e-82 303.1
Cec03g0015 . 227 517 WRKY Transcription Factor Family AT1G13960 51.2 4.9e-70 261.9
Cec10g2249 . 143 370 WRKY Transcription Factor Family AT1G13960 53.7 2.1e-65 246.5
Cec10g0454 . 206 456 WRKY Transcription Factor Family AT1G13960 51.7 8.9e-64 241.1
Cec10g0454 . 25 575 WRKY Transcription Factor Family AT4G26640 53.1 1.4e-134 476.9
Cec05g2623 . 198 447 WRKY Transcription Factor Family AT4G26640 51.4 4.0e-65 246.1
Cec11g0476 . 230 469 WRKY Transcription Factor Family AT4G26640 51.0 4.0e-65 246.1
Cec03g0015 . 225 475 WRKY Transcription Factor Family AT5G07100 57.3 7.2e-69 257.3
Cec10g2249 . 128 357 WRKY Transcription Factor Family AT5G07100 57.3 2.7e-68 255.4
Cec02g2013 . 159 386 WRKY Transcription Factor Family AT5G07100 54.1 2.7e-60 228.8
Cec06g1425 . 192 513 WRKY Transcription Factor Family AT4G30935 60.3 1.7e-99 360.1
Cec03g0015 . 234 583 WRKY Transcription Factor Family AT2G38470 57.6 5.7e-96 348.6
Cec10g0393 . 342 626 WRKY Transcription Factor Family AT2G38470 52.1 2.3e-68 256.9
Cec05g2623 . 198 446 WRKY Transcription Factor Family AT2G38470 53.9 4.0e-65 246.1
Cec10g0454 . 214 456 WRKY Transcription Factor Family AT2G38470 52.9 3.2e-62 236.5
Cec03g0015 . 236 476 WRKY Transcription Factor Family AT4G26440 51.9 9.7e-65 245.0
Cec05g1527 . 78 169 WRKY Transcription Factor Family AT3G01970 77.2 2.0e-38 155.6
Cec07g1664 . 98 192 WRKY Transcription Factor Family AT3G01970 72.6 5.9e-38 154.1
Cec10g1303 . 12 311 WRKY Transcription Factor Family AT1G80840 52.8 9.7e-72 267.3
Cec02g0213 . 91 526 WRKY Transcription Factor Family AT1G62300 50.8 1.4e-100 364.0
Cec05g1163 . 215 327 WRKY Transcription Factor Family AT1G62300 69.9 4.7e-40 162.9
Cec06g1830 . 236 397 WRKY Transcription Factor Family AT1G62300 52.5 3.7e-37 153.3
Cec05g1163 . 65 326 WRKY Transcription Factor Family AT1G68150 52.3 2.4e-59 226.5
Cec06g1830 . 236 321 WRKY Transcription Factor Family AT1G68150 83.7 1.3e-38 157.5
Cec04g1884 . 333 430 WRKY Transcription Factor Family AT1G68150 74.5 5.6e-37 152.1
Cec04g1884 . 42 577 WRKY Transcription Factor Family AT4G22070 50.6 9.4e-110 394.4
Cec05g1163 . 207 327 WRKY Transcription Factor Family AT4G22070 66.1 5.1e-39 159.5
Cec02g0213 . 108 508 WRKY Transcription Factor Family AT4G04450 53.0 1.0e-90 330.9
Cec06g1830 . 236 397 WRKY Transcription Factor Family AT4G04450 52.5 5.0e-37 152.5
Cec02g0213 . 285 373 WRKY Transcription Factor Family AT1G18860 76.4 2.1e-37 154.1
Cec05g0011 . 85 205 WRKY Transcription Factor Family AT2G44745 70.3 6.2e-44 174.5
Cec02g0106 . 113 232 WRKY Transcription Factor Family AT2G44745 62.4 6.6e-38 154.5
Cec04g1276 . 144 228 WRKY Transcription Factor Family AT2G44745 78.8 9.6e-37 150.6
Cec02g0106 . 139 246 WRKY Transcription Factor Family AT4G39410 78.8 1.2e-45 180.6
Cec04g1276 . 137 247 WRKY Transcription Factor Family AT4G39410 73.0 3.6e-42 169.1
Cec06g0447 . 142 313 WRKY Transcription Factor Family AT2G47260 50.5 5.1e-37 152.1
Cec07g0864 . 78 174 WRKY Transcription Factor Family AT5G41570 80.4 1.1e-43 173.3
Cec04g2139 . 85 258 WRKY Transcription Factor Family AT4G18170 55.9 5.3e-44 175.3
Cec09g2349 . 60 146 WRKY Transcription Factor Family AT4G18170 83.9 6.7e-39 158.3
Cec05g0789 . 167 341 WRKY Transcription Factor Family AT5G49520 50.8 9.9e-40 161.4
Cec09g2349 . 59 192 WRKY Transcription Factor Family AT5G49520 59.9 2.7e-37 153.3
Cec07g0864 . 67 176 WRKY Transcription Factor Family AT1G64000 78.2 2.2e-45 179.1
Cec08g1058 . 109 289 WRKY Transcription Factor Family AT1G69310 59.8 5.8e-50 194.9
Cec06g0447 . 135 228 WRKY Transcription Factor Family AT1G69310 77.7 1.8e-38 156.8
Cec04g2139 . 77 250 WRKY Transcription Factor Family AT1G29860 57.8 1.4e-48 190.3
Cec09g2349 . 59 143 WRKY Transcription Factor Family AT1G29860 84.7 1.7e-38 156.8
Cec07g1664 . 94 192 WRKY Transcription Factor Family AT5G13080 82.8 3.2e-44 174.9
Cec05g1527 . 75 171 WRKY Transcription Factor Family AT5G13080 80.4 7.3e-41 163.7
Cec05g2882 . 1 294 WRKY Transcription Factor Family AT4G31550 60.0 1.1e-82 303.5
Cec06g1579 . 1 224 WRKY Transcription Factor Family AT4G31550 50.4 2.2e-51 199.5
Cec05g2882 . 1 350 WRKY Transcription Factor Family AT2G24570 60.3 4.6e-104 374.8
Cec09g0731 . 204 349 WRKY Transcription Factor Family AT2G24570 54.7 9.4e-41 164.5
Cec07g0096 . 1 341 WRKY Transcription Factor Family AT2G30590 54.2 3.9e-86 315.5
Cec09g0731 . 9 359 WRKY Transcription Factor Family AT2G30590 53.3 1.6e-84 310.1
Cec05g2240 . 213 372 WRKY Transcription Factor Family AT2G30590 59.9 6.1e-47 185.3
Cec02g0833 . 156 281 WRKY Transcription Factor Family AT2G30590 68.2 6.3e-44 175.3
Cec04g1391 . 175 282 WRKY Transcription Factor Family AT2G30590 75.5 6.3e-44 175.3
Cec05g2882 . 170 331 WRKY Transcription Factor Family AT2G30590 56.7 3.5e-42 169.5
Cec06g1579 . 120 262 WRKY Transcription Factor Family AT2G30590 56.5 3.8e-41 166.0
Cec07g0096 . 1 341 WRKY Transcription Factor Family AT5G28650 50.3 2.2e-77 286.2
Cec04g1391 . 132 283 WRKY Transcription Factor Family AT5G28650 61.8 1.0e-42 171.0
Cec02g0833 . 177 283 WRKY Transcription Factor Family AT5G28650 72.0 1.3e-40 164.1
Cec05g0152 . 131 229 WRKY Transcription Factor Family AT1G30650 64.3 5.0e-37 152.5
Cec03g0845 . 149 288 WRKY Transcription Factor Family AT4G01250 56.1 1.2e-37 154.1
Cec05g0152 . 137 237 WRKY Transcription Factor Family AT5G52830 73.5 3.0e-40 162.9
Cec04g2251 . 187 309 WRKY Transcription Factor Family AT2G34830 82.9 4.8e-56 215.7
Cec05g0152 . 134 229 WRKY Transcription Factor Family AT2G34830 67.9 1.3e-37 154.5
Cec03g0664 . 48 248 WRKY Transcription Factor Family AT1G29280 53.6 1.9e-52 203.0
Cec07g0301 . 42 300 WRKY Transcription Factor Family AT3G58710 54.9 2.2e-46 183.0
Cec02g0284 . 104 352 WRKY Transcription Factor Family AT2G04880 57.9 1.6e-78 290.4
Cec05g2882 . 1 294 WRKY Transcription Factor Family AT4G31550 60.0 1.1e-82 303.5
Cec06g1579 . 1 224 WRKY Transcription Factor Family AT4G31550 50.4 2.2e-51 199.5
Cec05g0011 . 85 205 WRKY Transcription Factor Family AT2G44745 70.3 6.2e-44 174.5
Cec02g0106 . 113 232 WRKY Transcription Factor Family AT2G44745 62.4 6.6e-38 154.5
Cec04g1276 . 144 228 WRKY Transcription Factor Family AT2G44745 78.8 9.6e-37 150.6
Cec02g0106 . 139 246 WRKY Transcription Factor Family AT4G39410 78.8 1.2e-45 180.6
Cec04g1276 . 137 247 WRKY Transcription Factor Family AT4G39410 73.0 3.6e-42 169.1
Cec05g0152 . 131 229 WRKY Transcription Factor Family AT1G30650 64.3 5.0e-37 152.5
Cec05g2882 . 1 350 WRKY Transcription Factor Family AT2G24570 60.3 4.6e-104 374.8
Cec09g0731 . 204 349 WRKY Transcription Factor Family AT2G24570 54.7 9.4e-41 164.5
Cec03g0015 . 236 476 WRKY Transcription Factor Family AT5G56270 53.6 2.7e-69 260.4
Cec10g0454 . 25 575 WRKY Transcription Factor Family AT4G26640 53.1 1.4e-134 476.9
Cec05g2623 . 198 447 WRKY Transcription Factor Family AT4G26640 51.4 4.0e-65 246.1
Cec11g0476 . 230 469 WRKY Transcription Factor Family AT4G26640 51.0 4.0e-65 246.1
Cec07g0096 . 1 341 WRKY Transcription Factor Family AT2G30590 54.2 3.9e-86 315.5
Cec09g0731 . 9 359 WRKY Transcription Factor Family AT2G30590 53.3 1.6e-84 310.1
Cec05g2240 . 213 372 WRKY Transcription Factor Family AT2G30590 59.9 6.1e-47 185.3
Cec02g0833 . 156 281 WRKY Transcription Factor Family AT2G30590 68.2 6.3e-44 175.3
Cec04g1391 . 175 282 WRKY Transcription Factor Family AT2G30590 75.5 6.3e-44 175.3
Cec05g2882 . 170 331 WRKY Transcription Factor Family AT2G30590 56.7 3.5e-42 169.5
Cec06g1579 . 120 262 WRKY Transcription Factor Family AT2G30590 56.5 3.8e-41 166.0
Cec03g0845 . 149 288 WRKY Transcription Factor Family AT4G01250 56.1 1.2e-37 154.1
Cec06g0447 . 142 313 WRKY Transcription Factor Family AT2G47260 50.5 5.1e-37 152.1
Cec07g0864 . 78 174 WRKY Transcription Factor Family AT5G41570 80.4 1.1e-43 173.3
Cec03g0015 . 225 475 WRKY Transcription Factor Family AT5G07100 57.3 7.2e-69 257.3
Cec10g2249 . 128 357 WRKY Transcription Factor Family AT5G07100 57.3 2.7e-68 255.4
Cec02g2013 . 159 386 WRKY Transcription Factor Family AT5G07100 54.1 2.7e-60 228.8
Cec05g0152 . 137 237 WRKY Transcription Factor Family AT5G52830 73.5 3.0e-40 162.9
Cec04g2139 . 85 258 WRKY Transcription Factor Family AT4G18170 55.9 5.3e-44 175.3
Cec09g2349 . 60 146 WRKY Transcription Factor Family AT4G18170 83.9 6.7e-39 158.3
Cec05g2623 . 18 491 WRKY Transcription Factor Family AT2G03340 51.5 4.4e-117 418.7
Cec11g0476 . 12 503 WRKY Transcription Factor Family AT2G03340 52.3 4.4e-117 418.7
Cec03g0015 . 228 489 WRKY Transcription Factor Family AT2G03340 53.2 1.0e-65 248.1
Cec04g1884 . 42 577 WRKY Transcription Factor Family AT4G22070 50.6 9.4e-110 394.4
Cec05g1163 . 207 327 WRKY Transcription Factor Family AT4G22070 66.1 5.1e-39 159.5
Cec06g1425 . 192 513 WRKY Transcription Factor Family AT4G30935 60.3 1.7e-99 360.1
Cec03g0015 . 234 583 WRKY Transcription Factor Family AT2G38470 57.6 5.7e-96 348.6
Cec10g0393 . 342 626 WRKY Transcription Factor Family AT2G38470 52.1 2.3e-68 256.9
Cec05g2623 . 198 446 WRKY Transcription Factor Family AT2G38470 53.9 4.0e-65 246.1
Cec10g0454 . 214 456 WRKY Transcription Factor Family AT2G38470 52.9 3.2e-62 236.5
Cec03g0015 . 236 476 WRKY Transcription Factor Family AT4G26440 51.9 9.7e-65 245.0
Cec04g2251 . 187 309 WRKY Transcription Factor Family AT2G34830 82.9 4.8e-56 215.7
Cec05g0152 . 134 229 WRKY Transcription Factor Family AT2G34830 67.9 1.3e-37 154.5
Cec05g2623 . 108 491 WRKY Transcription Factor Family AT1G13960 56.8 4.2e-98 355.1
Cec11g0476 . 139 503 WRKY Transcription Factor Family AT1G13960 51.3 1.9e-82 303.1
Cec03g0015 . 227 517 WRKY Transcription Factor Family AT1G13960 51.2 4.9e-70 261.9
Cec10g2249 . 143 370 WRKY Transcription Factor Family AT1G13960 53.7 2.1e-65 246.5
Cec10g0454 . 206 456 WRKY Transcription Factor Family AT1G13960 51.7 8.9e-64 241.1
Cec10g1303 . 12 311 WRKY Transcription Factor Family AT1G80840 52.8 9.7e-72 267.3
Cec02g0213 . 108 508 WRKY Transcription Factor Family AT4G04450 53.0 1.0e-90 330.9
Cec06g1830 . 236 397 WRKY Transcription Factor Family AT4G04450 52.5 5.0e-37 152.5
Cec05g1527 . 78 169 WRKY Transcription Factor Family AT3G01970 77.2 2.0e-38 155.6
Cec07g1664 . 98 192 WRKY Transcription Factor Family AT3G01970 72.6 5.9e-38 154.1
Cec05g0789 . 167 341 WRKY Transcription Factor Family AT5G49520 50.8 9.9e-40 161.4
Cec09g2349 . 59 192 WRKY Transcription Factor Family AT5G49520 59.9 2.7e-37 153.3
Cec07g0864 . 67 176 WRKY Transcription Factor Family AT1G64000 78.2 2.2e-45 179.1
Cec08g1058 . 109 289 WRKY Transcription Factor Family AT1G69310 59.8 5.8e-50 194.9
Cec06g0447 . 135 228 WRKY Transcription Factor Family AT1G69310 77.7 1.8e-38 156.8
Cec02g0213 . 91 526 WRKY Transcription Factor Family AT1G62300 50.8 1.4e-100 364.0
Cec05g1163 . 215 327 WRKY Transcription Factor Family AT1G62300 69.9 4.7e-40 162.9
Cec06g1830 . 236 397 WRKY Transcription Factor Family AT1G62300 52.5 3.7e-37 153.3
Cec02g0213 . 285 373 WRKY Transcription Factor Family AT1G18860 76.4 2.1e-37 154.1
Cec03g0664 . 48 248 WRKY Transcription Factor Family AT1G29280 53.6 1.9e-52 203.0
Cec07g0301 . 42 300 WRKY Transcription Factor Family AT3G58710 54.9 2.2e-46 183.0
Cec04g2139 . 77 250 WRKY Transcription Factor Family AT1G29860 57.8 1.4e-48 190.3
Cec09g2349 . 59 143 WRKY Transcription Factor Family AT1G29860 84.7 1.7e-38 156.8
Cec07g0096 . 1 341 WRKY Transcription Factor Family AT5G28650 50.3 2.2e-77 286.2
Cec04g1391 . 132 283 WRKY Transcription Factor Family AT5G28650 61.8 1.0e-42 171.0
Cec02g0833 . 177 283 WRKY Transcription Factor Family AT5G28650 72.0 1.3e-40 164.1
Cec07g1664 . 94 192 WRKY Transcription Factor Family AT5G13080 82.8 3.2e-44 174.9
Cec05g1527 . 75 171 WRKY Transcription Factor Family AT5G13080 80.4 7.3e-41 163.7
Cec05g1163 . 65 326 WRKY Transcription Factor Family AT1G68150 52.3 2.4e-59 226.5
Cec06g1830 . 236 321 WRKY Transcription Factor Family AT1G68150 83.7 1.3e-38 157.5
Cec04g1884 . 333 430 WRKY Transcription Factor Family AT1G68150 74.5 5.6e-37 152.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000978 3 3 1 1 3 3 4 3 3 2 3 3 3 3 3 3 3 3 3 3 2 3 3 2 3 3 2 3 4 3 84
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29594 PF03106 WRKY 4.20E-26 CL0274 Cec TF