Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1639 ATGAATTGTGAGAAGAACCCCATCATCGCCGACCTCCCTTCCGATCGAGCCAACGATTCCAAGGTCGGAAAGTTACCCCTCTGTTGCAACAACGGCACCATCTTACCGCCACTGATGGATCCAAGCAAAGCAAGGTCCATTTTTCAGCTCCAAGTCTATAAGCTTCCCCCTGACTTCAACAGAACAGCCTTGTACCCTCCTCAAAAATGGAAGATCAACGGCATTCTTAACCCCAATTACAAATGTGGAGCTCCTATTAGAGTTGATCCAACCCAATTTCCTGACTCAACTGGACTTCAATCCATAACCACAGCCATTGCAAGTTGGCAAGTGGTTTGCAATATTACTACTCCAAAACCCAAACAATCAAGATGTTGTGTTTCTTTCTCTGCTTATTATAATGACTCTGTTATCCCTTGCAATACTTGTGCTTGTGGATGTGATCAAACTCAAACTTGCAACCCAAATTCTTCCCCATTGCTTCTTCCACCAGAGGCCCTTTTAGTTCCATTTGACAATAGAACTCTAAAGGCAAAAGCTTGGGCCAAAATCAAACACTTTCCAATTCCAAAGAAACTCCCTTGTCCTGACAATTGTGGGGTTAGTTTAAATTGGCATATAAACTCAGATTATAACAGTGGTTGGACGGCGAGAATTACCCTTTTCAATTGGGAAGAATACCCTTTTGAGGATTGGTTTGCTGCTGTTCAATTGGATAAAGCTGCTAAAGGCTATGAGAATGTCTACTCTTTCAATGGGACTAAACTCCCACCAGATATGATCAAGAACACCATCTTTTTCCAAGGATTGGAAGGTCTTAATTACCTGATGGGGGAGATGAATGGGACGGACCCGAGATTCGATCCGCGAGTGCCAGGAAAGCAACAATCGGTAATCTCTTTCACTAAGAAGAATTTGAGGAACCTCAATATAAAGGAAGGAGATGGATTCCCTTCAAAGGTTTATTTCAATGGAGAAGAATGTGCACTTCCTCCTCATATTCCTTTAGGAAATGGTGCTGCTCACAGCCTCCATGTCAGCTCTGAACCTTTAATGCTGCTGCTCACAGTTATGGCTTTTTTCATTCTCTTCATCGATGGCTTTCATTGA 1110 42.79 MNCEKNPIIADLPSDRANDSKVGKLPLCCNNGTILPPLMDPSKARSIFQLQVYKLPPDFNRTALYPPQKWKINGILNPNYKCGAPIRVDPTQFPDSTGLQSITTAIASWQVVCNITTPKPKQSRCCVSFSAYYNDSVIPCNTCACGCDQTQTCNPNSSPLLLPPEALLVPFDNRTLKAKAWAKIKHFPIPKKLPCPDNCGVSLNWHINSDYNSGWTARITLFNWEEYPFEDWFAAVQLDKAAKGYENVYSFNGTKLPPDMIKNTIFFQGLEGLNYLMGEMNGTDPRFDPRVPGKQQSVISFTKKNLRNLNIKEGDGFPSKVYFNGEECALPPHIPLGNGAAHSLHVSSEPLMLLLTVMAFFILFIDGFH 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26333362 26334471 - CePI673135_05g016390.1 Cec05g1639 203442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1639 369 Pfam COBRA-like protein 1 116 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cec05g1639 369 PANTHER COBRA-LIKE PROTEIN 7 1 360 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0753 Cec-Chr5:6214228 Cec05g1639 Cec-Chr5:26333362 1.40E-125 dispersed
Cec05g1639 Cec-Chr5:26333362 Cec06g1749 Cec-Chr6:31021881 4.70E-28 dispersed
Cec10g0538 Cec-Chr10:6523575 Cec05g1639 Cec-Chr5:26333362 9.30E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1639 - - - 0.0