Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1657 ATGGCACGACGAGAGCGGCAACCACGACTAGCGGCATCCAGTGGGCATGTGGTTGAGCGAGGCGGCGTGAGATGTCTTTTGTCCAACAGCGAAATTCCGCCTTCTTTCCAACGCGTTTGGTCAAATGTTTGTAACGTCGCCCAATTCTTCGACCTTCTTTTGGTGGATCTGGTCAGAATCGGAGACCCATTGGAGGCCTTTCCACTCCGCTTACTTTTGATTTTCTGTCAAAAATGGGATTGCATTATGCGATTCTGTTTCTTTCAAGGGTTTTCTTCTTGCCCTTTTCCCCAATTCTTTCTAGGATTTTGTTTTGATCATTGGGATTCGTCATCTTCCAGCTATGTTTTGCGATTTTTATCACAAATTCTTCTTGGGTTTGCTCAGGGATTTTTGTTTACTTGTTGTCTTTTGACGTTCTGGGATTTCGAGGCAACTTGCTTGAAGGACCACGAGGAAGAGGAACTGATTCTGAGTCAACTAGTTGACCCAATTACTGGGGATGTCAACACAGAGATGGCTGAGCTGTTACTTGTTAAGTGCAACTTGGATTTGTTTCAGTTAAAGGAAGCTGCAGATGGTACTGACCTATGCTTTGAAGAAAGACCTGGAAGCAAAAATGGAATTAATTTTGAATGTCGGATGCTGACAAAAGAGAAAACAAACAGAATGCTAAGGGCCATGCATCCCCAGATGAAGCAGACTCTTTTAGATTGTTTAAGAAAGAATTTTCATGTCTCTGGGAAAGACTACAACTCTGAAGCTTGGTACACCAGGTATCTAGAGTCATTGTTTTTAATGCCTGGTAGTCTTAGAAGGAAGTTAAGTTCTAGATGGCTTCGAAGTTCTAAAGAAGTGCCTGCTCCGGCACCTGAATCTTCAGCAGATGAAAAACCTTCAAGAAAAGCTTCTAGCACAAGTGGTCAAAAAGAAAAGAAATCTAATAATCAACAAACAGTTATCATCGCTGTTGTTGTAACAGCAACAGTGACTTTTATTATTGTAGCTCTGCTATTTTTATGCTATAATAAGAGTGGTTCCAGAGTGAAGCAAAATGATGAAAATCATGAAAGGCCTCTCCTAAGCTTGAGTTTAAGTTCTTCGCCCAAATATTCTGCCTTTGGGAATTCTCTTAAGGATGACAAGTTCATGAGTCAATCATCTAGCTTGAGTCACCACCAGAGAGCTCCATCTTTGGATGGTAGCCTGCACATTGTCTCTGATGGTGCACGTACTTCAATGCAGGGACCTCCGTCTTTTGGAGCTACTGGAATTCCGAATAATTCATCTTTTGGATCAACAAATATGGCTGGCAGTACTAAGGGTTTGGTGCCACCTCCTCCAGGAGCAGTACCAGTCACCACCCCAGAAATCATACCTCCTTTGAAGCCTCCTCCTGGCAGGGCTGTTCCCCTGCCTCCTGAACGCCCTTCGTCTTTTAAGCCTCCATCCAACATGGCTAGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACCTCCTGCTGCAGCAGCAGCACCACCACCACCAAGACCTCCTGGAAATTCATGTCGCCCTCCAGGACCTCCTCCACCTCCACCACCTGCACCAGGCAAAGCAGGCCCTCGCCCACCACCACCTCCCAAAAGTGGTATTGCTCCTCCTCGGCCACCTCCATTAGCACCCAAAGGTGCAAATCCACCTCGACCTCCAAAGCCTTTTGCTTCAGGTGATGATGATATGGACGAATCAGGTGTTCCCAAAGCCAAATTGAAACCATTTTTCTGGGACAAAGTTCTTGCAAACCCCGACCATTCCATGGTCTGGCATCAGATTAAAGCAGGGTCTTTCCAATTCAATGAGGAGATGATAGAAACTCTTTTTGGATATACGCCTGTAGATAAAACCAAAACTGAGGGCAAGAAGGAGTCATCATCACAAGATCCTGCACAGCAGTACATTCAGATCATTGATTCAAAGAAAGCACAAAATCTTTCCATTCTTTTGCGAGCACTAAATGTGACAAAAGAAGAAGTCTGTGATGCGCTTCATGAAGGGACTGAACTTCCTTCTGAACTTCTTGAGAACTTACTGAGGATGGCACCAACTCCAGAAGAAGAACTCAAGCTTAGACTGTTTAGTGGGGAACTTTCTCAACTTGGAAATGCTGAGCGGTTCCTTAAATCTTTGGTTGATATCCCATTTGCTTTCAAAAGGTTGGAATCGCTGCTTTTCATGGGCACTCTTCAGGAGGACATCACCATCACTAAAGAGTCCTTTGCTAATTTGGAGGTTGCTTGCAAGGAACTTCGGAGCAGCAGGTTGTTCCTCAAACTTCTAGAAGCTGTTCTAAAGACTGGCAATCGGATGAACGATGGGACTTTTCGAGGTGGTGCACAAGCATTCAAATTGGACACTCTTTTAAAATTGTCGGATGTGAAAGGAAAAGATGGCAAGACTACGTTATTGCACTTTGTAGTTCAGGAGATAATTCGCACAGAAGGGATAAGAGCTGTTCGGAATGCCACAGGTAGCCAGAGCTTCTCAAGCACCTCATCAAAGGATCTGCTGGATGGATCTCCTAACGACCCCGAGGAGCATTACCGTACCTTGGGTCTTCAGGTTGTCTCGGGGCTGAGTGGTGAACTTCAGAATGTGAAGAAAGCAGCAACTATTGATGCAGATGCGTTGACTGGAACTGTTTCCAAACTTGGCCATGCACTGTTAAAGACAAGAGACTTTCTGAACAAAGACATGCAGGGTTTAGGTGAAGAGAGCCCATTTCATGATGCACTGAAAGTCTTTGTGCAGAGTGCTGAGGTTGATATCATGGCCCTCCTGGAAGAAGAAAAAAGAATCATGGAGTTGGTGAAAAGCACAGGCGACTACTTCCATGGAAATGCAGGGAAGGACGAGGGCTTACGGTTGTTTGTAATCGTACGAGATTTCTTGATAATGATAGATAAGACGTGCCGAGAAATAAAGGATGCACAGAAAAAGCAAGCGAAGGGACACAGAAAGGCAGCGTCGTCTTCTGATATCCATCACCCCCTTTCGTTGTCTTCTGATATCAATCACCCCCCTTTGTTGTCTACTGATACCAATCATCCCCCTTCGTCGTCTACCGATACCAGTCACCCCCCTTCGTCATCTACTGATACCAATCACCCCCCATCGTCGTCTACCGATACCAGTCACCCCCCTTCGTCGTCTACTAATATCAATCACCCCCCTTCAACTACAGCTTCTGATCTACGACACCCCCCTTCTCCTGATTTGAATCAGCTGATTTTCCCAGCAATTATTGATCGTCGGATGGGCAACTCAAGTTCAGACGATGATGATGAAAGTCCGTAG 3339 45.46 MARRERQPRLAASSGHVVERGGVRCLLSNSEIPPSFQRVWSNVCNVAQFFDLLLVDLVRIGDPLEAFPLRLLLIFCQKWDCIMRFCFFQGFSSCPFPQFFLGFCFDHWDSSSSSYVLRFLSQILLGFAQGFLFTCCLLTFWDFEATCLKDHEEEELILSQLVDPITGDVNTEMAELLLVKCNLDLFQLKEAADGTDLCFEERPGSKNGINFECRMLTKEKTNRMLRAMHPQMKQTLLDCLRKNFHVSGKDYNSEAWYTRYLESLFLMPGSLRRKLSSRWLRSSKEVPAPAPESSADEKPSRKASSTSGQKEKKSNNQQTVIIAVVVTATVTFIIVALLFLCYNKSGSRVKQNDENHERPLLSLSLSSSPKYSAFGNSLKDDKFMSQSSSLSHHQRAPSLDGSLHIVSDGARTSMQGPPSFGATGIPNNSSFGSTNMAGSTKGLVPPPPGAVPVTTPEIIPPLKPPPGRAVPLPPERPSSFKPPSNMASPPPPPPPPPPPPPPAAAAAPPPPRPPGNSCRPPGPPPPPPPAPGKAGPRPPPPPKSGIAPPRPPPLAPKGANPPRPPKPFASGDDDMDESGVPKAKLKPFFWDKVLANPDHSMVWHQIKAGSFQFNEEMIETLFGYTPVDKTKTEGKKESSSQDPAQQYIQIIDSKKAQNLSILLRALNVTKEEVCDALHEGTELPSELLENLLRMAPTPEEELKLRLFSGELSQLGNAERFLKSLVDIPFAFKRLESLLFMGTLQEDITITKESFANLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGKDGKTTLLHFVVQEIIRTEGIRAVRNATGSQSFSSTSSKDLLDGSPNDPEEHYRTLGLQVVSGLSGELQNVKKAATIDADALTGTVSKLGHALLKTRDFLNKDMQGLGEESPFHDALKVFVQSAEVDIMALLEEEKRIMELVKSTGDYFHGNAGKDEGLRLFVIVRDFLIMIDKTCREIKDAQKKQAKGHRKAASSSDIHHPLSLSSDINHPPLLSTDTNHPPSSSTDTSHPPSSSTDTNHPPSSSTDTSHPPSSSTNINHPPSTTASDLRHPPSPDLNQLIFPAIIDRRMGNSSSDDDDESP 1112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27272658 27280336 + CePI673135_05g016570.1 Cec05g1657 203460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1657 1112 MobiDBLite consensus disorder prediction 282 314 - -
Cec05g1657 1112 MobiDBLite consensus disorder prediction 836 857 - -
Cec05g1657 1112 MobiDBLite consensus disorder prediction 836 852 - -
Cec05g1657 1112 Pfam Formin Homology 2 Domain 581 980 IPR015425 -
Cec05g1657 1112 MobiDBLite consensus disorder prediction 445 568 - -
Cec05g1657 1112 SMART it6_source 575 995 IPR015425 -
Cec05g1657 1112 Gene3D Formin, FH2 domain 580 1010 IPR042201 -
Cec05g1657 1112 ProSiteProfiles Formin homology-2 (FH2) domain profile. 575 1007 IPR015425 -
Cec05g1657 1112 MobiDBLite consensus disorder prediction 1008 1082 - -
Cec05g1657 1112 PANTHER FORMIN-RELATED 284 1108 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cec05g1657 1112 SUPERFAMILY Formin homology 2 domain (FH2 domain) 646 1002 - -
Cec05g1657 1112 MobiDBLite consensus disorder prediction 408 580 - -
Cec05g1657 1112 MobiDBLite consensus disorder prediction 992 1112 - -
Cec05g1657 1112 MobiDBLite consensus disorder prediction 408 440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1657 Cec-Chr5:27272658 Cec11g0101 Cec-Chr11:1230218 5.80E-98 dispersed
Cec03g1767 Cec-Chr3:35954173 Cec05g1657 Cec-Chr5:27272658 7.30E-99 transposed
Cec05g2724 Cec-Chr5:37755204 Cec05g1657 Cec-Chr5:27272658 5.20E-83 transposed
Cec07g0284 Cec-Chr7:2808091 Cec05g1657 Cec-Chr5:27272658 2.10E-100 transposed
Cec08g0918 Cec-Chr8:21009271 Cec05g1657 Cec-Chr5:27272658 1.70E-71 transposed
Cec02g0866 Cec-Chr2:10756652 Cec05g1657 Cec-Chr5:27272658 5.90E-155 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1657 K28090 - csv:101213072 910.598