Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1659 ATGCCAACAGTTTGGTTTTCTCTGAAAAAGTCCTTCCCTTGCAAGCCAGAGCCATCAGAAGTCTATGATCCAAAGTGCAGGAAACAACTCAACACAATCACAACTAAGAAAGCATCCAGAAAGTCAGGTTGTTCTTCTGGAAGGTCTGGTTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCACATGGAAAAACCACCGATTTGCAGCCCGAGGTCGATTGGTAGCAGCGAGTTCCTCAACCCAATTGCTCATGAAGTCATACTGAGCAACTCAAAGTGTGAGCTCAAAATCACTGGTTTTGGAAGCTTCCACCAAGAGGGTGTAGGAAATGCTGGCTTTGGGGGGGGCGCAGGTGGGAACTCACCATTTTCCGGTACACTAAGACCCGGAACTCCTGGTCCAGGGGAGCACTTTGTTAACAACTCCAGTTCTCCTTTTAGTACTACCTCCATATCTGCTGCAAGAAAGCTTCCTTCTCTTAGAGATGAGCCTGCGGCTGGGAGTACTGCTAAATCTAAGGTGGGTGGGGAAATTCATACAAGCAAAAGGTTCTCCCCGCTAACCGAACTAAACGGTAATGCATTTTCGACGGTTACTTGCCATAAATGTGGAGAGCAGTTTTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCTAAGCATGCTGTTACCGAGCTTGTGGAAGGTGATTCATCGAGGAAAATTGTTGAAATAATATGTCGAACGAACTTGTTGAAATCAGAGAACAATGGCAACCGTATCGAACGAGTCTTCAAAGTTCACAATATGCAAAAAACGTTAGCTGGATTTGAAGAATACAGGGAAATGGTGAAGATCAAGGCAAGCAAGCTTTCAAAGAAACACCCTCGATGCCTTGCGGATGGGAACGAGCTGCTGAGGTTTTACGGGACTACTTTAGGCTGCTCTCTTGGACTAAATGGCTCCTCCAGCCTCTGCATATCACAGAAATGCAATGTCTGCAGAATTATAAGGAATGGTTTCTCAGCAAAGAAGGATATGAAAGAAGAAGTAGGAGTTTTCACGACTTCGACGAGCGGAAAAGCTTTCGAAACCATTGAAACGACAGAAGAAAGCTCAGTAAAGAAAGCATTGATAATCTGCAGAGTGATTGCAGGGAGGGTTCATAGGCCTTTGGAGAATATACAAGATATAGTTGGCCAAACAGGGTTTGATTCTCTAGCTGGCAAAGTGGGATTACATTCCAACATTGAAGAGCTTTATTTGCTCAGTCCTAGAGCTTTGCTTCCTTGTTTTATTGTAATTTGCAAGCCATGA 1317 44.57 MPTVWFSLKKSFPCKPEPSEVYDPKCRKQLNTITTKKASRKSGCSSGRSGCSRSIANLKDVIHGSKRHMEKPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGSFHQEGVGNAGFGGGAGGNSPFSGTLRPGTPGPGEHFVNNSSSPFSTTSISAARKLPSLRDEPAAGSTAKSKVGGEIHTSKRFSPLTELNGNAFSTVTCHKCGEQFCKLEAAESHHLSKHAVTELVEGDSSRKIVEIICRTNLLKSENNGNRIERVFKVHNMQKTLAGFEEYREMVKIKASKLSKKHPRCLADGNELLRFYGTTLGCSLGLNGSSSLCISQKCNVCRIIRNGFSAKKDMKEEVGVFTTSTSGKAFETIETTEESSVKKALIICRVIAGRVHRPLENIQDIVGQTGFDSLAGKVGLHSNIEELYLLSPRALLPCFIVICKP 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27332078 27333750 + CePI673135_05g016590.1 Cec05g1659 203462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1659 438 FunFam C2H2-like zinc finger protein 229 437 - -
Cec05g1659 438 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 437 - -
Cec05g1659 438 MobiDBLite consensus disorder prediction 120 184 - -
Cec05g1659 438 ProSitePatterns Zinc finger C2H2 type domain signature. 207 228 IPR013087 -
Cec05g1659 438 MobiDBLite consensus disorder prediction 143 162 - -
Cec05g1659 438 Gene3D - 235 437 - -
Cec05g1659 438 SUPERFAMILY ADP-ribosylation 230 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1943 Cec-Chr4:37751349 Cec05g1659 Cec-Chr5:27332078 6.90E-58 dispersed
Cec05g1659 Cec-Chr5:27332078 Cec10g0598 Cec-Chr10:7905361 2.80E-165 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1659 - - - 0.0