Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1681 ATGCTCAAAAAGACAAAAATGGCAAATGCTTCACTAACTCTGTTTCTGTCTCTGTCTCTGTTTCTCTTCTCTTCACCGTCTGTGGCTGTTGATTTCATAATTTCCTCACAAAACCTCACCCATGGCGCCACTCTTATCTCCGCAAAAGAATTTTTTGAACTGGGTTTCTTCAGCCCAGGAAATTCCACCAACCGTTACTTGGGCATTTGGTACAAAATCATCCCAGTTCGTACAATCGTTTGGGTCGCCAACAGAGAAAACCCCATCACTAATTCTTCCGCTGCTGTCGTTCTCAAAATCAACACCACCACCAGCGATCTCCTCCTTTTTGAGAACGACGCCGTTGTTTGGGTTGGAAAATCGTTGAAACCAGTAAAAACCCCCAAACTACACCTCTTAGACAATGGAAATCTGGTGTTGAAAGACGCTGAATCAGAGAAAATTTCATGGCAAAGCTTCGATTACCCAACGGATACATTACTTCCCGGAATGAAACTCGGATGGGACTTCGAAAATAGAATCCAACGCCGATTATCCGCTTGGAAATCCTCCGATGACCCATCTCCAGGAAGTTTAACGATGGAAATGATGAACACAAACTACCCAGAACCAGTGATGTGGAATGGGTCGAAAGAGTTCATGAGAAGCGGACCATGGAACGGCCTTCAATTCAGCGCAAAACCCACATCGGCTTTACCGATTTTAGTGTACAGCTATGTAAACAACAAATCCGAGCTCACTTACAGCTACGAGCTCATAAACTCTTCGTTAATCGGAAGAATGGTGTTGAATCAAACGCTATTCAGAAGAGAAGCTTTGTTATGGTCTGCATCGGAGAATATTTGGAAGCTGTATGCGACTATGCCGAGGGATTACTGCGATACTTACGGACTTTGTGGTGCGTTTGGGAGCTGTGACATTGAGCAAGTGCCTGCTTGTCAATGTCTAAGAGGGTTTCATCCCAAAGTACAAGAGAAATGGAATTTGATGGATTATACTGAAGGGTGTGTGAGGAATAAGGCTTTGAATTGTTCTGATAAAACTGGGTTTGCAAAGGTTCCGGGGTTGAAATTGCCTGATACAAAGCAGTCTTGGGTTAATGAAAGTATGAGTTTGAATGAATGTAGAGATAAGTGTTTGAGGAATTGTTCTTGTGTGGCGTTTGCTAATACTGATATTAGAGGATCAGGGAGTGGTTGTGCTATTTGGTTTGGGGATCTTGTTGATATCAAAGTTGTTCGAAAAGGAGGCCAGGATTTGTATGTTAGACTGTTGGCTTCTGAATTGGAGACAAAGAAGACGAGTTCCGTTGTCGTCGGCGTTATCGTCGGAGCGGCGATTCTGGTGATTGCTGGTCTGGCTTTGATTGGGTTTTACCTTATTAGAAGCAGGAGGAGAAGTCTCCAAGGTGTTGGCAAGGATCTGGAAGGGCAAGAAGAAGATTTGGAGCTCCCATTAGTCGACTTAACAACAATATCTAATGCCACAGACAATTTTTCGAACTCCAACAAGCTTGGAGAAGGTGGTTTTGGTGAAGTCTTTCGGGGTAGACTTGGAGATGGACAAGAAATTGCAGTTAAGAGACTTTCTAGCTATTCAAGACAAGGGACCGATGAATTCAAGAATGAAGTGATACTCATTGCCAAACTTCAACATAGAAATCTTGTAAAACTTTTGGGTTGTTGCATACAAGGAGAGGAAAAGATGTTGATTTATGAATACATGCCTAATAAGAGTTTGGACTCCTTCATTTTTGATCCTGCTAGAAAGAAGCTTTTGGATTGGTCGAAAAGATTCAATATCATATGCGGAATAGCTCGAGGGATTCTTTACCTTCATCAAGATTCGAGATTGAGGATTATACATAGAGATTTAAAAGCAAGCAATGTCTTGCTTGATATTGACATGAATCCAAAAATCTCAGATTTTGGAATGGCTAGAACGTTTGGAGGGGACCAAACGGAAGGAAATACTAGGAGAGTGGTCGGAACATATGGGTATATGGCACCAGAGTACGCCATTGATGGGCAATTTTCCATCAAGTCAGACGTCTTTAGTTTTGGAATATTATTGTTGGAAATTATAAGTGGAGAGAAGAATAGAGGGTTTTTTCGTCCTAACCATGCTCTAAACCTGATTGGACATGCATGGAAGTTATGGAATGAAGGGAAGCCATTAGAGTTGATTGATGCAACCATTGGAGAATCTTATGCTCTATCTGAAGTGTTGAGATGCATTCATGTTAGCCTCTTGTGCTTGCAACAACTTCCCGAGGATAGACCGACCATGTCAAATGTAGTTCTAATGCTAAGTAGTGAGAGCTCATTGCCACAACCAAAACAACCAGGATTTTACATGGAAAGAGATTCTCTTGAAGCATTTTCTCTTGATGGCAAGAATGAATCTTCTACTACCAATGAATTAACTATTACCCTCTTGGAGGCTAGATAA 2451 41.78 MLKKTKMANASLTLFLSLSLFLFSSPSVAVDFIISSQNLTHGATLISAKEFFELGFFSPGNSTNRYLGIWYKIIPVRTIVWVANRENPITNSSAAVVLKINTTTSDLLLFENDAVVWVGKSLKPVKTPKLHLLDNGNLVLKDAESEKISWQSFDYPTDTLLPGMKLGWDFENRIQRRLSAWKSSDDPSPGSLTMEMMNTNYPEPVMWNGSKEFMRSGPWNGLQFSAKPTSALPILVYSYVNNKSELTYSYELINSSLIGRMVLNQTLFRREALLWSASENIWKLYATMPRDYCDTYGLCGAFGSCDIEQVPACQCLRGFHPKVQEKWNLMDYTEGCVRNKALNCSDKTGFAKVPGLKLPDTKQSWVNESMSLNECRDKCLRNCSCVAFANTDIRGSGSGCAIWFGDLVDIKVVRKGGQDLYVRLLASELETKKTSSVVVGVIVGAAILVIAGLALIGFYLIRSRRRSLQGVGKDLEGQEEDLELPLVDLTTISNATDNFSNSNKLGEGGFGEVFRGRLGDGQEIAVKRLSSYSRQGTDEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDSFIFDPARKKLLDWSKRFNIICGIARGILYLHQDSRLRIIHRDLKASNVLLDIDMNPKISDFGMARTFGGDQTEGNTRRVVGTYGYMAPEYAIDGQFSIKSDVFSFGILLLEIISGEKNRGFFRPNHALNLIGHAWKLWNEGKPLELIDATIGESYALSEVLRCIHVSLLCLQQLPEDRPTMSNVVLMLSSESSLPQPKQPGFYMERDSLEAFSLDGKNESSTTNELTITLLEAR 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 27885745 27889980 - CePI673135_05g016810.1 Cec05g1681 203484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1681 816 PIRSF SRK 3 816 IPR024171 GO:0004674(InterPro)
Cec05g1681 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1681 816 Gene3D Transferase(Phosphotransferase) domain 1 575 781 - -
Cec05g1681 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Cec05g1681 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 187 IPR036426 -
Cec05g1681 816 CDD PAN_AP_plant 342 424 - -
Cec05g1681 816 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Cec05g1681 816 SUPERFAMILY Protein kinase-like (PK-like) 484 770 IPR011009 -
Cec05g1681 816 SMART serkin_6 499 770 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1681 816 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1681 816 ProSiteProfiles Bulb-type lectin domain profile. 30 153 IPR001480 -
Cec05g1681 816 SMART blect_4 36 156 IPR001480 -
Cec05g1681 816 Gene3D - 27 153 IPR036426 -
Cec05g1681 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 343 424 - -
Cec05g1681 816 Pfam Domain of unknown function (DUF3403) 771 816 IPR021820 GO:0004674(InterPro)
Cec05g1681 816 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1681 816 Gene3D Phosphorylase Kinase; domain 1 468 574 - -
Cec05g1681 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 574 - -
Cec05g1681 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 30 784 - -
Cec05g1681 816 CDD STKc_IRAK 505 770 - -
Cec05g1681 816 Pfam S-locus glycoprotein domain 215 322 IPR000858 GO:0048544(InterPro)
Cec05g1681 816 Pfam D-mannose binding lectin 78 182 IPR001480 -
Cec05g1681 816 CDD B_lectin 39 156 IPR001480 -
Cec05g1681 816 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524(InterPro)
Cec05g1681 816 Pfam PAN-like domain 344 410 IPR003609 -
Cec05g1681 816 SMART ntp_6 345 424 IPR003609 -
Cec05g1681 816 Gene3D Hepatocyte Growth Factor 340 425 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0155 Cec-Chr2:1554754 Cec05g1681 Cec-Chr5:27885745 2.30E-144 dispersed
Cec03g0515 Cec-Chr3:5422635 Cec05g1681 Cec-Chr5:27885745 2.20E-09 dispersed
Cec03g0516 Cec-Chr3:5423114 Cec05g1681 Cec-Chr5:27885745 1.00E-24 dispersed
Cec03g0522 Cec-Chr3:5467923 Cec05g1681 Cec-Chr5:27885745 2.60E-215 dispersed
Cec03g0523 Cec-Chr3:5476079 Cec05g1681 Cec-Chr5:27885745 3.80E-195 dispersed
Cec04g1949 Cec-Chr4:37796211 Cec05g1681 Cec-Chr5:27885745 5.60E-181 dispersed
Cec05g1681 Cec-Chr5:27885745 Cec10g0596 Cec-Chr10:7888022 1.60E-270 dispersed
Cec09g0257 Cec-Chr9:2265806 Cec05g1681 Cec-Chr5:27885745 1.80E-109 transposed
Cec03g0514 Cec-Chr3:5419790 Cec05g1681 Cec-Chr5:27885745 2.20E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72011 PF07714 PK_Tyr_Ser-Thr 1.70E-48 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1681 - - - 0.0