Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1691 ATGGCGGACTACGGCGGCCACAATCTGGAAGTGGATCCAAGAAGCGGCTTCTGCAAATCCACAAAAATCTTCCACAGCAAACGCCGCCCAATCCCACTTCCCCCTAACCAATCCCTCGATGCGACGACCTTTATCTCTTCCCGCCCTCACAACGGCAAAATCGCCCTCATCGACGCCACCACCGGCCAACAAATCACCTATTCCCACCTCTGGAACTCCGTCGACGCCGTAGCCTCTTCCCTTTCCTACATGGGCATCCGAAAAGGCCACGTCATCCTCCTCCTTTCCCCTAACTCCATTTACTTTCCCATTATTTGCCTCGCCGTCATGTCCATCGGCGCCATCATCACCACCACAAATCCCCTCAACACCCCTCAAGAAATCGCCAAACAAATCGCCGATTCCAAACCCATTTTAGCCTTCACTACCCAACAACTAATCCCCAAAATCGCCGCTTCCAAATTGCCAATCGTCATAATCGACGGTCAAGTTCCAAAATCCCCAGTCAAAATCGTGTCGACATTGAGCGAAATGATGAGGGAAAAACCAAGTGATAGTCGAATTAAGGAACGCGTGGAGCAAAACGACACAGCGACTCTGCTTTATTCATCTGGAACGACAGGGGCGAGCAAAGGCGTAGTGTCGTCTCACAAGAATTTAATTGCAATGGTTCAAGTGGTTGTGACGAGGTTCAAATTAAGCGAAGGGGAAGGGACTTTTATTTGTACGGTCCCAATGTTTCATATTTACGGCCTTGTGGCTTTCGCTACTGGGTTGCTCTCTTCGGGATCCACAATCGTTGTATTATCGAAGTTTGAGATTCATGAAATGTTGTCGGCGATTGACAAGTACAAGGCCACGTATCTGCCTCTTGTGCCGCCGATTCTGGTGGCGCTCGTGAACGCCGCCGACCAGATAAAGGGCAAGTACGATTTGGGGTCGTTGCACACGGCGTTGTCCGGCGGAGCGCCGCTTGGGAAGGAGGTGATTGAGGGTTTTGTTGAGAAATATCCGAACGTCGCAATTCTTCAGGGTTATGGATTGACGGAATCCACCGGAATTGGGGCGTCCACCGATTCGCTGGAGGAGAGCCGCCGATACGGCACGGCGGGTCTTCTGTCGCCGAGCACTGAGGGCATGATTGTTGACCCGGAAACCGGCGAGGCTCTTCCCGTGAACCGGACCGGAGAACTTTGGCTTAGAGGGCCCACCGTAATGAAAGGGTACTTTGGTAACATGGAGGCCACAACCTCAACACTTGATTCAGAGGGATGGTTGAGAACCGGTGATCTGTGTTATATTGATGAAGATGGTTTTATTTTTGTAGTTGATAGGCTGAAGGAACTAATCAAATATAAGGGATACCAGGTACCTCCTGCTGAATTAGAGGCGTTCTTGCTTACTCATCCTAATATCTCCGATGCAGCTGTGATTCCATATCCAGACAAAGAGGTTGGACAGTATCCGATGGCTTATGTGGTAAGGAAGGGTGGAAGCGACATTTCACCTGAAGATGTAATGCAATTTGTGGCAAAACAGGTGGCGCCGTACAAAAGAATCCGGCGGGTGGCGTTCGTGGGTTCCATTCCCAAGAATCCGTCCGGCAAGATTCTTAGAAAGGATCTCATAAAGCTCGCAACCTCCAAACTGTGA 1653 50.39 MADYGGHNLEVDPRSGFCKSTKIFHSKRRPIPLPPNQSLDATTFISSRPHNGKIALIDATTGQQITYSHLWNSVDAVASSLSYMGIRKGHVILLLSPNSIYFPIICLAVMSIGAIITTTNPLNTPQEIAKQIADSKPILAFTTQQLIPKIAASKLPIVIIDGQVPKSPVKIVSTLSEMMREKPSDSRIKERVEQNDTATLLYSSGTTGASKGVVSSHKNLIAMVQVVVTRFKLSEGEGTFICTVPMFHIYGLVAFATGLLSSGSTIVVLSKFEIHEMLSAIDKYKATYLPLVPPILVALVNAADQIKGKYDLGSLHTALSGGAPLGKEVIEGFVEKYPNVAILQGYGLTESTGIGASTDSLEESRRYGTAGLLSPSTEGMIVDPETGEALPVNRTGELWLRGPTVMKGYFGNMEATTSTLDSEGWLRTGDLCYIDEDGFIFVVDRLKELIKYKGYQVPPAELEAFLLTHPNISDAAVIPYPDKEVGQYPMAYVVRKGGSDISPEDVMQFVAKQVAPYKRIRRVAFVGSIPKNPSGKILRKDLIKLATSKL 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28083572 28089037 + CePI673135_05g016910.1 Cec05g1691 203494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1691 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 542 - GO:0005777(PANTHER)|GO:0016405(PANTHER)
Cec05g1691 550 FunFam 4-coumarate--CoA ligase 2 448 549 - -
Cec05g1691 550 Pfam AMP-binding enzyme C-terminal domain 461 536 IPR025110 -
Cec05g1691 550 Pfam AMP-binding enzyme 50 410 IPR000873 -
Cec05g1691 550 Gene3D - 21 447 IPR042099 -
Cec05g1691 550 CDD 4CL 33 542 - -
Cec05g1691 550 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Cec05g1691 550 Gene3D - 448 549 IPR045851 -
Cec05g1691 550 SUPERFAMILY Acetyl-CoA synthetase-like 44 548 - -
Cec05g1691 550 FunFam Long-chain-fatty-acid--CoA ligase FadD 25 447 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0347 Cec-Chr3:3879341 Cec05g1691 Cec-Chr5:28083572 6.20E-133 dispersed
Cec03g0348 Cec-Chr3:3889011 Cec05g1691 Cec-Chr5:28083572 5.60E-134 dispersed
Cec05g1691 Cec-Chr5:28083572 Cec05g2359 Cec-Chr5:34845651 3.00E-127 dispersed
Cec05g1691 Cec-Chr5:28083572 Cec06g1526 Cec-Chr6:28765352 1.20E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1691 K10526 - csv:101221396 1004.59