Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1693 ATGGCGCCTTCAGCTCCGTCAAGCTCAGCCCCTGAATTTCAAATGCCCAAAAAGCCACTTAATTTATTCGCTAACGCACTAAAACGCAAGGACAGCTTCATTCAGTTCTTCGCCATGACTGGTATTTTGCTTCTAAGCTTCCGATCTTTGGGTCAGAAGTACCCCTCCTTCATGAGGCATCGCTCGACTCCACTGGCCTCTTCGCATCCAGGCTTCGCCTTCTCTTCAGCGAAGAAGATTAAGTGCTTTAACTCTTCAATCTGTTCTGTAACTTTGCCGCGATTAGGGGTATCTGCTTGCTTGGCTTGGCGTTTTGGTTTATTCGATTGCATAATTATGTGGTATGGTTTCAATAATGTTCAGTCCACATGCAGCAAAAGGGAAGGTTGGCAGCTGTCTGTGGTCTGTGCATTCCTCTGCTTCTTCTCCACCGCCTCTGCTGAAAATCCCTACCGTTTCTTCACCTGGAATGTCTCTTACGCCAACATTTACCCTCTCGGCGTTCGCCAGCAGGGAATACTCATCAATGGCCAATTCCCTGGCCCTGACATCCACTGCGTCACTAATGACAACCTCATCATCAATGTCTTCAACAGCTTGGACGAGCCCTTCCTCATTTCCTGGAACGGAATTCAGCAGAGAAGAAACTCATACGAAGACGGTGTTTATGGAACAACGTGCCCAATCCCTCCCGGGAAGAACTTTACGTACATTCTCCAAGTCAAGGATCAGATCGGCAGCTTTTACTATTTCCCTTCTCTGGCCTTCCACAAGGCCGCCGGCGGTTTCGGCGGAATCAGAATCCTCAGCCGCCCCCGGATTCCGGTCCCCTTTCCCGATCCCGCCGGCGACTACACCGTCCTCATCGGCGACTGGTATAAGTCCAATCACACGACCCTGAAGGCTCATCTGGATCGTGGGAAGAAGCTTCCGTTTCCAGATGGAATCCTCATCAATGGTCGTGGCAATGATACCTCTTTTAGCGTCGAACAAGGAAAAACCTACAGGTTGAGAATTTCAAATGTGGGGCTTCAGCATTCCCTAAACTTCCGAATTCAAGGTCATAAAATGAAGCTTGTAGAAGTGGAGGGAACACATACGCTTCAAACGACCTACTCCTCGCTCGACGTTCATGTTGGTCAGTCATACTCTGTGCTCGTCACAGCTGATCAGCCAGCTCAGGACTACTACATTGTTGTCTCCACTCGCTTCACTTCTCGGGTGCTCACTACCACTGGCATTCTTCGTTACAGTAACTCTGCTGGCCCTGTCAAAGGTCCCCTTCCTGGCGGTCCAACAATACAAATCGATTGGTCCCTCAACCAAGCACGCTCTATTAGGACCAATCTTACAGCCAGTGGACCAAGGCCAAACCCACAAGGGTCATATCACTATGGTCTCATAAACACAACCAAAACCATCATACTTGCCAATTCTGCTGGTCAAGTCAACCGCAAACAAAGGTATGCGGTTAACAGTGTGTCATTCGTCCCTGCTGACACTCCCTTGAAGCTTGCGGACTTCTTCAACATTGGAGGGGTTTTTCGCGTTGGAAGCATCTCTGATAGGCCTACTGGTGGAGGAATCTACCTCGACACATCCGTGATGGGTGCAGACTATAGAGCGTTTGTTGAAATTGTGTTCCAAAACAATGAGAACATTGTCCAAAGTTGGCACATTGATGGTTACTCTTTCTTCGTGGTCGGCATGGATGGAGGCCAATGGACGCAATCTAGCAGAAATCAATACAATCTTCGGGATGCAATTGCTCGTTGCACGACTCAGGTATACCCGTATTCATGGACTGCAATTTACGTGGCCCTCGATAACGTAGGGATGTGGAATGTGAGGTCAGAGTTTTGGGCAAGACAGTATCTTGGACAACAATTCTACCTCCGTGTGTATACGCCATCGACTTCACTCAGGGACGAGTTCCCCATTCCAAAGAATGCTCTTCTTTGTGGCAGGGCAAAGGGAATATCTATAGTTAGACCACCCGGTCCTCCAATCGACCCCGAGCTGGGACCCCAGCTCGGGGTCGGGTCACATTCTTTTGCTAGTGTGAATCTTTTATTGTTGACCTTTGTCACGCTTTTCAATGGAGCATAG 2109 48.93 MAPSAPSSSAPEFQMPKKPLNLFANALKRKDSFIQFFAMTGILLLSFRSLGQKYPSFMRHRSTPLASSHPGFAFSSAKKIKCFNSSICSVTLPRLGVSACLAWRFGLFDCIIMWYGFNNVQSTCSKREGWQLSVVCAFLCFFSTASAENPYRFFTWNVSYANIYPLGVRQQGILINGQFPGPDIHCVTNDNLIINVFNSLDEPFLISWNGIQQRRNSYEDGVYGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTTLKAHLDRGKKLPFPDGILINGRGNDTSFSVEQGKTYRLRISNVGLQHSLNFRIQGHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAQDYYIVVSTRFTSRVLTTTGILRYSNSAGPVKGPLPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILANSAGQVNRKQRYAVNSVSFVPADTPLKLADFFNIGGVFRVGSISDRPTGGGIYLDTSVMGADYRAFVEIVFQNNENIVQSWHIDGYSFFVVGMDGGQWTQSSRNQYNLRDAIARCTTQVYPYSWTAIYVALDNVGMWNVRSEFWARQYLGQQFYLRVYTPSTSLRDEFPIPKNALLCGRAKGISIVRPPGPPIDPELGPQLGVGSHSFASVNLLLLTFVTLFNGA 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28125720 28135293 + CePI673135_05g016930.1 Cec05g1693 203496

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1693 702 Gene3D - 282 454 IPR008972 -
Cec05g1693 702 Pfam Multicopper oxidase 158 271 IPR011707 GO:0005507(InterPro)
Cec05g1693 702 CDD CuRO_3_AAO_like_1 498 619 IPR034275 GO:0005507(InterPro)
Cec05g1693 702 Gene3D - 151 272 IPR008972 -
Cec05g1693 702 SUPERFAMILY Cupredoxins 467 656 IPR008972 -
Cec05g1693 702 FunFam Monocopper oxidase-like protein 467 663 - -
Cec05g1693 702 Pfam Multicopper oxidase 501 637 IPR011706 GO:0005507(InterPro)|GO:0016491(InterPro)
Cec05g1693 702 CDD CuRO_1_AAO_like_1 153 268 IPR034273 GO:0005507(InterPro)
Cec05g1693 702 FunFam Monocopper oxidase-like protein 282 455 - -
Cec05g1693 702 Pfam Multicopper oxidase 284 420 IPR001117 -
Cec05g1693 702 PANTHER MULTI-COPPER OXIDASE 151 634 IPR045087 GO:0016491(PANTHER)
Cec05g1693 702 Gene3D - 466 662 IPR008972 -
Cec05g1693 702 SUPERFAMILY Cupredoxins 147 298 IPR008972 -
Cec05g1693 702 FunFam L-ascorbate oxidase homolog 151 272 - -
Cec05g1693 702 CDD CuRO_2_AAO_like_1 283 417 IPR034271 -
Cec05g1693 702 SUPERFAMILY Cupredoxins 278 457 IPR008972 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1693 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0388 Cec-Chr2:3668260 Cec05g1693 Cec-Chr5:28125720 1.70E-252 dispersed
Cec02g1349 Cec-Chr2:30542560 Cec05g1693 Cec-Chr5:28125720 2.10E-174 dispersed
Cec02g2570 Cec-Chr2:42692250 Cec05g1693 Cec-Chr5:28125720 1.50E-184 dispersed
Cec02g2571 Cec-Chr2:42701818 Cec05g1693 Cec-Chr5:28125720 1.70E-152 dispersed
Cec04g1349 Cec-Chr4:33122283 Cec05g1693 Cec-Chr5:28125720 2.10E-193 dispersed
Cec05g1693 Cec-Chr5:28125720 Cec09g0770 Cec-Chr9:7047431 4.00E-153 dispersed
Cec05g1693 Cec-Chr5:28125720 Cec08g1440 Cec-Chr8:26176905 8.00E-279 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g137 Blo01g01619 . . . Bpe02g00325 . . Bma01g02394 Cmo05g00336 . Cma01g01997 Cma09g00072 Car01g01569 . . . . Bhi04g00090 . . . Hepe10g0675 . . Cla08g01388 Cam08g1861 Cec08g1440 Cco08g1572 Clacu08g1555 . Cre08g1339 . Cone7ag1919 Cone17ag1436 Cone20ag0046 Lsi04g01790 Csa04g02681 . Cme03g01548 Blo17g00723 Blo18g00757 Bda08g01183 . . Bpe05g00167 Bma01g00712 . Sed03g1664 Cmo01g02058 Cmo09g00073 . Cma05g00335 Car05g00279 . . . Bhi09g02935 Tan01g5072 . . Hepe01g2318 Mch11g0074 . Cla05g01582 Cam05g1690 Cec05g1693 Cco05g1740 Clacu05g1679 Cmu05g1570 Cre05g1687 Lsi08g01278 . Chy07g00372 Cme07g00076
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000048 7 10 7 9 7 11 7 11 13 11 8 10 14 9 12 16 10 16 4 10 12 10 16 10 14 12 11 19 23 4 333