Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1756 ATGAGATCAAGGAACAATGCAACAATTCTCTGCGTGTTGGCGCGATTAGGAAACGGTATAATTACAAACCGGCAAAAACGCAACAGTTCAGATTCGATAGCTCATTTCTTCGTCAGTGATTCTCCCGGGAGATTGTTGAAATTGAGCAGTGCCGACACCGGAAAAATGGCACCCCTTGTGCGAGTTGCCGGGAGTATTCTCGTCCGCGATCGACTTCTCACGGCGGTTATCGCCGGCGCCTCCAGTCTTTCGTTCGTGGGATCGGGATTTATAGTGCTCTGTTACGTCCTCTTCAAAGAACTTCGCAAGTTCTCCAACAAGCTCGTCTTCTATCTTGCCCTATCCGATATGCTTTGCAGTTTCTTCACTATGATAGGGGATCCAGCAACAGGATTTTACTGTTATACTCAGGGCTATAGCACTCATTTCTTTTGTGTGGCATCGTTCTTGTGGACAACAACAATTGCATTCACCCTTCACCGTACTGTTGTTAGACATAAAACCGACGTCGAAGATTTGGAGGCTATGTTTCACTTGTATGTATGGGGAACATCATTAGTGTTGACTGTTATACGTTCTATTGGTAATAACCATGGACATGTGGGTACCTGGTGTTGGGCACAGTCAAGTCGTACAGGAAAGGCTGTTCACTTTATAACATTTTACATGCCACTCTGGGGTGCAATTCTCTACAATGGTATTACTTACCTTCAAGTGATACGCATGCTTAATAATGCTACCCGTATGGCAGTTGGCATCTCAGATAGGGCTTACCAGTCAGATGCAAGAGCAGACATGAAGGCTGTAAACAGATGGGGATATTATCCGCTCATCCTTATAGGGTCATGGGCTTTTGGTACAATCAACCGTATCCATGATTTTATTGAACCAGGTCATAAAATCTTTTGGCTGTCGGTTCTTGATGTTGGGATGGCTTCTCTGATGGGCTTGTTCAATTCAATAGCATATGGTCTTAATTCTTCAGTGCGACGGGCAATTTATGAAAGAATAGACCTGTTTTGGCCTGAGAAGCTTCGAAGATGGCTCCCCAGCAATTCAAGGTTCCGAAACCAACAACAAGAAGGCGAACTGTGGTGGCGAATTGGGCGGTCGCTTCTCATTGCAGATAAGCATGTGGTGGAAGCTGCCGTTTCTTTTACAGATAAGCCATTTTCACTCTGA 1182 45.01 MRSRNNATILCVLARLGNGIITNRQKRNSSDSIAHFFVSDSPGRLLKLSSADTGKMAPLVRVAGSILVRDRLLTAVIAGASSLSFVGSGFIVLCYVLFKELRKFSNKLVFYLALSDMLCSFFTMIGDPATGFYCYTQGYSTHFFCVASFLWTTTIAFTLHRTVVRHKTDVEDLEAMFHLYVWGTSLVLTVIRSIGNNHGHVGTWCWAQSSRTGKAVHFITFYMPLWGAILYNGITYLQVIRMLNNATRMAVGISDRAYQSDARADMKAVNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLSVLDVGMASLMGLFNSIAYGLNSSVRRAIYERIDLFWPEKLRRWLPSNSRFRNQQQEGELWWRIGRSLLIADKHVVEAAVSFTDKPFSL 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29198734 29203815 + CePI673135_05g017560.1 Cec05g1756 203559

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1756 393 Gene3D - 70 350 - -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 226 249 IPR022340 -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 269 290 IPR022340 -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 106 128 IPR022340 -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 174 189 IPR022340 -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 317 333 IPR022340 -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 136 149 IPR022340 -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 213 225 IPR022340 -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 73 88 IPR022340 -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 90 104 IPR022340 -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 151 169 IPR022340 -
Cec05g1756 393 PRINTS Putative plant GPCR, GCR1, signature 299 316 IPR022340 -
Cec05g1756 393 SUPERFAMILY Family A G protein-coupled receptor-like 72 358 - -
Cec05g1756 393 PRINTS GCR1-cAMP receptor family signature 275 293 IPR022343 -
Cec05g1756 393 PRINTS GCR1-cAMP receptor family signature 307 326 IPR022343 -
Cec05g1756 393 PRINTS GCR1-cAMP receptor family signature 134 152 IPR022343 -
Cec05g1756 393 PRINTS GCR1-cAMP receptor family signature 84 102 IPR022343 -
Cec05g1756 393 PRINTS GCR1-cAMP receptor family signature 103 118 IPR022343 -
Cec05g1756 393 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 73 327 IPR017981 GO:0004888(InterPro)|GO:0007166(InterPro)|GO:0016020(InterPro)
Cec05g1756 393 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 71 337 - GO:0004930(PANTHER)|GO:0005886(PANTHER)|GO:0007189(PANTHER)
Cec05g1756 393 Pfam Slime mold cyclic AMP receptor 76 327 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1756 K22987 - - csv:101216480 613.994
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g174 Blo01g01438 . Bda01g00644 . . Bpe02g00515 . Bma01g02189 . . Cma01g01606 . Car09g00321 . . . Cpe06g00265 . . . . . . . Cla05g01637 Cam05g1746 Cec05g1756 Cco05g1812 Clacu05g1738 Cmu05g1623 Cre05g1750 Cone4ag1705 Cone7ag1621 . . Lsi04g01377 . . . . . . . . . . . Sed13g1922 Cmo01g01688 Cmo09g00373 Cma09g00372 . Car01g01310 . . Cpe02g00297 Bhi09g03068 Tan01g3494 Cmetu07g1418 . . . . . . . . . . . . . . Cme07g00168
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004383 1 3 1 1 1 1 3 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 0 1 1 1 2 6 1 42