Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1767 ATGGAATCGGAGGATTCAGTGAGATTAAGATTGGAGGAATTGCACAAAGATTTGGGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCATTATTTCTCTGCTTCAAGATCGCTATCCTACTGCTTCTCCTTCATTACGCAAATCGTTCTATTCCGTAATTTGTCGAGTTGCAACAGTATTGAAGACGAGGTTTACGGCCCCAGGGTTTTGGCTTTCTGGTCTCAAGCTTTTTCAGTTTTCTTTGACTTTGCTCTCTGATCATTCAGAGAGACAACACCTGGAGGCTTGCCTAGCTCAGGCCAAGGAAATTCTGCACCAAATCGATAATCCATCTCCTGCTTCACAAAGTAATTCATCAAATGGAGGCTATCTTTTTGAGGGCCATCTCACTGTTGATCCAGAGCCACCCCAGCCCCAGTGGCTGGTGCAGTCAAACCTCTTGACAGCCGCTGCAGCTGCCCTATCTAATGCTGAATCTTCTCAAGGTCCAGCTGAGAACAGCAACACTTCTGCAAATGCTGCTAATATTCTTCAAGCGCTTATTGAAAATCTAGATAACGCTGTAGATGGGTTCATGGACTTGGAAATGGCTAGCGGACCGCCAAGAGTCCCTCCTGCAAGTAAAGAAGTCGTTGCAAAACTTCCTGTAATTACGATAACTGATGAAGTTCTTGCCAAGCTAGGAAGAGATGTACAATGTGCTATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAACACACATTCCACCCACCTTGTTTGAAGCCCTGGCTGGATGAGCATAACTCTTGTCCGATTTGTCGACATGAATTGCCCACCGACGACCACAAATACGAGAGCTGGAAGGAGCGAGAGAAAGAGGCCGAAGAAGAAAGAAAAGGAGCTGCAAATGCTGTTCGTGATTTCTTCAAAAGCTGTAACGCCGGAATAGCATTCACAATATGGAAACATGTCTCACCTCCGCCGCCGGCGCCACCATTTTGTCGTCCTCTTCCGCCGTCTTTGGCCGCCGACGTCGATGGATTCTCATATCCAACAAAACTAACAGATGCAAATATACTCTCAAGAGAGGAATTGAAGATCGTTTTCCCCTTTTCAATGAATTTTCAGAGCGAACTGATTTACAACAGATTGGAATCTTGTTTGGTGATACCACCGCCTAGGGGTAAGCCACCTCGCGCTATCGTCCAGTTCCTCGGCGGCGCTTTCATCGGAGCTATTCCTGAAGTCACTTACGGCTACTTAATTGAGCTTTTGGCAAAGGAAGGGTTTCTGATAATCTCAGTACCTTACAATGTGACTTTCGATCATGCCGATGCTGCGAGACAAGTATTTGAGAGGTTTCATGCCTGTTTGGATACCATTGTAGCGTCCGGATTGCCCGATGAAGATATTTCACCTGCTCAACTCGTTAATCTTCCTCTATTTTCTGTGGGTCATAGCAATGGCGCGCTTCTGCAAGTACTCACAGGGAGCTATTTCTCTGAGAAGATACCTAAGGCTAATGCTATAATCTCCTTCAACAACAGGCCAGCAACAGAGGCTGTTCCTTACTTTGAGCAGTTGGGCCCTTTGACCAGTCAGATGATGCCTGTTGTACAAACATCTCCAGTTTACTCAATGGCGAGGAGTGTCTCAGGGGATGCATGGAAGATCTTGGTTGATGCTGCTGGAGCTATTGTTCCAGACAGAGATCAAGAAGTCTTGAATTCTCTGACCAATTTTGTTGATCAGTTGCCCTCAGTGTTTAACCAGGTGACAGAAGGGGTTTCGGAGTTCAGGCCAACTCCATCTGAGAATCGAGATTGCTTCAAGTGTAATTACAATGTCCAAAACACTCTCCTGGTGAAGTTCATTTCAGACACGATTGACGAGACCGATCTACTTGAACAGACACTGAAGACTCGCGTTGAATCTATTAATGGCACGCTCGAGAAGGTTGAGTTAAGTGGTAACCACATCACACCTTGTGTACAGGAACCAAAGTGGGAGGTAGGTTATTTGTACACTCCCGCAGATGCTCTTGCTCAGGCGCTTAAATCTCTATCTTTGAGAGAAACAAGAGAGCTTGCTAAAACCTTATGCAACTGGTTTGAACGTTTTGAAGCCTAA 2133 45.71 MESEDSVRLRLEELHKDLGKKQRFEEAVSTIISLLQDRYPTASPSLRKSFYSVICRVATVLKTRFTAPGFWLSGLKLFQFSLTLLSDHSERQHLEACLAQAKEILHQIDNPSPASQSNSSNGGYLFEGHLTVDPEPPQPQWLVQSNLLTAAAAALSNAESSQGPAENSNTSANAANILQALIENLDNAVDGFMDLEMASGPPRVPPASKEVVAKLPVITITDEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRDFFKSCNAGIAFTIWKHVSPPPPAPPFCRPLPPSLAADVDGFSYPTKLTDANILSREELKIVFPFSMNFQSELIYNRLESCLVIPPPRGKPPRAIVQFLGGAFIGAIPEVTYGYLIELLAKEGFLIISVPYNVTFDHADAARQVFERFHACLDTIVASGLPDEDISPAQLVNLPLFSVGHSNGALLQVLTGSYFSEKIPKANAIISFNNRPATEAVPYFEQLGPLTSQMMPVVQTSPVYSMARSVSGDAWKILVDAAGAIVPDRDQEVLNSLTNFVDQLPSVFNQVTEGVSEFRPTPSENRDCFKCNYNVQNTLLVKFISDTIDETDLLEQTLKTRVESINGTLEKVELSGNHITPCVQEPKWEVGYLYTPADALAQALKSLSLRETRELAKTLCNWFERFEA 710
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 29358727 29368572 - CePI673135_05g017670.1 Cec05g1767 203570
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1767 710 Coils Coil 285 305 - -
Cec05g1767 710 FunFam E3 ubiquitin-protein ligase RNF181 195 281 - -
Cec05g1767 710 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 197 281 IPR013083 -
Cec05g1767 710 Gene3D alpha/beta hydrolase 378 587 IPR029058 -
Cec05g1767 710 PANTHER OS04G0405600 PROTEIN 379 706 IPR010765 -
Cec05g1767 710 SUPERFAMILY RING/U-box 228 281 - -
Cec05g1767 710 CDD RING-H2_RNF126-like 233 275 - -
Cec05g1767 710 ProSiteProfiles Zinc finger RING-type profile. 234 275 IPR001841 -
Cec05g1767 710 SUPERFAMILY alpha/beta-Hydrolases 389 504 IPR029058 -
Cec05g1767 710 SMART ring_2 234 274 IPR001841 -
Cec05g1767 710 Pfam Ring finger domain 233 275 IPR001841 -
Cec05g1767 710 Pfam Protein of unknown function (DUF1350) 398 706 IPR010765 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1767 Cec-Chr5:29358727 Cec10g2133 Cec-Chr10:35904355 5.00E-18 dispersed
Cec05g1767 Cec-Chr5:29358727 Cec01g1573 Cec-Chr1:30316205 9.10E-20 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1767 - - - 0.0