Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1791 ATGCCCGCGCTTACAAGCTCTGGCGGCGCGCAAAGAGCTTTTCACTTCATCGGTCGACGGACAAAGCCATGGCTCGCCGCCATAGCCAAGCTCAACCGTCCTGTTGGAACCCAATTTCTCGTGCGATTGGTCTCTCTCGTGATTGATATGGGTATATACCTCAGCAATCCCAAAACAGAGAAGTCCTCTGAAGACGGTGAGAATAGACGGCTTAGATATGGACTATCGTCTATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCAGTTCCTGATCTGGATGCCTGCACTTCCTTCTTTGGTGTTTATGATGGCCATGGAGGTAAGGTGGTTGCAAAGTTCTGTGCCAAGTACCTACATCAGCAAGTGAAGAAAAATGACACTTTTGCGGCTGGAGATATAGGAACTTCTGTGCAGAAAGCATTCTTCAGAATGGATGAAATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTGTTTTGGGTGATAGATTGAACAAGTTCACTGGCATGATAGAAGGGTTAATCTGGTCCCCAAAAAGCAGTGATGCAAATGACCTGGCTGATGATTGGGCTTTTGAGGAGGGTCCACACTCTGATTTTACTGGCCCAACTTCCGGGTGTACAGCTTGTGTTGCAATTATTAGAAATAACAAACTAGTTGTTGCAAATGCTGGTGATTCTCGCTGTGTGCTATCAAGAAAGGGCCAGGCCCACAGTCTCTCTAGAGATCACAAGCCTGATCTTGAGGCTGAGAAGGATAGAATTCTGAAAGCTGGTGGTTTTATTCATGCTGGACGAGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGACATGGAATTTAAGCAGAATAAATTTTTACCTGCTGAAAAGCAAATTATTACTGCAAACCCTGATGTAACCACTGTCGAGCTTTGCGACGATGATGAGTTTATTGTGATAGCTTGTGATGGTATATGGGATTGCATGTCTAACCAGCAACTGGTAGATTTTATACATGAACAGCTAAAATCAGAAACTAAACTCTCTGTGGTTGTTGAGAGAGTACTTGATAGGTGTTTGGCACCTTCCACTGCTGGTGGTGAGGGATGTGATAACATGACCATGATTTTGGTGCAGTTTAAGAAAGATAATCAATCAAACTCCCCCATAGATGGCCAAACTTCACCTGCCGCCACTGCCTGTGCCGAACCAGACGGTACGGAATCGATGCAGAAAGATGAATTGAGCCACAGACTTTGA 1254 45.45 MPALTSSGGAQRAFHFIGRRTKPWLAAIAKLNRPVGTQFLVRLVSLVIDMGIYLSNPKTEKSSEDGENRRLRYGLSSMQGWRATMEDAHAAVPDLDACTSFFGVYDGHGGKVVAKFCAKYLHQQVKKNDTFAAGDIGTSVQKAFFRMDEMMRGQRGWRELAVLGDRLNKFTGMIEGLIWSPKSSDANDLADDWAFEEGPHSDFTGPTSGCTACVAIIRNNKLVVANAGDSRCVLSRKGQAHSLSRDHKPDLEAEKDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQQLVDFIHEQLKSETKLSVVVERVLDRCLAPSTAGGEGCDNMTMILVQFKKDNQSNSPIDGQTSPAATACAEPDGTESMQKDELSHRL 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29790386 29799164 - CePI673135_05g017910.1 Cec05g1791 203594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1791 417 SUPERFAMILY PP2C-like 52 379 IPR036457 -
Cec05g1791 417 CDD PP2Cc 72 378 IPR001932 -
Cec05g1791 417 Pfam Protein phosphatase 2C 72 153 IPR001932 -
Cec05g1791 417 Pfam Protein phosphatase 2C 204 362 IPR001932 -
Cec05g1791 417 ProSitePatterns PPM-type phosphatase domain signature. 101 109 IPR000222 GO:0043169(InterPro)
Cec05g1791 417 MobiDBLite consensus disorder prediction 383 417 - -
Cec05g1791 417 PANTHER PROTEIN PHOSPHATASE 2C 67 379 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cec05g1791 417 ProSiteProfiles PPM-type phosphatase domain profile. 72 378 IPR001932 -
Cec05g1791 417 SMART PP2C_4 62 376 IPR001932 -
Cec05g1791 417 Gene3D - 49 379 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1791 Cec-Chr5:29790386 Cec09g0335 Cec-Chr9:2781364 6.70E-140 dispersed
Cec05g1791 Cec-Chr5:29790386 Cec09g0479 Cec-Chr9:4063707 7.70E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1791 K17499 - csv:101211604 681.019