Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1792 ATGCAGGCAGATCAGACGGTGATAAGTTTGAGACCTGGTGGTGGCGGTGGCTTTCGTGGAAGCAGATTTGTTACACCTCGCTTCGATTCATCCTCCGCCGACTCTTCGTCGCTTCGTCCACATGGCGGCGCTGCTTCAATCCTCAAGACTGGCGATCTACGGTTTGAAGGTCGTGAGCGAATGCAATACACTCGAGACCAGCTTCTGCAGCTTAGGGAGGTTGCAACAGTCCCTGAGGATATCTTGAAAGTCAAACTAGAAGTTGAGTCAGAGATAGTTGGGGAAGATCAAACATGGGCCCGTGCTGAAAGCAATCAGCAATCACAATCTCAAGGCCGTTACTTTGAGGCAGACAATCGAGATTGGCGTGGTCGATCTGGACAGTTACCCGGCTCTACAGAGGAAGGATATTGGGAAGCAAATAAGGATTTGTCTGGACAATCTGAGTTGAGGTTCCAAGACTCAAATAATAGGAATCAAGTTTCTGGTAACCAAGGGGTTGGCACTGCACCTGCTCTCATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGATAAGGAACGAGTTTTGAAGACAGTTAAAGGTATACTGAATAAATTGACTCCAGAAAAGTTTGACATACTCAAAGGTCAACTGATTGACTCAGGAATTACATCCGCTGATATTTTGAAGGATGTTATATCGCTTATATTTGAGAAGGCCGTATTTGAGCCCACATTTTGCCCTATGTATGCACTTTTGTGCTCTGACCTCAATGAGAAGCTTCCTTCATTTCCATCCGAAGTGCCTGGAGAGAAAGATATCACTTTTAAACGTGTTCTCTTAAATATTTGCCAAGAGGCATTTGAAGGTGCTGATAACATGAGGGCAGAAATCAGGCAGATGACTAGTCCTGAGCAGGAAACGGAAAGAAGAGATAAAGAAAGAATGGTTAAGCTTCGAACTCTAGGAAACATTCGCCTGATAGGTGAGCTTCTGAAACAGAAGATGGTGCCTGAAAAGATTGTTCACCATATTGTTCTGGAGCTGTTGGGGCCTGACCCTAAAATATGCCCTGCAGAGGAGAATGTCGAGGCTATTAGTCAGTTTTTTAACACAATAGGTAAGCAACTGGATGAGAGCCCAAAATCTCGACGGGTCAATGATGTATATTTCAGCCGTTTGAAGGAGCTCACTGCAAACACCCAATTAGCACCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTGCGGGCCAATAACTGGGTTCCTAGACGTGAAGAGGTGAAAGCGAAAACCATCACTGAAATTCATTCAGAGGCTGAAAAGAATCTAGGGCTCCGTCCAGGTTCAATGGCAATGATGAGAAATGGCCGTAATACCGAGGCACTTGGGGGATTAAGTCCTGGTGGTTTTCCAGTTGCCCGACCTGGCTTTGGAGGTATGATGCCTGGAATGCCTGGAACCAGGAAAATGCCTGGGATGCCTGGACTTGAGTCAGACAATTGGGAAGTTCCTAGATCCCGAGCAATGCCAAGGGGTGAAACCGGAGGTCCTACTGCGCGCGGCCAGTCATCATTAATGGGCAAAACACCTTCCATTAATTCAAAATATTTACCTCAGGGAAGTGGAGGTGTAATAACAGGGAAAACAAGTGCCTTGCTACAGGGTAGTGCTGCTGCATCTCCTGCCCGACCACCGAGTTCCATGCCTGGAACTCAGCCTGTTTCTCACAACCCTAAACCAGTTGCTCCAGTTACACCTATCATATCTTCGCCTCCGAAGCCTGCAGCTCCTGCTGCATCCAATCTGGTTGATCTTCGCAAGAAAACCGTTTCGCTGCTTGAGGAATACTTCAGCGTACGGATTCTTGATGAAGCTCTACAGTGTGTAGAGGAGCTGAAATCCCCAGCTTATCACCCTGAGGTTGTTAAAGAATCTCTTACCATTGCACTTGAGAAGATTCCACCATGTGTAGACCCAGTTGTTAAGCTTCTTGAGCACTTGCTTCACAAGAATGTCTTGACTGCAAAGGATATAGGTACCGGGTGCCTTCGATATGGGTCAATGATGGATGATATCAGCATCGATCTACCAAAAGCACCAAACAATTTCGGTGAGATTCTCGGGAAGTTAATTTTGATCGGAGGTCTGGATTTTGCTGTTGTGAAGGAGATTCTTAAGAAGGTCGAAGATAACTACTTTCAAAAATCCATTTTTGGTGGTGCTATGAAGATCCTCAACTCTAGCCCTTCTGGAGAAGGAATTCTGGCAACTCAAATCGTTGAGATCCAGGCATGTGAGACTTTACTTGCGTGA 2313 45.87 MQADQTVISLRPGGGGGFRGSRFVTPRFDSSSADSSSLRPHGGAASILKTGDLRFEGRERMQYTRDQLLQLREVATVPEDILKVKLEVESEIVGEDQTWARAESNQQSQSQGRYFEADNRDWRGRSGQLPGSTEEGYWEANKDLSGQSELRFQDSNNRNQVSGNQGVGTAPALIKAEVPWSVRRGNISDKERVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKDVISLIFEKAVFEPTFCPMYALLCSDLNEKLPSFPSEVPGEKDITFKRVLLNICQEAFEGADNMRAEIRQMTSPEQETERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDPKICPAEENVEAISQFFNTIGKQLDESPKSRRVNDVYFSRLKELTANTQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGSMAMMRNGRNTEALGGLSPGGFPVARPGFGGMMPGMPGTRKMPGMPGLESDNWEVPRSRAMPRGETGGPTARGQSSLMGKTPSINSKYLPQGSGGVITGKTSALLQGSAAASPARPPSSMPGTQPVSHNPKPVAPVTPIISSPPKPAAPAASNLVDLRKKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKESLTIALEKIPPCVDPVVKLLEHLLHKNVLTAKDIGTGCLRYGSMMDDISIDLPKAPNNFGEILGKLILIGGLDFAVVKEILKKVEDNYFQKSIFGGAMKILNSSPSGEGILATQIVEIQACETLLA 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29808294 29813434 - CePI673135_05g017920.1 Cec05g1792 203595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1792 770 SMART if4_15 194 419 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cec05g1792 770 MobiDBLite consensus disorder prediction 99 115 - -
Cec05g1792 770 SUPERFAMILY ARM repeat 187 422 IPR016024 -
Cec05g1792 770 MobiDBLite consensus disorder prediction 555 577 - -
Cec05g1792 770 SMART ma3_7 605 717 IPR003891 -
Cec05g1792 770 FunFam Eukaryotic translation initiation factor isoform 4G-2 185 420 - -
Cec05g1792 770 Gene3D - 185 420 - -
Cec05g1792 770 Pfam MA3 domain 605 717 IPR003891 -
Cec05g1792 770 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 56 765 IPR045208 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0016281(PANTHER)
Cec05g1792 770 MobiDBLite consensus disorder prediction 1 44 - -
Cec05g1792 770 ProSiteProfiles MI domain profile. 604 726 IPR003891 -
Cec05g1792 770 MobiDBLite consensus disorder prediction 99 136 - -
Cec05g1792 770 MobiDBLite consensus disorder prediction 25 39 - -
Cec05g1792 770 SUPERFAMILY ARM repeat 601 757 IPR016024 -
Cec05g1792 770 Pfam MIF4G domain 194 419 IPR003890 GO:0003723(InterPro)|GO:0005515(InterPro)
Cec05g1792 770 MobiDBLite consensus disorder prediction 506 528 - -
Cec05g1792 770 Gene3D - 602 759 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1792 Cec-Chr5:29808294 Cec06g0873 Cec-Chr6:11147985 1.20E-46 dispersed
Cec05g1792 Cec-Chr5:29808294 Cec06g1438 Cec-Chr6:27861612 1.20E-280 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1792 K03260 - csv:101211356 1298.11