Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1807 ATGGCTTTATTTCGCAAATTCTTTTATCGGAAGCCACCGGACGGGCTTTTAGAGATATCCGAAAGGGTTTATGTTTTCGACTGTTGCTTTACAACGGAGGTTTTGGAAGAAGACGAATACAAGGTCTATATTGGAGGGATTGTTGGGCAACTTCGTGAGAGTCTCACTGACGCTTCATTCATGGTGTTCAATTTCCGAGAAGGGGAGAATCATAGCCTCGTTACTAATATATTATCTGTATATGATATGACTGTCATGGACTATCCTCGACATTATGAAGGCTGTCCTCTACTCACTATGGAGATGATCCACCACTTTTTAAGATCCAGTGAAAGCTGGCTCTCACTTGGCCAACAGAATGTACTTTTGATGCACTGTGAAAGAGGGGGGTGGCCAGTCTTGGCTTTCATGTTGGCCGCTCTTCTGATTTACAGGAAGCAGTATGCTGGGGAGCAGAAAACTTTGGACATGATTTACAAGCAAGCACCGCGGGAACTTTTGCAGTTGATGTCACCTCTTAATCCATTGCCTTCACAGTTGAGGTATCTTCAATATGTATCAAGAAGAAATGTGGCCTCAGAATGGCCTCCTCTTGACAGGGCTCTTACTCTAGACTGCATAATTATTAGATTTATTCCTAATATGGATGGGGAGGGTGGTTGCCGCCCAATATTTAGAATATACGGACAGGATCCCTTTATGGCTGCTGATCGAACTTCCAAAGTATTGTTCTCAACCCCCAAAAAGAGTAAACTTGTTCGGCAGTATAAGCAGGTAGATTGTGAACTAGTTAAAATTGATATCCATTGCCATATCCAAGGTGATGTTGTTCTTGAATGTATAAGTTTGGACAATGATCTGGAAAGGGAGGAGATGATGTTTCGAGTTATGTTTAACACAGCATTTATAAGGTCAAATATTTTAATGCTTAACCGTGATGACATTGATATTTTATGGCACGCAAAGGATCAATTTCCAAAGGATTTCAGAGCAGAGGTTCTTTTTTCAGAGATGGATGCTTCCGCATCACTTATTTCAGTTGAGTTGCCAAATATTGAGGAGAAAGATGGTCTTCCAATTGAAGCATTTGCTAGAGTTCAAGAGATCTTCAGCAATGTGGACTGGCTAAGCCCAAAGGCAGATGCAGCTCTTAATGTGCTTCAGAAAATAACAGCTTCAAATTTACTTCAAGAGAAACTGGTTAGTTCCGGCTCTTTAGATAGAAACCAGTTGCTCGACTTATCTGTTGAAAAACTAATCTTGGAATCAGAGACATCTGAAGACAATATTGGAAGTCCCCGATTGAAGATACAGACAAAAAAATCTCAGCCTTCTTCCGAACTATCTCAGGCTGCAGGTTCAGAGATATCAAAGATTGATCCCTCAGAATTGCAGGTTGCTCTCCAACTACCACCTCAGTCTAAAATCATCACCCAAAGAATACCTCAACCTTCATTGTCTACGCCAGCCTCCTTCCGTAGTTCTATGCAAGGTTCACCTCGCCCTATATTAAGATATCACAGTGCACCCTCAGCTCTTGGCATTACAGCTTTATTACAAGATCATTCCAATTTTAGTGGTAAAGAAGTCATACATCCAGCGACAATATCTTCACCATCATCTGCTTTCTTGAGTTCAAGTGGTCTAGATTCACTTAAAGATATTCAACCTTGTAAGCTTCCTATTTTGCCTCTCCCGCTAGCATTAGAGCCAAGATCTACATCAGAAAATTCTTCGACCACTGCGTCCACTTCAACCACTCCGGATCCATTGTCACTTCACCAACTTTCTTTGAAACCTATTAAATCTTCAATTTCTCAACCTCCTCAAGCCACATCACGGGTGAGAAGTCAATTATCACCGTCTTCATTACAACCAACTTCTACCTCTTTTCCTGAGGAGTCCCCACCCTCCTTCAATGAGAGCGAAGCTTTAAGAACCTCTTCCTCTTTAACTTCTCCGTCTTCTAGTAGGGAAAACAGTATTTTCCCATCCTCTCCACAACCTCCTTCTACAACACTACTGTTATCCTCTACAAAGACATCAATTCCATCTGTTCCTCAATTTTCTTCGTCTGATGATCGTCTAGTTTCTTCTCAGTCACCTAAAAAGAACTTGACGAGTGTCTCTCCTCCTCCTCCTCCTCCTCCATGTTGTAGCCCTAACTTGGGCGCTAGTGTTGCCTCGCCAACACCAGTGCCCCCACCCCCACCTCCACCTCCTTCATGGAAGGATGCTACAGACACATTCATGCTTGATCCCCCACCTCCACCTCCAGCCCCACCCTTGCCTCCATCTTCTTTCAGTTCAACATCTACTTGTGACTCTAGTATCACGCCTTTAGGGCCACCTCCACCACCACCTCCTCCTAGTCATGCACCACAAGATTTTGCCACTGTAGTTAGGAACTTGATGGCTGTATCTGGCCCTCCACCTCCCCCACCTCCCCCACCTCCCCCATCTCATTCTTCTCTAGATCCTAATACTGTATCTTCAGTACCGCCGCCGCCACCCCCTCCTAGTCTTGCACCAAATGTTTCTACAACAACTGTTAACTTGACACATGTCTCTGGCCCCCCTCCTCCTCCTCCACCACCTTTTGCAAATTCTGGTCCCACCTTATGTTCAGGTGCTGTAACGTCGGCTCCCCCTGCTCCGCCTCCTCCAGGTTTCTCAATGAAGGATTCTGCAACACATGCTCCACCTGCACCCCCTCCTCCAGGTCTCAGTGGTAATAAACTCTCAAATGTCAATGGTACTTCCTCACAGTCTCACGTTGGCATTAATAACAGCAACATACCTTCTGTTCCTGGACCACCTTCCAGCGCTCTATTCAATGCCAAGGGAAGGGGCCTTGGACGTTTGAACTCCAAAAACCAGTCTCAACCTAAAAGGTCCAATTTGAAGCCATATCATTGGTTAAAATTAACGAGGGCCATGCAAGGAAGCTTATGGGCAGAGACACAAAAGACTGATGAAGCTTCCAAAGCTCCGGAGTTTGACATGTCCGAACTTGAAAGTCTTTTCTCTGCAGCTGCACCAAATTCAGACTCTGGAGGTTCGGGTGGAAATTCAAATCGCCGAGCCTCAGGGCCAAAATCAGATAAAGTTCATTTGATTGAACTTCGACGGGCCTATAACTGTGAAATTATGCTTTCTAAAGTTAAGATTCCTTTGCCTGATATGATGTGTTCAGTCCTTGCATTGGATGATTCGGCATTAGATGTGGATCAGGTTGAGAACCTAATCAAGTTTTGTCCAACAAAGGAAGAAATGGAATTACTTAAGGGGTACAATGGGGATAAGGACAACTTGGGAAAATGTGAACAATTCTTTTTAGAGTTGATGAAAGTCCCACGAGTAGAGTCCAAGCTAAGGGTTTTTTCTTTCAAGATACAATTCCGATTGCAGGCCTCTGACCTTAGAAATAGTCTGAATACTATCAATTCGGCATCTGAAGAGATCAGAAGTTCGGTAAAGTTGAAAAGGGTAATGCAAACGATCCTTTCATTGGGTAATGCTTTGAACCACGGAACGGCCAGAGGTTCTGCTATTGGATTTCGACTTGATAGTCTCCTCAAACTCACTGATACACGAGCCAGAAACAATAAGATGACTCTCATGCATTATCTATGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTCTAGATTTTCCGAAGGATCTTGTTAGTTTGGAAGCTTCTACAAAGATACAACTGAAATACTTGGCAGAGGAAATGCAAGCCATAAGCAAAGGGCTTGAGAAAGTCGTTCAGGAATTGGCTAATTCAGAGAACGATGGGCTCGTTTCAGGAACTTTTTGCCGGACTTTAAAAGACTTTCTTTCTCATGCTGAGGCCGAAGTGAGGTCTCTTGCCTCTCTTTATTCTAATGTGGGTAGAAATGCTGATGCATTGGCTCTGTATTTCGGCGAAGATCCAGCACGTTGCCCTTTTGAGCAAGTTGTTTCTACACTGTTCAATTTCGTGAGGATGTTTATACGAGCGCATGAAGAAAACTGTAAGCAACTTGATTATGAAAAGAAGAAAGCACAGAAGGAAGCTGCAGAAAAGGAGAAGTTGAAACTCAATACCACAAAGGAGGAGTCAGGATTCTTGATGCAGACTCCAACCTAG 4137 43.68 MALFRKFFYRKPPDGLLEISERVYVFDCCFTTEVLEEDEYKVYIGGIVGQLRESLTDASFMVFNFREGENHSLVTNILSVYDMTVMDYPRHYEGCPLLTMEMIHHFLRSSESWLSLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYAGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVASEWPPLDRALTLDCIIIRFIPNMDGEGGCRPIFRIYGQDPFMAADRTSKVLFSTPKKSKLVRQYKQVDCELVKIDIHCHIQGDVVLECISLDNDLEREEMMFRVMFNTAFIRSNILMLNRDDIDILWHAKDQFPKDFRAEVLFSEMDASASLISVELPNIEEKDGLPIEAFARVQEIFSNVDWLSPKADAALNVLQKITASNLLQEKLVSSGSLDRNQLLDLSVEKLILESETSEDNIGSPRLKIQTKKSQPSSELSQAAGSEISKIDPSELQVALQLPPQSKIITQRIPQPSLSTPASFRSSMQGSPRPILRYHSAPSALGITALLQDHSNFSGKEVIHPATISSPSSAFLSSSGLDSLKDIQPCKLPILPLPLALEPRSTSENSSTTASTSTTPDPLSLHQLSLKPIKSSISQPPQATSRVRSQLSPSSLQPTSTSFPEESPPSFNESEALRTSSSLTSPSSSRENSIFPSSPQPPSTTLLLSSTKTSIPSVPQFSSSDDRLVSSQSPKKNLTSVSPPPPPPPCCSPNLGASVASPTPVPPPPPPPPSWKDATDTFMLDPPPPPPAPPLPPSSFSSTSTCDSSITPLGPPPPPPPPSHAPQDFATVVRNLMAVSGPPPPPPPPPPPSHSSLDPNTVSSVPPPPPPPSLAPNVSTTTVNLTHVSGPPPPPPPPFANSGPTLCSGAVTSAPPAPPPPGFSMKDSATHAPPAPPPPGLSGNKLSNVNGTSSQSHVGINNSNIPSVPGPPSSALFNAKGRGLGRLNSKNQSQPKRSNLKPYHWLKLTRAMQGSLWAETQKTDEASKAPEFDMSELESLFSAAAPNSDSGGSGGNSNRRASGPKSDKVHLIELRRAYNCEIMLSKVKIPLPDMMCSVLALDDSALDVDQVENLIKFCPTKEEMELLKGYNGDKDNLGKCEQFFLELMKVPRVESKLRVFSFKIQFRLQASDLRNSLNTINSASEEIRSSVKLKRVMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELANSENDGLVSGTFCRTLKDFLSHAEAEVRSLASLYSNVGRNADALALYFGEDPARCPFEQVVSTLFNFVRMFIRAHEENCKQLDYEKKKAQKEAAEKEKLKLNTTKEESGFLMQTPT 1378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29912873 29926073 + CePI673135_05g018070.1 Cec05g1807 203610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1807 1378 Gene3D Formin, FH2 domain 952 1344 IPR042201 -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 571 706 - -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 911 939 - -
Cec05g1807 1378 Pfam Formin Homology 2 Domain 960 1333 IPR015425 -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 1012 1030 - -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 953 967 - -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 569 973 - -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 751 766 - -
Cec05g1807 1378 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Cec05g1807 1378 Gene3D - 196 341 - -
Cec05g1807 1378 SUPERFAMILY Formin homology 2 domain (FH2 domain) 884 1353 - -
Cec05g1807 1378 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Cec05g1807 1378 Coils Coil 1334 1369 - -
Cec05g1807 1378 ProSiteProfiles Formin homology-2 (FH2) domain profile. 958 1359 IPR015425 -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 1012 1034 - -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 430 454 - -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 856 870 - -
Cec05g1807 1378 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 707 721 - -
Cec05g1807 1378 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 807 844 - -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 779 794 - -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 1355 1378 - -
Cec05g1807 1378 SMART it6_source 550 1378 IPR015425 -
Cec05g1807 1378 PANTHER FORMIN-J 1 1359 IPR051144 -
Cec05g1807 1378 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Cec05g1807 1378 SMART PTEN_C2_2 197 337 IPR014020 -
Cec05g1807 1378 MobiDBLite consensus disorder prediction 728 744 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1748 Cec-Chr1:32075253 Cec05g1807 Cec-Chr5:29912873 7.60E-251 dispersed
Cec05g1807 Cec-Chr5:29912873 Cec06g1796 Cec-Chr6:31425987 3.80E-264 dispersed
Cec07g0276 Cec-Chr7:2713591 Cec05g1807 Cec-Chr5:29912873 6.90E-263 transposed
Cec05g1807 Cec-Chr5:29912873 Cec06g1416 Cec-Chr6:27698588 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1807 K28090 - csv:101214019 2102.41