Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1819 ATGACGGTTGAATCTAGACTCGATGACCCAATTGACCAATTTCCCACTGGAATGCGTGTTCTCGCTGTTGACGACGATCCCACTTGTCTTTTGATCTTGGAGACTTTGCTTCGTCGTTGCCAGTATCATGTCACTACAACTAATCAGGCTATTATGGCACTCAAGTTGCTGAGGGAGAACAAGAACAAGTTTGATGTGGTTATCAGTGATGTTCACATGCCTGACATGGATGGATTTAAGCTGCTGGAGCTTGTTGGGCTGGAGATGGACCTGCCTGTTATTATGCTTTCTGCAAATGGAGATCCCAAACTTGTTATGAAAGGAATTACTCATGGAGCATGTGATTACTTGTTGAAACCTGTTCGCATTGAGGAGCTAAAGAACATTTGGCAGCATGTAATCAGAAGAAAGAAATTTGATCCAAAGGACCGAATGAATTCTGGCAATCTGGACAGGCCTGATTCTGAAAATGGCGAAGAAGCAGCAGATCCAAATGGGAAATTTAATAAAAAAAGGAAGGACCAGAACTATAACGAAGATGAGGACCAGGACTATGGGCAAGAGAATGATGACTCGTCGACCCAGAAGAAGCCTCGTGTTGTTTGGTCCGTGGAGCTGCATAGGAAGTTTGTAAATGCTGTCAACCAGTTAGGCATAGACAAGGCAGTGCCTAAAAAGATTTTGGACTTGATGAATGTCGAAAAGCTCACAAGAGAAAATGTAGCTAGCCATCTCCAGAAATACAGGCTTTATCTAAAGAGAATCAGCTGTGTGGCAAACCAGCAAGCTAACATGGTGACTGCATTGAGCAGCGCAGATCCTTCTTATTTGAGAATTGGTTCCCTTAGCGGAATTGGGAATTTCCATTCTTTGACTGGACCTCCACAGTTTCCTAACACTGCTTATAGATCTATCCCAACCACCGGGATGCTTGGTCGATTGAATTCTCCTGCTTGTATGGGTATGCATGGCCTTTCTTCCCCAGGAACAGTCCAACTCAGTAATTTGAACAATTCAAGCAATGATCAGACTACATTTCAGCCAATCATGCTTTCTGGAAACCATAGTGGGAATATTTTCCGGGGAATGCCTGAGCCATCGGAAATCGATCAACTACAACATGTTAAACATGGGACTCATGCGGATAGTCTCTCTTCTGCTTTTGATGAGAGAACAGTATTTCCTGCTTCCATTGGCCTCCCAAATGCAAACATGTCCTCCAGTACTCTAAGTAATCCTCTTTTAGGATTAACTAATGATCCCTTGATTTCAGAAGTCCAGCATCATGAAGTGAATGGTGGTAGAAAATTTGGAACTCCATCTTCCATTTCGGTAGTATCTTCAAATTCAGATAGCTCACGTCCTTCACTAGATAATGTTAGATGCACCGGCGACAATTGGTCGAACGCTGTTCATTCATCTAGGGTGCACTTGAATACAATTCCATCGAGCAACCTTTCTAATGTTGCTACTTCCTACCATAGTCAGTTGAGAGACAATACTACCAGTGCATTGCATATAGGAAATTGTCTTTCTGACATTTCTTCTATTACTTCAATATCTACTCAGTCCCATGATTCAAGAATAGATTCTCAACGTCAAGCAGCCACAACTAGCAACAGGTTTGATCAAATGATCTCAAAGGTTCCTGTTCAAGATTGGAATGATCATAAAGAGGATTCCTATTACCACACAACTATGGCCTGTAGCTCATCAAATTCTTTGATACCAGTGAATGGTGCTGCAGAGACTTTGCCCAAGCGCTTGGAAAATCAGAACATAATCTTCTCCAGCAGCAAGGATTTTAATGTGACTAGTCAAGCAAATGTTCTTGATCATGCAATGGTGGAACATGATCAATTCAAGAAATCAACCATGGAGACATCACTCATGTTGAAACAAGGGTACCTGTATGATCATCAGCAAAAGATGCAATCTAGACTATCACCAAGTAACTGCGGCTCCTTGGAAGACATAGCATGTGCGATGATGAAACAGGAACAAGATGATGGAAAATTATTGGAAGGAGACTTTGGATGTGATAATTATCCCATCGGAACATGCATGTTTAGCTCTCTGACCATGTTCTTATTTAGCTTCCTACATAGTCTGTTTTTCTGTTTGACAGGGCAGAAATACAAAAGGAAGCCTCTGTTTCATTTTGATTTCATGACTGTTATTACTATTGATGTTGGCCAACAATTGTACATTGTAATTCATATGGGTAATGATTTTGCATCAGTACACTACGTGTGA 2256 41.45 MTVESRLDDPIDQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAIMALKLLRENKNKFDVVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDPKDRMNSGNLDRPDSENGEEAADPNGKFNKKRKDQNYNEDEDQDYGQENDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLSGIGNFHSLTGPPQFPNTAYRSIPTTGMLGRLNSPACMGMHGLSSPGTVQLSNLNNSSNDQTTFQPIMLSGNHSGNIFRGMPEPSEIDQLQHVKHGTHADSLSSAFDERTVFPASIGLPNANMSSSTLSNPLLGLTNDPLISEVQHHEVNGGRKFGTPSSISVVSSNSDSSRPSLDNVRCTGDNWSNAVHSSRVHLNTIPSSNLSNVATSYHSQLRDNTTSALHIGNCLSDISSITSISTQSHDSRIDSQRQAATTSNRFDQMISKVPVQDWNDHKEDSYYHTTMACSSSNSLIPVNGAAETLPKRLENQNIIFSSSKDFNVTSQANVLDHAMVEHDQFKKSTMETSLMLKQGYLYDHQQKMQSRLSPSNCGSLEDIACAMMKQEQDDGKLLEGDFGCDNYPIGTCMFSSLTMFLFSFLHSLFFCLTGQKYKRKPLFHFDFMTVITIDVGQQLYIVIHMGNDFASVHYV 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30140620 30145259 - CePI673135_05g018190.1 Cec05g1819 203622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1819 751 SMART REC_2 18 130 IPR001789 GO:0000160(InterPro)
Cec05g1819 751 Gene3D - 17 148 - -
Cec05g1819 751 PIRSF RR_ARR_type-B 1 689 IPR017053 GO:0003677(InterPro)|GO:0003700(InterPro)|GO:0009736(InterPro)
Cec05g1819 751 MobiDBLite consensus disorder prediction 141 180 - -
Cec05g1819 751 SUPERFAMILY CheY-like 16 144 IPR011006 -
Cec05g1819 751 Pfam Myb-like DNA-binding domain 199 249 IPR001005 -
Cec05g1819 751 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160(InterPro)
Cec05g1819 751 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 194 253 IPR017930 -
Cec05g1819 751 SUPERFAMILY Homeodomain-like 194 254 IPR009057 -
Cec05g1819 751 Gene3D - 193 256 - -
Cec05g1819 751 CDD REC_typeB_ARR-like 20 134 - -
Cec05g1819 751 MobiDBLite consensus disorder prediction 141 196 - -
Cec05g1819 751 MobiDBLite consensus disorder prediction 437 457 - -
Cec05g1819 751 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160(InterPro)
Cec05g1819 751 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 374 IPR045279 GO:0009736(InterPro)
Cec05g1819 751 NCBIfam myb-like DNA-binding domain, SHAQKYF class 197 250 IPR006447 GO:0003677(InterPro)
Cec05g1819 751 MobiDBLite consensus disorder prediction 432 457 - -
Cec05g1819 751 FunFam Two-component response regulator 18 176 - -
Cec05g1819 751 FunFam Two-component response regulator 193 256 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0597 Cec-Chr1:6330778 Cec05g1819 Cec-Chr5:30140620 1.10E-19 dispersed
Cec03g0127 Cec-Chr3:1227256 Cec05g1819 Cec-Chr5:30140620 6.60E-21 dispersed
Cec04g1013 Cec-Chr4:29723345 Cec05g1819 Cec-Chr5:30140620 5.10E-16 dispersed
Cec05g0752 Cec-Chr5:6209066 Cec05g1819 Cec-Chr5:30140620 6.60E-89 dispersed
Cec05g1819 Cec-Chr5:30140620 Cec11g0360 Cec-Chr11:3814227 3.40E-110 dispersed
Cec05g1819 Cec-Chr5:30140620 Cec06g1400 Cec-Chr6:27465332 3.50E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29604 PF00072 Response_reg 1.00E-22 CL0304 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1819 K14491 - csv:101215220 1286.94