Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g1862 | ATGCCCCCAAGACCAGGTCGTAGGTCATTTGAGTGTGTAAGGAGAGCTTGGCATAGTGAAAGGCATCAACCCATTAGAGGTTCTCTTATTCAAGAGATTTTCAGGGTTGTTAGTGAAGTTCATTGCTGTGCCACTAAGAAGAATAAGGAGTGGCAAGAGAAGCTCCCCATTGTTGTTCTTAAAACTGAAGAGATTTTGTATTCTAAAGCTGACTCTGAGGCTGAATACATGGATATTACTACACTGTGGGCCCGAATAAATGAAGCGATTAATACGATAATTCGGCTTGATAAGGACGCCGAAACTGGGGAGTTTCTTCATCCTTGTATTGAAGCTGCTCTCCATTTGGGTTGCACGTCGAGAAGATCGTCGAAGAGTAACCAAGTATGCTTTGCAAGCACTAGGAGTTTTGGGAAAATCTCTCCAGGGTTTCAAGGCTCTCAAATGAACTGGATTGATAACAATGGCTTGTTTCTTATGTCCAATAATTCTAAATTTGGATTTGGGTTTGTGACTACTCAAGATGTGACAATGTTTTTGCTAGCTATCATCCACACAAGCAGTTTAAGAGTAGTTTGGTCTGCAAATAGGGCCTTCCCCGTTGCTAATTCTGATGAGTTTACATTTGATGAGAAGGGAAATGCAATGTTGAAGAAAGGTTCTGCTGTTGTTTGGTCTACAAATTCCAGTGATAAAGGGGTTTCTGCCTTGGAGTTGCAAAACTCGGGAAATTTGGTTTTACGAGCGAATGATAGCAACGGTGGAATAGTTTGGCAGAGTTTTAGCCATCCAACTGATACTCTTTTATCAGGGCAGGATTTTGTTGAAGGAATGAGACTTGTGAGTGATCTTAGCAATAATAACTTGAGCTATTACCTTCACATGAAGTCTGGTGATATGACTCTCTCAGCAGGCTTCCAATCCCCACAGACTTACTGGTCTATGGCTAAGGAGAATCGTAAAACCGTTAATAAAAACGGCGGGGCAGTCTCCTCAGCGACTCTTGATGCGAATTCTTGGAAGTTCTACGATCGAAGCAAAGTCTTGCTATGGCAATTCATCTTCTCGAATAAAGCCAATGAAAATGCTACTTGGATAGCAGTTTTAGGAGATGATGGTTTCGTGTCTTTTTATAATCTTCAAGATTCTAGTGTGGCTTCGACTACTAGGATACCTGAAGACTCTTGTAGCACACCGGAGCCGTGTGGCCCGTATTTTATATGTTATAGTGAGAATCGATGTCAATGCCCTTCAGTTCTTAGCACAAATTCGAATTGCCAACCTGGGATTGTCTCTCCTTGTGATCAATCGAATGGAAGTATAGAGCTTGTAAATGCAGGGACTGGGGTCAAATATTTTGCACTTGGATTCCTACCATCCGCCTCAACGACTGATTTAAATGGTTGCAAAAACTCTTGCATGAGCAACTGTTCTTGCCGTGCATTGTTCTTCGAAAGCCGAACAGGGAACTGCTTCTTGTTGGATGATGTAGGTAGCTTTCAAAACTCCAATGAGGACACGGACTTTGTCTCATACATTAAGGTCTTGAACAACGGAGGCGATGGCGACAACAATGGTGGGAGTAGAAATGGTGGAATGAACTCTCATATTGTTGCGATCATCATTGTTTTTACCATGTTCATCATTTGTGGTCTAGTTTATTTGGCATTTCGTTACTACAGGAAAAAGAAAAAACTGCCAGGAACTCCACAAGAGACTTCCGAGGATGATAACTTCTTGGATGGTTTGACAGGGGCGCCCATTCGTTATAGTTACGACGAACTTCAAACTGCAACCAATAATTTCTCTATAAAGCTTGGTCAAGGAGGATTTGGCTCAGTATATCAAGGAGTTCTACCTGATGGAACTCAGGTTGCTGTGAAGAAATTGGAAGCAACCGGTCAGGGGAAGAAGGAGTTTCGAGCTGAAGTGAGCATAATTGGTAGTATCCATCATGTTCACTTGGTCAGGCTCAAGGGCTATTGTGCCGAAGGATCACACAAGCTTCTTGCTTATGAATACATGGGAAATGGGTCTTTGGACAAATGGATATTTAGGAAGAATAAAGAAGATTTTTTGTTAGATTGGAATACAAGATTCAATATTGCATTAGGAACAGCTAAAGGACTAGCTTACCTCCATGAAGATTGTGATGTAAAGATTATTCATTGTGACATCAAACCCGAAAATGTGCTTCTCGACGAAAAGTTCCTTGCAAAAGTATCAGACTTCGGCCTTGCGAAGCTAATGACACGCGAGCAGAGCCATGTCTTTACGACACTAAGAGGAACTCGAGGGTATCTTGCACCAGAGTGGATCACAAACTATGCCATTTCAGAGAAGAGTGACGTGTATAGCTACGGGATGGTGTTGCTCGAGATAATTGGAGGAAGAAAAAACTTTGACTCAACAGAAACTACAGAAAAATGCCACTTCCCATCCTATGCTTTTAAAATGATGGAAGAAGGAAGACTCGAAAACATCATTGACTCGAATTTGGTAGTAAACGATGGTGATGAGAGAGTTTCTACAGCCATTAAAGTTGCATTGTGGTGCATACAAGAAGATATGCACCTTAGGCCACCAATGACTAGAGTAGTCCAAATGCTCGAAGGCCTTTGTGCCGTTCCTCCGCCTCCAACTTCCTCCCTGCTCGGTTCTCGCTTATTTTCAAGTTTCTTCAAATCAATCAGTGAGGGAGGAACCTCTTCCGGACCATCGGACTGCAACAGCGATGCGTATCTTTCGGCCATGAAGCTCTCCGGGCCAAGATGA | 2775 | 42.49 | MPPRPGRRSFECVRRAWHSERHQPIRGSLIQEIFRVVSEVHCCATKKNKEWQEKLPIVVLKTEEILYSKADSEAEYMDITTLWARINEAINTIIRLDKDAETGEFLHPCIEAALHLGCTSRRSSKSNQVCFASTRSFGKISPGFQGSQMNWIDNNGLFLMSNNSKFGFGFVTTQDVTMFLLAIIHTSSLRVVWSANRAFPVANSDEFTFDEKGNAMLKKGSAVVWSTNSSDKGVSALELQNSGNLVLRANDSNGGIVWQSFSHPTDTLLSGQDFVEGMRLVSDLSNNNLSYYLHMKSGDMTLSAGFQSPQTYWSMAKENRKTVNKNGGAVSSATLDANSWKFYDRSKVLLWQFIFSNKANENATWIAVLGDDGFVSFYNLQDSSVASTTRIPEDSCSTPEPCGPYFICYSENRCQCPSVLSTNSNCQPGIVSPCDQSNGSIELVNAGTGVKYFALGFLPSASTTDLNGCKNSCMSNCSCRALFFESRTGNCFLLDDVGSFQNSNEDTDFVSYIKVLNNGGDGDNNGGSRNGGMNSHIVAIIIVFTMFIICGLVYLAFRYYRKKKKLPGTPQETSEDDNFLDGLTGAPIRYSYDELQTATNNFSIKLGQGGFGSVYQGVLPDGTQVAVKKLEATGQGKKEFRAEVSIIGSIHHVHLVRLKGYCAEGSHKLLAYEYMGNGSLDKWIFRKNKEDFLLDWNTRFNIALGTAKGLAYLHEDCDVKIIHCDIKPENVLLDEKFLAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDSTETTEKCHFPSYAFKMMEEGRLENIIDSNLVVNDGDERVSTAIKVALWCIQEDMHLRPPMTRVVQMLEGLCAVPPPPTSSLLGSRLFSSFFKSISEGGTSSGPSDCNSDAYLSAMKLSGPR | 924 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 30685855 | 30695290 | + | CePI673135_05g018620.1 | Cec05g1862 | 203665 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g1862 | 924 | ProSiteProfiles | Protein kinase domain profile. | 600 | 873 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1862 | 924 | SUPERFAMILY | Protein kinase-like (PK-like) | 584 | 871 | IPR011009 | - | |
Cec05g1862 | 924 | SMART | blect_4 | 150 | 264 | IPR001480 | - | |
Cec05g1862 | 924 | Gene3D | - | 150 | 263 | IPR036426 | - | |
Cec05g1862 | 924 | ProSitePatterns | Protein kinases ATP-binding region signature. | 606 | 629 | IPR017441 | GO:0005524(InterPro) | |
Cec05g1862 | 924 | PIRSF | SRK | 124 | 919 | IPR024171 | GO:0004674(InterPro) | |
Cec05g1862 | 924 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 134 | 882 | IPR051343 | - | |
Cec05g1862 | 924 | CDD | PAN_AP_plant | 434 | 515 | - | - | |
Cec05g1862 | 924 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 189 | 315 | IPR036426 | - | |
Cec05g1862 | 924 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 721 | 733 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g1862 | 924 | Pfam | Protein kinase domain | 605 | 868 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1862 | 924 | CDD | B_lectin | 152 | 264 | IPR001480 | - | |
Cec05g1862 | 924 | Gene3D | Phosphorylase Kinase; domain 1 | 570 | 674 | - | - | |
Cec05g1862 | 924 | ProSiteProfiles | Bulb-type lectin domain profile. | 144 | 260 | IPR001480 | - | |
Cec05g1862 | 924 | ProSiteProfiles | PAN/Apple domain profile. | 434 | 517 | IPR003609 | - | |
Cec05g1862 | 924 | Pfam | D-mannose binding lectin | 191 | 274 | IPR001480 | - | |
Cec05g1862 | 924 | FunFam | S-receptor-like kinase 5 | 675 | 879 | - | - | |
Cec05g1862 | 924 | CDD | STKc_IRAK | 606 | 873 | - | - | |
Cec05g1862 | 924 | Gene3D | Transferase(Phosphotransferase) domain 1 | 675 | 874 | - | - | |
Cec05g1862 | 924 | SMART | serkin_6 | 600 | 870 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1862 | 924 | FunFam | serine/threonine-protein kinase PBS1-like | 569 | 674 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g1862 | Cec-Chr5:30685855 | Cec07g1382 | Cec-Chr7:29419312 | 3.00E-209 | dispersed | |
Cec05g1926 | Cec-Chr5:31318978 | Cec05g1862 | Cec-Chr5:30685855 | 4.20E-40 | dispersed | |
Cec08g1379 | Cec-Chr8:25663762 | Cec05g1862 | Cec-Chr5:30685855 | 2.90E-21 | dispersed | |
Cec08g0901 | Cec-Chr8:20821685 | Cec05g1862 | Cec-Chr5:30685855 | 4.60E-111 | transposed | |
Cec11g0326 | Cec-Chr11:3499279 | Cec05g1862 | Cec-Chr5:30685855 | 4.30E-29 | wgd | |
Cec05g1862 | Cec-Chr5:30685855 | Cec08g1377 | Cec-Chr8:25649734 | 0.00E+00 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72021 | PF00069 | Pkinase | 3.90E-51 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g1862 | - | - | - | 0.0 |