Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1932 ATGAAAGTCCAAACTTTTCTTTTTCTTCTTCTTTCAACTTGCTGTTTTGCTCAGCTTCACCTCAACTATTACCATAATTCATGTCCAAATGTTGAGTCCATTGTAAGAGATGCAGTGAACCAAAAATTTCAACAAACTTTTGTCACTGCCCCTGCCACTCTAAGGCTCTTCTTTCATGATTGTTTTGTCAGGGGTTGTGATGCTTCTGTGTTGATTCAAACAAACAACCATACTTCAGAGAAAGATAATGCAGAGAATCTTTCACTCGCCGGAGACGGGTTCGACACCGTGATCAAAGCTAAAGCTGCTGTCGATAGCGTGCCGGGATGTAAGAATAAGGTCTCTTGTGCTGACATATTGGCTTTGGCTACTAGAGATGTTGTAGCTTTGACAGGAGGACCGTCGTATGCCGTCGAGTTGGGAAGACGAGACGGGCGGATCTCGACGAGAAAGAGCGTTCGACATCATCTTCCTCAGCCTGATTTTGGATTAAATCAACTCAATGCCATGTTTGCAAAACATGGTCTAACTCAAACAGACATGATTGCTCTCTCAGGTGCACATACAATTGGATTCTCACATTGCAAGCATTTCTCCAAAAGGCTATATAGTTTCCACAGCAAAAACAGAATCGACCCGACGTTCAATCCAACGTACGTTGATGAGCTCAAGAAGGAATGCCCGAGAAATGTCGACCAGAGAATCGCGGTCGACATGGACTCGACGTCGTCGTTCACATTCGACAACATGTACTTCAAGAATCTACAAATGGGAAAAGGACTATTCACCTCAGACCAAGTATTGTTCACTGATCCAAGATCAAGAAAAACAGTGAACTTATTTGCTTCCAACAATACAGCTTTTGAGGAGGCTTTTGTAGTTGCAATGACAAAGCTTGGGAGAGTTGGAGTCAAAACAAGAAACCAAGGGGAGATTAGAGTAGACTGTTCATCAGTGAACTGA 963 42.99 MKVQTFLFLLLSTCCFAQLHLNYYHNSCPNVESIVRDAVNQKFQQTFVTAPATLRLFFHDCFVRGCDASVLIQTNNHTSEKDNAENLSLAGDGFDTVIKAKAAVDSVPGCKNKVSCADILALATRDVVALTGGPSYAVELGRRDGRISTRKSVRHHLPQPDFGLNQLNAMFAKHGLTQTDMIALSGAHTIGFSHCKHFSKRLYSFHSKNRIDPTFNPTYVDELKKECPRNVDQRIAVDMDSTSSFTFDNMYFKNLQMGKGLFTSDQVLFTDPRSRKTVNLFASNNTAFEEAFVVAMTKLGRVGVKTRNQGEIRVDCSSVN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31392897 31394273 - CePI673135_05g019320.1 Cec05g1932 203735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1932 320 Gene3D Peroxidase, domain 2 158 299 - -
Cec05g1932 320 Pfam Peroxidase 35 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 ProSiteProfiles Plant heme peroxidase family profile. 18 320 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 SUPERFAMILY Heme-dependent peroxidases 18 320 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601(InterPro)
Cec05g1932 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cec05g1932 320 Gene3D - 22 320 - -
Cec05g1932 320 PANTHER - 8 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 FunFam Peroxidase 158 299 - -
Cec05g1932 320 FunFam Peroxidase 22 166 - -
Cec05g1932 320 CDD secretory_peroxidase 18 319 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec05g1932 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec05g1932 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1932 Cec-Chr5:31392897 Cec11g0732 Cec-Chr11:8274707 3.90E-103 dispersed
Cec05g1932 Cec-Chr5:31392897 Cec01g1491 Cec-Chr1:29556387 3.30E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1932 K00430 - csv:101218982 616.305