Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g1963 | ATGTCGAAAATGAAACATCTTCTTCGAAAGCTTCACATCGGTGGCGGAATTAATGAACACCAGCGATTGAGCGATGCCCGACCTGTTACACGACCCAGTTCGAGCCCCAGTCCAGGCCCAAGCCCCAATAGTAATCCATCTGGTTCGTCGTCTTCTGGGTCTTCCTCGTCTTTGTCTATGGCGTCTTCCACTACAATGGGGAGATTGGAGGCTGTTGAATCCGTCGTTGATCCGGCGGCTCCTGGGGATGTCGTGGGCGGTGGGTGCGTGGATTTCAATGCCTTGGAAGAGGAGTTTCAGGTGCAATTGGCTATGGCGATTAGTGCTTCCGATCCTGATTCCAGACAAGACACTGAATCCGCTCAGATCGATGCTGCTAAGCGGATGAGTCTTGGCTGTTCGCCTACAGTCTCCGGCAGTAAAGCCCTCGCCGAATTTCTCTCCCTTCAGTATTGGAGCTATAATGTTGTAAATTATGATGAAAAAGTGATGGATGGATTTTATGACTTATATGGCATTACTGCAAACTCTAGCACTCGAGGAAAGATGCCACTGTTAGTTGATCTTAAAGAAATATGTGTGACAAGTGATATTGATTATGAAGTGATTTTGGTTAACCGCTTGCTTGATCCTGAGCTTCAACAGTTGGAGAGACAAGCATATAACATATTCATGGAATGCAGAGTTTCTGAATATGGCTTCATTTTAAGTGGTCTGGTTCAAAAAATTGCTGATATCGTTGTTGCTAGAATGGGTGGTCCTGTTGGTGATGCTGAAGAAATGTTGAGAAGGTGGACCCGCAGGAGTTATGAGATGCGTAGTTCCCTGAACACTATTATTCTACCACTTGGACGTCTAGATATTGGACTTGCACGTCATAGAGCCTTGCTTTTTAAGGTACTAGCTGATAGGATTAATCTTCCATGCATACTTGTCAAAGGAAGCTACTACACTGGTACTGATGACGGAGCTGTGAACATGATCAAAATTGATAATGGAAGTGAATATATTATTGATCTTATGGGTGCTCCAGGCACGCTAATTCCCTCAGAGGCACCCAGCTGTCAATTTTCGAATTATGGCTTTGATAGGAGGCCCGCAGATGTTATAGAAGTTCCTGAAGATACGCCAGTATTACAAAATGAAGAAGCTGAATCAGTATCAATTTCATCTACTCAAGATGGAGTAGCAAATGTTTGCAACTTAATATCCAAAGAAGCTTCAGATTTAGATGCTCAATCAAAAGAAAACGTTAGGAACTTTATTGAAGAAATTCAAACTGGGAGTCCTGATTATGATTTTACGAAGCTTCTAGAATCAGAAAACAGTGTGTATGATAGTTCATTGGGTGCATGTGCACAGTCCACATCTGCACAGAAGAAGAAAGTGAAAAAAGTGTCAAAGTATGTCATTAGTGCTGCAAAAAACCCAGAGTTCGCTCAGAAATTACATGCTGTCTTGTTAGAGAGTGGTGCATCACCTCCTGCAGATTTGTTTTCAGATATAGACTCACAGGATAATGGTGAAAGCAAAGCGACTTTTCAAATGTATCCAATCAACGGAAAGGGCATTGATGTTGGTCTTCATAGTCACCCCTATAGTTTAGCAAACCATGGACAGTCTTCTGCTACTTCTACCAAAACAGAGTATTTAAACAATGCTGTCCGTGAAAATAAGCAGAAAGTGTCTGCCGAGGGATCATCTGAAGAACAAATGCCTGATATAAATGCAAACAAGCACAGTATTTTTTGGCCTCACAGTATGAAAAACGAGGGCTTTGTGTTTGTTGATGCTAATGGGGAAACAGGAAAATTGGTCGATGTTAATGGAACTTTTCATCGTGAACATGTGGATGGTGTTTCATTGACATCTGATACCGACTCTCATAAAAGACTAGGAACTGCCTTAGTGAGTGAAGAAAGAAGATTGTTACAAGATACTAGTGGTGGAAATCTTCAGTGCTTTGATTTGCGTGAAAATCCGCATGAAAATTTGTTAGAAATTGATAATAGTAAACTGCATGCTAGTGATGACCACAGTGAGACAATTAACCCAATATTAGGTGAAGTTGCAGAATGGGAAATTCCTTGGGAGGATCTCCACATTGGTGAACGTATTGGTATTGGGTCATATGGTGAGGTTTATCGAGCAGACTGGAATGGCACTGAAGTTGCTGTGAAGAAGTTCTTGGATCAAGATTTTTCCGGTGCTGCTTTGGTTCAATTAAAATGTGAAGTTGAAATCATGTTAAGGCTGAGGCATCCTAATGTTGTTCTTTTTATGGGAGCGGTCACTCGCCCTCCTCATTTCTCTATCCTTACCGAGTTTCTTCCCAGGGGAAGTTTGTATAGGTTACTGCATCGTCCCAACTCTCAACTAGATGAAAGGAGACGATTGAAAATGGCTCTTGATGTGGCCAAAGGAATGAACTACTTGCACACAAGTCATCCGACCATAGTTCATAGAGATCTGAAGTCTCCCAATCTCCTTGTTGATAAAAACTGGGTTGTAAAGGTTTGTGATTTTGGTTTGTCACGTGTCAAGCAGAATACATTTCTGTCTTCGAAGTCAACTGCTGGAACGCCTGAATGGATGGCACCAGAAGTTCTAAGGAACGAACCAGCCAATGAAAAGTGTGATGTGTATAGTTTTGGTGTGATATTGTGGGAGTTAACGACTTGCCGGATACCATGGAAAGGTTTGAATCCAATGCAGGTTGTAGGAGCTGTTGGATTCCAGAATAGACGCCTGGAGATTCCAGAAGATGTTGATCCAGCAGTTGCACAGATCATTTGCGATTGTTGGCAAAAGGACTCGCAATTGAGGCCGTCATTCTCTCAGCTTATTACTCGATTGCGGCGCCTTCAACGGCTTGTTCGGAAAACATGCTCCGTGAATCAAATATCGGAGTGA | 2913 | 42.46 | MSKMKHLLRKLHIGGGINEHQRLSDARPVTRPSSSPSPGPSPNSNPSGSSSSGSSSSLSMASSTTMGRLEAVESVVDPAAPGDVVGGGCVDFNALEEEFQVQLAMAISASDPDSRQDTESAQIDAAKRMSLGCSPTVSGSKALAEFLSLQYWSYNVVNYDEKVMDGFYDLYGITANSSTRGKMPLLVDLKEICVTSDIDYEVILVNRLLDPELQQLERQAYNIFMECRVSEYGFILSGLVQKIADIVVARMGGPVGDAEEMLRRWTRRSYEMRSSLNTIILPLGRLDIGLARHRALLFKVLADRINLPCILVKGSYYTGTDDGAVNMIKIDNGSEYIIDLMGAPGTLIPSEAPSCQFSNYGFDRRPADVIEVPEDTPVLQNEEAESVSISSTQDGVANVCNLISKEASDLDAQSKENVRNFIEEIQTGSPDYDFTKLLESENSVYDSSLGACAQSTSAQKKKVKKVSKYVISAAKNPEFAQKLHAVLLESGASPPADLFSDIDSQDNGESKATFQMYPINGKGIDVGLHSHPYSLANHGQSSATSTKTEYLNNAVRENKQKVSAEGSSEEQMPDINANKHSIFWPHSMKNEGFVFVDANGETGKLVDVNGTFHREHVDGVSLTSDTDSHKRLGTALVSEERRLLQDTSGGNLQCFDLRENPHENLLEIDNSKLHASDDHSETINPILGEVAEWEIPWEDLHIGERIGIGSYGEVYRADWNGTEVAVKKFLDQDFSGAALVQLKCEVEIMLRLRHPNVVLFMGAVTRPPHFSILTEFLPRGSLYRLLHRPNSQLDERRRLKMALDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKQNTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTCRIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPAVAQIICDCWQKDSQLRPSFSQLITRLRRLQRLVRKTCSVNQISE | 970 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 31680992 | 31689736 | - | CePI673135_05g019630.1 | Cec05g1963 | 203766 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g1963 | 970 | ProSiteProfiles | Protein kinase domain profile. | 700 | 959 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1963 | 970 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 38 | 955 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cec05g1963 | 970 | Pfam | Protein tyrosine and serine/threonine kinase | 700 | 952 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g1963 | 970 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 144 | 348 | - | - | |
Cec05g1963 | 970 | MobiDBLite | consensus disorder prediction | 13 | 64 | - | - | |
Cec05g1963 | 970 | CDD | STKc_MAP3K-like | 706 | 949 | - | - | |
Cec05g1963 | 970 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 819 | 831 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g1963 | 970 | FunFam | Serine/threonine-protein kinase isoform 1 | 691 | 778 | - | - | |
Cec05g1963 | 970 | Gene3D | Transferase(Phosphotransferase) domain 1 | 779 | 965 | - | - | |
Cec05g1963 | 970 | PRINTS | Tyrosine kinase catalytic domain signature | 813 | 831 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g1963 | 970 | PRINTS | Tyrosine kinase catalytic domain signature | 774 | 787 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g1963 | 970 | PRINTS | Tyrosine kinase catalytic domain signature | 879 | 901 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g1963 | 970 | PRINTS | Tyrosine kinase catalytic domain signature | 923 | 945 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g1963 | 970 | PRINTS | Tyrosine kinase catalytic domain signature | 860 | 870 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g1963 | 970 | FunFam | Serine/threonine-protein kinase CTR1 | 779 | 962 | - | - | |
Cec05g1963 | 970 | SMART | serkin_6 | 700 | 959 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g1963 | 970 | Gene3D | Phosphorylase Kinase; domain 1 | 693 | 777 | - | - | |
Cec05g1963 | 970 | ProSitePatterns | Protein kinases ATP-binding region signature. | 706 | 728 | IPR017441 | GO:0005524(InterPro) | |
Cec05g1963 | 970 | MobiDBLite | consensus disorder prediction | 44 | 64 | - | - | |
Cec05g1963 | 970 | SUPERFAMILY | Protein kinase-like (PK-like) | 677 | 950 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1864 | Cec-Chr2:36440390 | Cec05g1963 | Cec-Chr5:31680992 | 6.80E-73 | dispersed | |
Cec03g1693 | Cec-Chr3:35160291 | Cec05g1963 | Cec-Chr5:31680992 | 9.10E-186 | dispersed | |
Cec04g1129 | Cec-Chr4:30890404 | Cec05g1963 | Cec-Chr5:31680992 | 5.40E-118 | dispersed | |
Cec05g1963 | Cec-Chr5:31680992 | Cec10g1954 | Cec-Chr10:34337981 | 4.10E-116 | dispersed | |
Cec10g0455 | Cec-Chr10:5435455 | Cec05g1963 | Cec-Chr5:31680992 | 4.80E-23 | dispersed | |
Cec05g1963 | Cec-Chr5:31680992 | Cec01g1612 | Cec-Chr1:30762998 | 9.70E-190 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72027 | PF07714 | PK_Tyr_Ser-Thr | 2.20E-65 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g1963 | K04424 | - | csv:101214554 | 1721.06 |