Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1963 ATGTCGAAAATGAAACATCTTCTTCGAAAGCTTCACATCGGTGGCGGAATTAATGAACACCAGCGATTGAGCGATGCCCGACCTGTTACACGACCCAGTTCGAGCCCCAGTCCAGGCCCAAGCCCCAATAGTAATCCATCTGGTTCGTCGTCTTCTGGGTCTTCCTCGTCTTTGTCTATGGCGTCTTCCACTACAATGGGGAGATTGGAGGCTGTTGAATCCGTCGTTGATCCGGCGGCTCCTGGGGATGTCGTGGGCGGTGGGTGCGTGGATTTCAATGCCTTGGAAGAGGAGTTTCAGGTGCAATTGGCTATGGCGATTAGTGCTTCCGATCCTGATTCCAGACAAGACACTGAATCCGCTCAGATCGATGCTGCTAAGCGGATGAGTCTTGGCTGTTCGCCTACAGTCTCCGGCAGTAAAGCCCTCGCCGAATTTCTCTCCCTTCAGTATTGGAGCTATAATGTTGTAAATTATGATGAAAAAGTGATGGATGGATTTTATGACTTATATGGCATTACTGCAAACTCTAGCACTCGAGGAAAGATGCCACTGTTAGTTGATCTTAAAGAAATATGTGTGACAAGTGATATTGATTATGAAGTGATTTTGGTTAACCGCTTGCTTGATCCTGAGCTTCAACAGTTGGAGAGACAAGCATATAACATATTCATGGAATGCAGAGTTTCTGAATATGGCTTCATTTTAAGTGGTCTGGTTCAAAAAATTGCTGATATCGTTGTTGCTAGAATGGGTGGTCCTGTTGGTGATGCTGAAGAAATGTTGAGAAGGTGGACCCGCAGGAGTTATGAGATGCGTAGTTCCCTGAACACTATTATTCTACCACTTGGACGTCTAGATATTGGACTTGCACGTCATAGAGCCTTGCTTTTTAAGGTACTAGCTGATAGGATTAATCTTCCATGCATACTTGTCAAAGGAAGCTACTACACTGGTACTGATGACGGAGCTGTGAACATGATCAAAATTGATAATGGAAGTGAATATATTATTGATCTTATGGGTGCTCCAGGCACGCTAATTCCCTCAGAGGCACCCAGCTGTCAATTTTCGAATTATGGCTTTGATAGGAGGCCCGCAGATGTTATAGAAGTTCCTGAAGATACGCCAGTATTACAAAATGAAGAAGCTGAATCAGTATCAATTTCATCTACTCAAGATGGAGTAGCAAATGTTTGCAACTTAATATCCAAAGAAGCTTCAGATTTAGATGCTCAATCAAAAGAAAACGTTAGGAACTTTATTGAAGAAATTCAAACTGGGAGTCCTGATTATGATTTTACGAAGCTTCTAGAATCAGAAAACAGTGTGTATGATAGTTCATTGGGTGCATGTGCACAGTCCACATCTGCACAGAAGAAGAAAGTGAAAAAAGTGTCAAAGTATGTCATTAGTGCTGCAAAAAACCCAGAGTTCGCTCAGAAATTACATGCTGTCTTGTTAGAGAGTGGTGCATCACCTCCTGCAGATTTGTTTTCAGATATAGACTCACAGGATAATGGTGAAAGCAAAGCGACTTTTCAAATGTATCCAATCAACGGAAAGGGCATTGATGTTGGTCTTCATAGTCACCCCTATAGTTTAGCAAACCATGGACAGTCTTCTGCTACTTCTACCAAAACAGAGTATTTAAACAATGCTGTCCGTGAAAATAAGCAGAAAGTGTCTGCCGAGGGATCATCTGAAGAACAAATGCCTGATATAAATGCAAACAAGCACAGTATTTTTTGGCCTCACAGTATGAAAAACGAGGGCTTTGTGTTTGTTGATGCTAATGGGGAAACAGGAAAATTGGTCGATGTTAATGGAACTTTTCATCGTGAACATGTGGATGGTGTTTCATTGACATCTGATACCGACTCTCATAAAAGACTAGGAACTGCCTTAGTGAGTGAAGAAAGAAGATTGTTACAAGATACTAGTGGTGGAAATCTTCAGTGCTTTGATTTGCGTGAAAATCCGCATGAAAATTTGTTAGAAATTGATAATAGTAAACTGCATGCTAGTGATGACCACAGTGAGACAATTAACCCAATATTAGGTGAAGTTGCAGAATGGGAAATTCCTTGGGAGGATCTCCACATTGGTGAACGTATTGGTATTGGGTCATATGGTGAGGTTTATCGAGCAGACTGGAATGGCACTGAAGTTGCTGTGAAGAAGTTCTTGGATCAAGATTTTTCCGGTGCTGCTTTGGTTCAATTAAAATGTGAAGTTGAAATCATGTTAAGGCTGAGGCATCCTAATGTTGTTCTTTTTATGGGAGCGGTCACTCGCCCTCCTCATTTCTCTATCCTTACCGAGTTTCTTCCCAGGGGAAGTTTGTATAGGTTACTGCATCGTCCCAACTCTCAACTAGATGAAAGGAGACGATTGAAAATGGCTCTTGATGTGGCCAAAGGAATGAACTACTTGCACACAAGTCATCCGACCATAGTTCATAGAGATCTGAAGTCTCCCAATCTCCTTGTTGATAAAAACTGGGTTGTAAAGGTTTGTGATTTTGGTTTGTCACGTGTCAAGCAGAATACATTTCTGTCTTCGAAGTCAACTGCTGGAACGCCTGAATGGATGGCACCAGAAGTTCTAAGGAACGAACCAGCCAATGAAAAGTGTGATGTGTATAGTTTTGGTGTGATATTGTGGGAGTTAACGACTTGCCGGATACCATGGAAAGGTTTGAATCCAATGCAGGTTGTAGGAGCTGTTGGATTCCAGAATAGACGCCTGGAGATTCCAGAAGATGTTGATCCAGCAGTTGCACAGATCATTTGCGATTGTTGGCAAAAGGACTCGCAATTGAGGCCGTCATTCTCTCAGCTTATTACTCGATTGCGGCGCCTTCAACGGCTTGTTCGGAAAACATGCTCCGTGAATCAAATATCGGAGTGA 2913 42.46 MSKMKHLLRKLHIGGGINEHQRLSDARPVTRPSSSPSPGPSPNSNPSGSSSSGSSSSLSMASSTTMGRLEAVESVVDPAAPGDVVGGGCVDFNALEEEFQVQLAMAISASDPDSRQDTESAQIDAAKRMSLGCSPTVSGSKALAEFLSLQYWSYNVVNYDEKVMDGFYDLYGITANSSTRGKMPLLVDLKEICVTSDIDYEVILVNRLLDPELQQLERQAYNIFMECRVSEYGFILSGLVQKIADIVVARMGGPVGDAEEMLRRWTRRSYEMRSSLNTIILPLGRLDIGLARHRALLFKVLADRINLPCILVKGSYYTGTDDGAVNMIKIDNGSEYIIDLMGAPGTLIPSEAPSCQFSNYGFDRRPADVIEVPEDTPVLQNEEAESVSISSTQDGVANVCNLISKEASDLDAQSKENVRNFIEEIQTGSPDYDFTKLLESENSVYDSSLGACAQSTSAQKKKVKKVSKYVISAAKNPEFAQKLHAVLLESGASPPADLFSDIDSQDNGESKATFQMYPINGKGIDVGLHSHPYSLANHGQSSATSTKTEYLNNAVRENKQKVSAEGSSEEQMPDINANKHSIFWPHSMKNEGFVFVDANGETGKLVDVNGTFHREHVDGVSLTSDTDSHKRLGTALVSEERRLLQDTSGGNLQCFDLRENPHENLLEIDNSKLHASDDHSETINPILGEVAEWEIPWEDLHIGERIGIGSYGEVYRADWNGTEVAVKKFLDQDFSGAALVQLKCEVEIMLRLRHPNVVLFMGAVTRPPHFSILTEFLPRGSLYRLLHRPNSQLDERRRLKMALDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKQNTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTCRIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPAVAQIICDCWQKDSQLRPSFSQLITRLRRLQRLVRKTCSVNQISE 970
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31680992 31689736 - CePI673135_05g019630.1 Cec05g1963 203766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1963 970 ProSiteProfiles Protein kinase domain profile. 700 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1963 970 PANTHER SERINE-THREONINE PROTEIN KINASE 38 955 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec05g1963 970 Pfam Protein tyrosine and serine/threonine kinase 700 952 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1963 970 Pfam Ethylene-responsive protein kinase Le-CTR1 144 348 - -
Cec05g1963 970 MobiDBLite consensus disorder prediction 13 64 - -
Cec05g1963 970 CDD STKc_MAP3K-like 706 949 - -
Cec05g1963 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1963 970 FunFam Serine/threonine-protein kinase isoform 1 691 778 - -
Cec05g1963 970 Gene3D Transferase(Phosphotransferase) domain 1 779 965 - -
Cec05g1963 970 PRINTS Tyrosine kinase catalytic domain signature 813 831 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1963 970 PRINTS Tyrosine kinase catalytic domain signature 774 787 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1963 970 PRINTS Tyrosine kinase catalytic domain signature 879 901 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1963 970 PRINTS Tyrosine kinase catalytic domain signature 923 945 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1963 970 PRINTS Tyrosine kinase catalytic domain signature 860 870 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1963 970 FunFam Serine/threonine-protein kinase CTR1 779 962 - -
Cec05g1963 970 SMART serkin_6 700 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1963 970 Gene3D Phosphorylase Kinase; domain 1 693 777 - -
Cec05g1963 970 ProSitePatterns Protein kinases ATP-binding region signature. 706 728 IPR017441 GO:0005524(InterPro)
Cec05g1963 970 MobiDBLite consensus disorder prediction 44 64 - -
Cec05g1963 970 SUPERFAMILY Protein kinase-like (PK-like) 677 950 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1864 Cec-Chr2:36440390 Cec05g1963 Cec-Chr5:31680992 6.80E-73 dispersed
Cec03g1693 Cec-Chr3:35160291 Cec05g1963 Cec-Chr5:31680992 9.10E-186 dispersed
Cec04g1129 Cec-Chr4:30890404 Cec05g1963 Cec-Chr5:31680992 5.40E-118 dispersed
Cec05g1963 Cec-Chr5:31680992 Cec10g1954 Cec-Chr10:34337981 4.10E-116 dispersed
Cec10g0455 Cec-Chr10:5435455 Cec05g1963 Cec-Chr5:31680992 4.80E-23 dispersed
Cec05g1963 Cec-Chr5:31680992 Cec01g1612 Cec-Chr1:30762998 9.70E-190 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72027 PF07714 PK_Tyr_Ser-Thr 2.20E-65 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1963 K04424 - csv:101214554 1721.06