Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g1987 ATGCATGCATTAGTTGATGACGGGTGGAAGGTGGAGAAGAGAGTTGCACAGTTGAGTTGCATGTGCTGCGACGCAGGAGAGACAACCCGGTCCAAGCGGCTTAAGAAAGAAAGTCCGAGTGGGATTGAATGTGTATCCACGCTCGAAGCAGCAGATAAGAAAAAGGGGCTAAGCCGGAGAACTTTTGAGAATGGGTTTTCTGCTCTCACTGAGGTTTCTCTTCAAGTTCTTCTACCTGTTGCTATAGATTACAGCTTCCGATTGAGGAGCTTCGTCGGAGTCGGCGGCGTTGATTCGGATCGGGAGGAGGAAGAGAAGGCAGAAGAAGAGGTGCAAGGTTCCAGCCTGACGATGGAAAAAGTGGCGGCGGCTAAGAAGTTTATAGAGAACCATTACAGAGCTCAGATGAAGAACATTCAAGAACGGAAGGAGAGACGATGGATGTTGGAAAGAAAGTTAGCCTCATCGGATGTGCCTAAGGAAGAACAAATCAATCTTATCAAAGATTTAGAGCGGAAAGAGACTGAGTTTATGCGACTCAAAAGGCACAAGATTTGTGTTGATGATTTTGAGCTTTTAACCATCATTGGCAGGGGGGCTTTTGGTGAGGTTCGATTATGTCGTGAGAAGAAATCTGGTGATATATATGCAATGAAAAAGTTGAAAAAATCTGAAATGCTGATGAGGGGACAGGTGGAACATGTTAGAGCAGAAAGGAATTTATTAGCAGAAGTTGCCAGCCACTGCATAGTGAAGCTTTATTACTCATTCCAGGATGCTGAATACTTGTATTTGATCATGGAATATCTACCAGGTGGAGATATGATGACTCTGCTTATGAGAGAAGACACATTGACTGAAAATGTAGCTAAATTTTACATTGCACAGAGTGTTCTAGCAATAGAATCTATCCACAGGCACAGCTATATTCACAGGGATATTAAACCTGACAATCTTCTTCTGGACAAAAATGGTCACATGAAACTTTCTGATTTTGGTCTCTGTAAGCCATTGGATTCTTTAACCCTATCAGCACTACATGAAAATAAAGCCATGGATGATGAAAATCTGGCAGAACCAATGGATATAGATGATAATAGGAGCAGTTGGAAGAGTCCCAGTGAACAGCTACACCATTGGCAAATGAACCGGAGGAAATTGGCATTTTCAACTGTTGGAACACCAGATTATATAGCTCCAGAAGTATTGCTTAAAAAAGGATATGGAATGGAGTGTGACTGGTGGTCCCTCGGTGCAATTATGTATGAGATGCTTGTAGGTTACCCTCCATTTTACTCTGATGATCCAATCACCACCTGCAGAAAGATTGTTCATTGGAAAAATCACTTGAAGTTTCCAGAAGATGCTAAGTTAACAATTGAAGCAAAGGATCTCATTTGTAGGTTGCTGTGCGATGTTGAGCATAGACTTGGTACTGGAGGAGCATACCAAATTAAAGCCCATCCTTGGTTCAAAGATGTTGTCTGGGATAGGCTCTATGAAATGGAGGCAGCATTTAAGCCTGAAGTCAATGGAGAGCTCGATACCCAGAACTTTATGAAGTTTGATGAATTGGATCCACCTATACCAGGAAAACGTGGCTCGGGACCGTCAAGGAAGATGCTATTGACTCCCAAAGATCTCAGCTTTGTTGGGTATACATACAAGAACTTCGATGCTGTCAAAGGAGGGCTTCATGGATCACTTGATTCTCAGAGATTGTCAATGAAACAGCCTCCAATGGACGTATTAAATGGCACTGGGGGAGACTACACAACCGAACTAATAGGCAATGAGGCTGAAATGCAGATGTTACAGTTTACAATACAAAATGGATATATAAAGCAAACAACAATGCCTGAAGAGTTTCTAATCATGAGAGACCAGCTAAGTAATCAAGCACTTGGTGAAAAAGTTCTCTTTGGTCAAAGGTCTTTTTTCTCCATTTCCCCTTCTTCATTAATGGCTAATTATCAAGGAACTGGATAG 1989 42.08 MHALVDDGWKVEKRVAQLSCMCCDAGETTRSKRLKKESPSGIECVSTLEAADKKKGLSRRTFENGFSALTEVSLQVLLPVAIDYSFRLRSFVGVGGVDSDREEEEKAEEEVQGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWMLERKLASSDVPKEEQINLIKDLERKETEFMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGDIYAMKKLKKSEMLMRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLMREDTLTENVAKFYIAQSVLAIESIHRHSYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDSLTLSALHENKAMDDENLAEPMDIDDNRSSWKSPSEQLHHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWKNHLKFPEDAKLTIEAKDLICRLLCDVEHRLGTGGAYQIKAHPWFKDVVWDRLYEMEAAFKPEVNGELDTQNFMKFDELDPPIPGKRGSGPSRKMLLTPKDLSFVGYTYKNFDAVKGGLHGSLDSQRLSMKQPPMDVLNGTGGDYTTELIGNEAEMQMLQFTIQNGYIKQTTMPEEFLIMRDQLSNQALGEKVLFGQRSFFSISPSSLMANYQGTG 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31886686 31895171 + CePI673135_05g019870.1 Cec05g1987 203790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g1987 662 FunFam Non-specific serine/threonine protein kinase 510 520 - -
Cec05g1987 662 SMART serkin_6 190 491 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1987 662 Pfam Protein kinase C terminal domain 510 555 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1987 662 Pfam Protein kinase domain 191 340 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1987 662 Pfam Protein kinase domain 382 491 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1987 662 SMART pkinase_C_6 492 557 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1987 662 FunFam Non-specific serine/threonine protein kinase 151 273 - -
Cec05g1987 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g1987 662 CDD STKc_NDR_like 188 556 - -
Cec05g1987 662 CDD MobB_NDR_LATS-like 124 185 - -
Cec05g1987 662 ProSiteProfiles AGC-kinase C-terminal domain profile. 492 565 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1987 662 ProSiteProfiles Protein kinase domain profile. 190 491 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g1987 662 FunFam Non-specific serine/threonine protein kinase 274 341 - -
Cec05g1987 662 ProSitePatterns Protein kinases ATP-binding region signature. 196 219 IPR017441 GO:0005524(InterPro)
Cec05g1987 662 FunFam Non-specific serine/threonine protein kinase 390 509 - -
Cec05g1987 662 SUPERFAMILY Protein kinase-like (PK-like) 187 537 IPR011009 -
Cec05g1987 662 Gene3D Transferase(Phosphotransferase) domain 1 276 508 - -
Cec05g1987 662 PANTHER SERINE/THREONINE-PROTEIN KINASE 100 559 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cec05g1987 662 Gene3D Phosphorylase Kinase; domain 1 181 275 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1987 Cec-Chr5:31886686 Cec06g0728 Cec-Chr6:8430571 3.50E-183 dispersed
Cec01g1826 Cec-Chr1:32714375 Cec05g1987 Cec-Chr5:31886686 7.00E-45 transposed
Cec04g2253 Cec-Chr4:40163024 Cec05g1987 Cec-Chr5:31886686 4.30E-182 transposed
Cec08g1646 Cec-Chr8:27815096 Cec05g1987 Cec-Chr5:31886686 5.60E-168 transposed
Cec03g1597 Cec-Chr3:34064320 Cec05g1987 Cec-Chr5:31886686 7.80E-224 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72028 PF00069 Pkinase 1.10E-42 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g1987 K08790 - csv:101212228 1012.68