Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2047 ATGGCTGATGGAGGATCAGTTTCTGGGTCAAGAATGTGGTGTTCAATTCCTGAGAAGCTTCAACTGCATGGCGCCATGTTGGCCTTGCAATTTGGCTATGCTGGCTTCCACGTTGTCTCAAGGGCTGCTCTTAATATGGGCATTAGTAAACTTGTCTTCCTAGTTTATAGGAACATCATTGCCTTTCTGCTTCTACTTCCCTTTGCATATTTCCTCGAAAAGAAGGAGCGCCCTCCCATTACTTTCAATTTTCTCCTTCAGTTCTTCCTCCTTGCCCTTGTTGGAATCACGGCAAACCAAGGGTTCTACTTGCTAGGTTTGGAGAACACGTCACCGACGTTTGCATCAGCTATACAAAACTCGGTTCCGGCCATTACATTCCTTATGGCTGCATTGCTCAGAATAGAAGAAGTGCGACTAAACAGAAAAGATGGTATAGCAAAAGTGATTGGAACGATATGCTGTGTTGCTGGGGCCACAGTGATCACTCTGTACAAAGGTCCAACAATATACAGCCCAGTTCATTCACTACAAACAGCTGCCACCACCACTAGCGCACCCATTTTCGCTTCTCTTGGGGACGCAACCGGGAAAAGCTGGACCCTTGGCTGTGTCTTTTTGATCGGTCATTGCTTGTCTTGGTCTGGATGGCTTGTTTTGCAAGCACCCGTTTTAAAAAAATACCCAGCTCGTCTCTCTGTCACTTCTTATACTTGTTTCTTTGGGATAATCCAATTTATCATCATCGCTGCCATTGCGGAGCGAGATGTTGAGGCTTGGCTCTTTCACTCCGGTGGTGAAATCTTTAGCGTCCTGTATGCGGGAGTGGTAGCTTCGGGAATTGCTTTCGCAGTGCAGACATGGTGTATTCAAAGAGGTGGGCCAGTGTTCGTTGCTGTTTACCAACCAGTTCAGACTTTGGTTGTCGCTGTCATGGCTTCCTTCGCCTTGGGTGAAGAGTTCTTCTTGGGAGGGATCATCGGGGCGGTATTGATCATCGCCGGATTATACTTCGTCTTATGGGGCAAAAGCGAAGAGAGAAAATTTGCACTTGAGAAGGCTGCAATCCTCTCCACTCCGGACCACACTAACAACAGAACACCCCCACTCATCAAGCCCTCTATTACTCAGCCACTTCTCATCCACTCATCAAACGACAACGTTTGA 1167 47.22 MADGGSVSGSRMWCSIPEKLQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFLLLLPFAYFLEKKERPPITFNFLLQFFLLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAALLRIEEVRLNRKDGIAKVIGTICCVAGATVITLYKGPTIYSPVHSLQTAATTTSAPIFASLGDATGKSWTLGCVFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFIIIAAIAERDVEAWLFHSGGEIFSVLYAGVVASGIAFAVQTWCIQRGGPVFVAVYQPVQTLVVAVMASFALGEEFFLGGIIGAVLIIAGLYFVLWGKSEERKFALEKAAILSTPDHTNNRTPPLIKPSITQPLLIHSSNDNV 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32397010 32399784 + CePI673135_05g020470.1 Cec05g2047 203850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2047 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 345 - -
Cec05g2047 388 PANTHER WAT1-RELATED PROTEIN 25 352 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cec05g2047 388 Pfam EamA-like transporter family 202 340 IPR000620 GO:0016020(InterPro)
Cec05g2047 388 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020(InterPro)
Cec05g2047 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2047 Cec-Chr5:32397010 Cec06g1656 Cec-Chr6:30162880 7.70E-106 dispersed
Cec05g2047 Cec-Chr5:32397010 Cec08g1510 Cec-Chr8:26841942 5.60E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2047 - - - 0.0