Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2116 ATGTATATTCTTGTGGTTTTGGGTCTTCTTTTTGTCGGAATCGTCTTCAAATTTCTATACTCCAATTTATGGGTTCCATGGAAAATTCAAATCCACTTCCGAAAACAGGGCATAACAGGGCCTTCCTACCGTCCGATCGTCGGTAACGCCACCGATATCCGCCGTCTGTACACGGAGGCGAATGCGAAGCCAATTCCGCTGACCCACGATATAGTGTGTCGGGTGTTGCCTTATATTCACCGATGGTCCGAGGAGTACGGGAAGATGTTTGTGTATTGGTTCGGGTCGAAACCGAGGCTGGCGATATCCGACCCAGAAATGATTAAGGAGGTGCTTACCAATACGGGTGGGCCTTTTAGAAAGGTCGGGTTCACCCCAGTTTCCAAGTTGCTGTTTGGAGAAGGACTTGTGGGACTCGAGGGCGAACAATGGGTTGTCCACCGGAGAATCACAAATCAGGCTTTCACTATCGACCGTGTGAAGGGGTGGTTACCAGAGATTGCATTGAGTGTTTGTAATGTGTTGGAGAAATGGGAAGAGATGAAGGGAGGAAGGGAGGAGTTTGAATTAGATGTCCATAAACAACTTCGTCTCCTCACAGCAGACGTAATTTCAAGAACTGCTTTTGGAAGTAATTTTGAAGAAGGCAAACGCATTTTCAATTTGCAAGAACAACAAATGCATCATTTTCTCCAGGCCGTCTCAAGTGTTTATATTCCAGGCTACAGATTTTTGCCTACCAAGGGGAATAGAGAGAGGGAGAGGCTGGAAAAAGAAACTCGTGCATCAATAAAAGCACTAGTCGAAAGTGAGAAAAATAGCAAAGAAAGAGAAAACTCAACAAATCTGCTCAGCCTGTTACTGTCATCTTACAAGAGCCAAAATGGGGAAATAGAAAAACTTAGAGTGGAGGAAGTTGTAAATGAATGCAAGACATTCTACTTTGCCGGGATGGAAACAACTGCCAATCTTTTAACTTGGGCCCTTTTACTACTAGCACAGCATCAAGAATGGCAAGATCGAGCTCGACAAGAAGTCATCAATGTTTGCGGCCACAAGACACCGCCCGTGGCCGATAATCTAACTGAACTTAAACTAGTGGGTATGATAGTCAATGAAACACTTCGACTTTATCCTCCTGCGGTGATGATGATGCGACGAACAACAAAACGGTTGACACTAGGAAAGGTCGACGTGCCAGAAGGCACACAACTTCAACTTTCAATTGCTGCAATCCACCATGACACAGAGCTTTGGGGAGAAGATGCAAGCAACTTCAACCCTATGAGATTTAGTGAGCCTAGGAAGCATCTAGCTTCATTTTTGCCATTTGGATTGGGTCCAAGAATTTGTGTAGGGCAACATTTGGCTCTGATTGAGGCCAAAGTTGCATTGGCTATGATAATTCAGCGATTCTCTTTTACGATTTCCCCAACCTACACGCATGCCCCTATGATGTTTGTAAGCTTAAACCCTCAATTTGGTGTTCAACTCCTCGTTAGGAGCTTATGGAATTGA 1518 44.66 MYILVVLGLLFVGIVFKFLYSNLWVPWKIQIHFRKQGITGPSYRPIVGNATDIRRLYTEANAKPIPLTHDIVCRVLPYIHRWSEEYGKMFVYWFGSKPRLAISDPEMIKEVLTNTGGPFRKVGFTPVSKLLFGEGLVGLEGEQWVVHRRITNQAFTIDRVKGWLPEIALSVCNVLEKWEEMKGGREEFELDVHKQLRLLTADVISRTAFGSNFEEGKRIFNLQEQQMHHFLQAVSSVYIPGYRFLPTKGNRERERLEKETRASIKALVESEKNSKERENSTNLLSLLLSSYKSQNGEIEKLRVEEVVNECKTFYFAGMETTANLLTWALLLLAQHQEWQDRARQEVINVCGHKTPPVADNLTELKLVGMIVNETLRLYPPAVMMMRRTTKRLTLGKVDVPEGTQLQLSIAAIHHDTELWGEDASNFNPMRFSEPRKHLASFLPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTISPTYTHAPMMFVSLNPQFGVQLLVRSLWN 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 32908232 32910139 + CePI673135_05g021160.1 Cec05g2116 203919
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2116 505 Gene3D Cytochrome P450 28 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 496 IPR050665 GO:0004497(PANTHER)
Cec05g2116 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 SUPERFAMILY Cytochrome P450 35 501 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 Pfam Cytochrome P450 79 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec05g2116 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1336 Cec-Chr5:13963554 Cec05g2116 Cec-Chr5:32908232 1.90E-96 dispersed
Cec05g2111 Cec-Chr5:32893900 Cec05g2116 Cec-Chr5:32908232 4.70E-57 dispersed
Cec05g2112 Cec-Chr5:32895295 Cec05g2116 Cec-Chr5:32908232 1.50E-20 dispersed
Cec05g2113 Cec-Chr5:32896142 Cec05g2116 Cec-Chr5:32908232 1.40E-52 dispersed
Cec05g2116 Cec-Chr5:32908232 Cec11g0290 Cec-Chr11:3145728 1.50E-117 dispersed
Cec05g2114 Cec-Chr5:32898890 Cec05g2116 Cec-Chr5:32908232 2.10E-292 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2116 - - - 0.0