Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2157 ATGAACACACCATCTTCCTTGCCTGACCTCTCCTTGCAGATCAGTCTTCCGATGTCCATGATGTTGACACCGCCGTGTGAGACGAAGGCCAAGCCACGGAGCTCAACCACCACGGATTCGAGTTGTAGTGGCAAAAGTGATTTGAGCCATGAAAATGGTCTCTTCCGTTTAGGGTTTGAAGTGGGAGATATGGATGTTCTTCCTCGCCGGCGTCATCATAATGTCCGTGGCCGCCGCGACTTCAAAAGAAGCGGTGGTGGTGTCGGTTGTGGAGTAAGAAGAAGCATCAGAGCTCCAAGAATGAGATGGACTACAACTCTACATGCTCATTTTGTACATGCTGTTCAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTTAAGGATCTAACCCTAGCTCACGTCAAAAGCCATTTACAGATGTACAGAACAGTGAAGAATACTGTGAAGGGAACAGATGATTGTGGAAGGACTGAGATTGAAGAAGATGCCATTGTTTTATCGTCTTCTGTTCAAAAATCTAACTTTCAATCACCTCCTTTGCAGAGAATCCAAAGAAGTAGTTTGGTAACATCAATGCACAAGAGTTGCGACAGGACCAAGTCAAACGCCGACGCTCTCGCTAAATCTAGAGGAATGAAGGTTGAAGGAAGCAATGGAGATTATCACGAGGCAATCACCATGCAACGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGGCAATTGGATTATGGTGATGCAAAAGAGCTTGCCCTTCTCAATTGCTAA 798 45.11 MNTPSSLPDLSLQISLPMSMMLTPPCETKAKPRSSTTTDSSCSGKSDLSHENGLFRLGFEVGDMDVLPRRRHHNVRGRRDFKRSGGGVGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKNTVKGTDDCGRTEIEEDAIVLSSSVQKSNFQSPPLQRIQRSSLVTSMHKSCDRTKSNADALAKSRGMKVEGSNGDYHEAITMQRINLEFTLGRPSWQLDYGDAKELALLNC 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33201864 33205197 - CePI673135_05g021570.1 Cec05g2157 203960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2157 265 NCBIfam myb-like DNA-binding domain, SHAQKYF class 99 152 IPR006447 GO:0003677(InterPro)
Cec05g2157 265 Gene3D - 98 155 - -
Cec05g2157 265 FunFam Myb family transcription factor 97 155 - -
Cec05g2157 265 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 3 252 IPR044847 GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro)
Cec05g2157 265 SUPERFAMILY Homeodomain-like 96 153 IPR009057 -
Cec05g2157 265 MobiDBLite consensus disorder prediction 29 47 - -
Cec05g2157 265 Pfam Myb-like DNA-binding domain 100 151 IPR001005 -
Cec05g2157 265 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2157 Cec-Chr5:33201864 Cec09g1158 Cec-Chr9:11511445 2.10E-30 dispersed
Cec05g2157 Cec-Chr5:33201864 Cec08g1594 Cec-Chr8:27456395 1.50E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29628 PF00249 Myb_DNA-binding 1.00E-05 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2157 - - - 0.0