Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g2157 | ATGAACACACCATCTTCCTTGCCTGACCTCTCCTTGCAGATCAGTCTTCCGATGTCCATGATGTTGACACCGCCGTGTGAGACGAAGGCCAAGCCACGGAGCTCAACCACCACGGATTCGAGTTGTAGTGGCAAAAGTGATTTGAGCCATGAAAATGGTCTCTTCCGTTTAGGGTTTGAAGTGGGAGATATGGATGTTCTTCCTCGCCGGCGTCATCATAATGTCCGTGGCCGCCGCGACTTCAAAAGAAGCGGTGGTGGTGTCGGTTGTGGAGTAAGAAGAAGCATCAGAGCTCCAAGAATGAGATGGACTACAACTCTACATGCTCATTTTGTACATGCTGTTCAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAATCAGTATTGGAGCTTATGAATGTTAAGGATCTAACCCTAGCTCACGTCAAAAGCCATTTACAGATGTACAGAACAGTGAAGAATACTGTGAAGGGAACAGATGATTGTGGAAGGACTGAGATTGAAGAAGATGCCATTGTTTTATCGTCTTCTGTTCAAAAATCTAACTTTCAATCACCTCCTTTGCAGAGAATCCAAAGAAGTAGTTTGGTAACATCAATGCACAAGAGTTGCGACAGGACCAAGTCAAACGCCGACGCTCTCGCTAAATCTAGAGGAATGAAGGTTGAAGGAAGCAATGGAGATTATCACGAGGCAATCACCATGCAACGGATTAATTTAGAGTTCACTCTTGGAAGACCAAGTTGGCAATTGGATTATGGTGATGCAAAAGAGCTTGCCCTTCTCAATTGCTAA | 798 | 45.11 | MNTPSSLPDLSLQISLPMSMMLTPPCETKAKPRSSTTTDSSCSGKSDLSHENGLFRLGFEVGDMDVLPRRRHHNVRGRRDFKRSGGGVGCGVRRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKNTVKGTDDCGRTEIEEDAIVLSSSVQKSNFQSPPLQRIQRSSLVTSMHKSCDRTKSNADALAKSRGMKVEGSNGDYHEAITMQRINLEFTLGRPSWQLDYGDAKELALLNC | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 33201864 | 33205197 | - | CePI673135_05g021570.1 | Cec05g2157 | 203960 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g2157 | 265 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 99 | 152 | IPR006447 | GO:0003677(InterPro) | |
Cec05g2157 | 265 | Gene3D | - | 98 | 155 | - | - | |
Cec05g2157 | 265 | FunFam | Myb family transcription factor | 97 | 155 | - | - | |
Cec05g2157 | 265 | PANTHER | TRANSCRIPTION FACTOR KAN2-RELATED | 3 | 252 | IPR044847 | GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro) | |
Cec05g2157 | 265 | SUPERFAMILY | Homeodomain-like | 96 | 153 | IPR009057 | - | |
Cec05g2157 | 265 | MobiDBLite | consensus disorder prediction | 29 | 47 | - | - | |
Cec05g2157 | 265 | Pfam | Myb-like DNA-binding domain | 100 | 151 | IPR001005 | - | |
Cec05g2157 | 265 | MobiDBLite | consensus disorder prediction | 22 | 47 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g2157 | Cec-Chr5:33201864 | Cec09g1158 | Cec-Chr9:11511445 | 2.10E-30 | dispersed | |
Cec05g2157 | Cec-Chr5:33201864 | Cec08g1594 | Cec-Chr8:27456395 | 1.50E-36 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29628 | PF00249 | Myb_DNA-binding | 1.00E-05 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g2157 | - | - | - | 0.0 |