Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2193 ATGGTGGCGAGTGCTTTGTCTTTTGATGCCAACACAATCCATATGAAACGACAAAATAGGATAAAGGAAGGGCTAAAAAGCAAAAAGTGGCGATTGGCAATTGACGGAGATGAGAACGAAGCCGGCATTAGGGGTATTTTAGTCATTCGCCAGTGGAATTGGATCTTACTAACATACATAAATGACTTCAATCTCACTCGTGTCAACACTCCATCGATCTTTCAATTGCACCACATTGGTGCAAGTTCGTTAGGTAGGATCATCATCTTAGCTAACTTTTTGGATGATCTTTCGGGTCTGAGTACAATGGATTCCATAGGCGTTTCCCGTGCTCTTCCGAAAGAAGCATCTGGAAATGACTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATGGAACGAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAAAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAGGCTCTGGAGAAGTCGGAATAGGAGAGCACTAATCTTGGGGTGGGCTTCTCTACCTTGGAAAAAGCTTGAAGACAACGACAAACTGAATGGTCAGTGCTTCATTATCCGGAGCTGCAAGATTTTCCTTTACAGGATTTTGGATTCACAGAGAGAAGAGAAGACGAGCATAAAGATGTGGGGATTTGGAGGAAGGTATTACTGGGGAAGAAGAGAGCGACTCGAGAAAGTCGAAGGGATTGTTGTGGCGTTCGCATGGATGTCTAGTCAGGAGCGGCACTTGAAACGATATGTGGACATGTATTCCTCTCTGGGTTGGAATTCACTCGTTTGCCATTCTGAATTCCTCAATATAAAGGCAAATTTATTTTGCCAGCTTCTCGAGATTTCTAGCGGCTATTCTTCAAATTCTATCTTCATCTGTTGTAATGTTCATTTAACGAGTACGCTTACCGATACTAAGAGGGAATTTGGATATGGGATTTTGGATTTACTTTCTTTGTTGGCTGAAAAATTGAAGACAATAATGCCTAGATTCTTATGGCAGGGAACTAACGCTGGGAGGTTCTTCCCCGATAAGGCTGCATCTCTGGCATTTGACATTCTTAAAGTATTAGTCGAGGAGCTAAAAATTAAGAGATGCCCTGTAGTATTTGCATCATTTTCTGGTGGGCCAAAAGCATGCATGTATAAGGTTCTCCAGATAATTGAGGGATACCATGAACCGCAACAACATAGTTCGGATGATTATCAACTGGTCAGGGACTGTCTTGCTGGCTATATTTATGATTCCAGTCCAGTTGATTTTACCAGTGACTTGGGAACTCGATTTATTCTTCATCCAACTGTGATGAAAGCATCCCAACCACCAAGAATAGTATCATGGGCAGCACATAACATTGCTTCTGGTCTTGACGCACTCTTCCTCAACAGATTTGAATCACACCGTGCAGAATATTGGCAAACTCTTTATGCCTCAGTTAGTATGAAAGCTCCTTATCTTATTTTGTGCTCGGAAGAGGATGATCTTGCTCCCTATCAGACAATCTTCAATTTTGCTCAACGACTAGAAGATCTTGGGGGAGATGTTAAATTAATGAAATGGAATGGCTCCCCACATGTAGGGCATTATCTGCATTTTCCCAATGAATATAGAGCTGCTGTCACAGAGTTGCTAGGTAAGGCCGCTGGAGTTTACTGTCAAAGAACTAGACCTGATGAAGAAGTAACTGCCGTAGATAAAATGAATGGTGACTCTTGCAATACAACACCTGAAGTTAGAAAAGCTGCATCTCCATCAAGTAGCTTTCAGGAGCCTGCTCTAGCTCCAAATGACCATCTTCTCTTCTCGAGCACGATGGATGGATTTGACTACAGGGTCATAGGATCCATGCGAGACGAACACATGGAAGGAGTAATGCAGCTATCTAATTCACCAAGTACCATTCCTCATGGAGTTCTCGGTCAAATCCTTTACGATGTTTCTGTTCCGAAGAACGTTGACAATTGGGACATTGGATCATCAAATTCTTCAAATGGTGTCTTGCGTGAGCACACAAGATGGCATACTTCCTTCAATCCCATCAAACTGATGCGTCGCTCAAGACTAGACAAGGAATTTACTGGTTTGTTGAAAACTTTGGCTATTGGGAAACTATGGAGCAAGCAACAATGCATTGTAAGGCATTTCCAGCTTCGGCAAGTTGGTCACTTTGCCTTCGTTGAAAGTATGAAGGTTCTTGTAACTGGAGCGTCTGGGTATCTGGGCGGAAGGCTATGCCGTGCATTATTGAACCGAGGCTTCTCCGTTCGGGCTTTGGTCCGTCCAACCAGCGACCTTTCTGCTCTTCCTCATGATCCTTCTGCTCTTGAGCTCGTTCATGGCGATATCACCGACTACCAGTCGCTTCTAGAGGCATGCTCGGGCTGCCATGTCGTCTTCCACGCGGCCGCAATGGTCGAGCCATGGCTTCCTGATCCATCGAAATTCATCTCCGTTAATGTACGAGGGTTGGAGAACGTGTTGCAAGCGGTTAGAGAGACGAAAACAATCGAGAAGATTATATATACGTCGTCCTTTTTCGCGCTTGGCTCAACCGATGGGTATGTTGCCGATGAAAAACAGGTCCATCACGAGAAATTCTTTTGTACAGAGTACGAGAAATCGAAGGCCATTGCTGACAAGATTGCTTTGCGAGCTGCATCTGACGGCATTCCGATAGTGCCGGTTTATCCCGGAGTTATCTATGGCGCTGGAAAAGTCACGGCTGGGAATGTTATTGCCCGCATGCTGATTGAACGGTTCAATGGGCGATTACCCGGATATTTAGGCCATGGGAACGATAGGTATTCTTTTAGTCATGTCGATGATGTGGTAGAAGGGCATATTGCAGCAATGCAGAAAGGTCGAGTAGGGGAAAGGTATCTTCTAACAGGAGAAAATGCATCATTTGTGGAAGTTTTTGACACAGCTGCAGCCATAACTGGTACAACAAAACCAATCTTTAACATTCCATTGTGGTTAATTGAAACCTATGCCTGGCTTTCAGTTTTGATCTCTCGATTCACAGGGAAACTTCCTCTCATCAGCCCCCCGACTGTGAAGGTTTTGAGACATCAGTGGGCATATTCTTGTGACAAGGCAAAACAAGAGCTGGATTATAACCCCAGAAGTTTAAAAGAAGGATTAGAAGAGATGCTACCATGGCTAAAGAGCTTGGGTTTGATAAAATATTAA 3318 44.3 MVASALSFDANTIHMKRQNRIKEGLKSKKWRLAIDGDENEAGIRGILVIRQWNWILLTYINDFNLTRVNTPSIFQLHHIGASSLGRIIILANFLDDLSGLSTMDSIGVSRALPKEASGNDLVFSCCQRVEQWNEVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAKNPSLSRLCYRRLWRSRNRRALILGWASLPWKKLEDNDKLNGQCFIIRSCKIFLYRILDSQREEKTSIKMWGFGGRYYWGRRERLEKVEGIVVAFAWMSSQERHLKRYVDMYSSLGWNSLVCHSEFLNIKANLFCQLLEISSGYSSNSIFICCNVHLTSTLTDTKREFGYGILDLLSLLAEKLKTIMPRFLWQGTNAGRFFPDKAASLAFDILKVLVEELKIKRCPVVFASFSGGPKACMYKVLQIIEGYHEPQQHSSDDYQLVRDCLAGYIYDSSPVDFTSDLGTRFILHPTVMKASQPPRIVSWAAHNIASGLDALFLNRFESHRAEYWQTLYASVSMKAPYLILCSEEDDLAPYQTIFNFAQRLEDLGGDVKLMKWNGSPHVGHYLHFPNEYRAAVTELLGKAAGVYCQRTRPDEEVTAVDKMNGDSCNTTPEVRKAASPSSSFQEPALAPNDHLLFSSTMDGFDYRVIGSMRDEHMEGVMQLSNSPSTIPHGVLGQILYDVSVPKNVDNWDIGSSNSSNGVLREHTRWHTSFNPIKLMRRSRLDKEFTGLLKTLAIGKLWSKQQCIVRHFQLRQVGHFAFVESMKVLVTGASGYLGGRLCRALLNRGFSVRALVRPTSDLSALPHDPSALELVHGDITDYQSLLEACSGCHVVFHAAAMVEPWLPDPSKFISVNVRGLENVLQAVRETKTIEKIIYTSSFFALGSTDGYVADEKQVHHEKFFCTEYEKSKAIADKIALRAASDGIPIVPVYPGVIYGAGKVTAGNVIARMLIERFNGRLPGYLGHGNDRYSFSHVDDVVEGHIAAMQKGRVGERYLLTGENASFVEVFDTAAAITGTTKPIFNIPLWLIETYAWLSVLISRFTGKLPLISPPTVKVLRHQWAYSCDKAKQELDYNPRSLKEGLEEMLPWLKSLGLIKY 1105
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33498329 33510493 + CePI673135_05g021930.1 Cec05g2193 203996

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2193 1105 Gene3D alpha/beta hydrolase 435 587 IPR029058 -
Cec05g2193 1105 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 766 1101 IPR036291 -
Cec05g2193 1105 Pfam NAD dependent epimerase/dehydratase family 773 1002 IPR001509 -
Cec05g2193 1105 Pfam Eukaryotic protein of unknown function (DUF829) 451 697 IPR008547 -
Cec05g2193 1105 SUPERFAMILY alpha/beta-Hydrolases 448 588 IPR029058 -
Cec05g2193 1105 MobiDBLite consensus disorder prediction 611 632 - -
Cec05g2193 1105 Gene3D - 764 1104 - -
Cec05g2193 1105 CDD AR_FR_like_1_SDR_e 773 1097 - -
Cec05g2193 1105 PANTHER UNCHARACTERIZED 245 312 IPR008547 -
Cec05g2193 1105 FunFam NAD(P)-binding Rossmann-fold superfamily protein 770 1104 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2193 K15891 - - csv:101212227 660.603
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1171 Cec-Chr5:10642047 Cec05g2193 Cec-Chr5:33498329 5.70E-91 dispersed
Cec05g2193 Cec-Chr5:33498329 Cec07g0780 Cec-Chr7:16565547 8.80E-38 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g783 . . . . . . . . . . Cma01g01851 Cma09g00216 Car01g01444 . . Cpe06g00151 . . . . . . . . . . . . . . . . . Cone17ag0836 Cone20ag0181 Lsi04g01576 Csa04g02394 . . . . . . . . Bma01g00687 . Sed01g2650 Cmo01g01912 Cmo09g00209 . . . Car09g00184 . . Bhi09g03341 Tan01g4811 Cmetu07g1348 . Hepe01g1746 . . Cla05g02027 Cam05g2177 Cec05g2193 Cco05g2240 Clacu05g2170 Cmu05g2037 Cre05g2165 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009167 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 0 2 1 1 34