Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2233 ATGAATAACAGGAATTTCGTCTGTAATCCTATGGTTGCTCTTCCATTATTACCTTCCTCTCACTTGCTGTTTTCGAATAGCGCCATTGATTTCAGGCACAGGGTCTCCATTGTTGTAAAACCCACTTTCCAGGGTTCGTGCAGATGGCGAATCCGAGCCACCGCCGAGAACGGAGCTTCATCGGCGTCGACTTCCCAGATCGACATGGTGAGGAACAGGGAGGGGGTTTTTACCGCCAAACAAAGCAAGGTTGTCGTGCTTTGGGATCTTGATAACAAACCCCCTCGTGGGCCGCCGTACGAGGCGGCTATGGCGCTGAAACGAGTAGCACAACGCTTCGGACAAGTCGTCGACATGTCGGCTTACGCCAATCGCCATGCCTTTATCCATTTGCCGCAATGGGTTGTTGAAGAACGCCGCGAGCGTCGGCAATTGGATATTCTTGAGCGTAAAGGGTTGTTCACGCCGTCCGAATCGTACGTCTGCGGGGTTTGCGGTCGCAAGTGCAAAACAAACCTAGACCTTAAGAAGCATTTCAAGCAACTTCACGAACGCGAGCGCCAGAAGAAATTGAACAGAATGAGGTCTCTCAAGGGCAAAAAGCGACAGCGTTATAAGGAAAGGTTCGTATCTGGAAACCATAAGTACAATGAAGCAGCGAGGTCTCTGATTACTCCCAAAGTTGGATATGGATTGGCCTCAGAATTGAGACGTGCTGGGGTTTTTGTGAAGACTGTAGAGGATAAGCCTCAGGCAGCTGATTGGGCTTTGAAGAGGCAGATGCAACACTCGATGCGTCGTGGTATTGATTGGATGATTCTTGTTTCCGATGATTCGGATTTCTCAGAGATGTTAAGGAAGGCTAAGGAAGCTAATTTGGGAACTGTGGTGGTGGGAGATCGTGATAGGGCATTGGGTAGGCACGCAGATTTATGGGTTCCATGGATGGGTGTTGAAAATGGGGATATTACAGAGGAGGATTTGGTGCCCAAAAGATGGAGGATGAGAAGAAGAGACGAGGAAATGGATGGAGATGATGATGGTTTTTCAGTTTCTCGTTTCTATGGAGACACTGAAGCTGGTGATTTGGAGAGTGTAGTGGAAGAGCTTGTTTCCGCAAGTACAGAAGAGTTCAATGGCTTTAGAATTTCTGCATTTTCAGAGGGGGAAGATGAAGAAGATGATTGGGTTGAAGAAGATGTGGGATCTGACTATCTGCTAGTGATGAGTGACGAGGAAGATGGGCATTCCTGA 1254 48.17 MNNRNFVCNPMVALPLLPSSHLLFSNSAIDFRHRVSIVVKPTFQGSCRWRIRATAENGASSASTSQIDMVRNREGVFTAKQSKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRERRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFVSGNHKYNEAARSLITPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMRRGIDWMILVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENGDITEEDLVPKRWRMRRRDEEMDGDDDGFSVSRFYGDTEAGDLESVVEELVSASTEEFNGFRISAFSEGEDEEDDWVEEDVGSDYLLVMSDEEDGHS 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33824559 33825812 - CePI673135_05g022330.1 Cec05g2233 204036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2233 417 ProSitePatterns Zinc finger C2H2 type domain signature. 162 183 IPR013087 -
Cec05g2233 417 Gene3D - 77 316 - -
Cec05g2233 417 Coils Coil 180 200 - -
Cec05g2233 417 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 188 IPR013087 -
Cec05g2233 417 CDD PIN_LabA-like 170 300 - -
Cec05g2233 417 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 51 396 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2233 Cec-Chr5:33824559 Cec10g0316 Cec-Chr10:3806233 4.90E-58 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29635 None None None None Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2233 - - - 0.0