Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g2257 | ATGATTGGGAATTTGGGATCCTCCGAAAACAAAGAAACGCTGGCGTTTCAGTTTAAAACCCGGGAAATCCCAGGTCACACTGAAACTATGGCGGATAAGGAGAATATATTTCGATTTACTAGGGGTTCTAAGAAGAGGGCCGCCGAAGCCGCTACCCCCGACGACCGCTCTGCTAACAAGAAGAGAGTCGTTCTTGGAGAGCTCCCTATTTTACAGAATGCTACTTCTTCCGTCGATCGTAAGTCCAGGTCTAGAGCGACCAGGCAGAGGCGGAGAGTAAAATCAAGGGATACTGCCGGCACAAGTGCTGCTGCTGCTGCTGCTCCTGAAATCAATACACTTCCGGAAGGCGATGTCAAGTTATCAGATGAGGGCAATTCGGAAGACCCGCAAATGTGCAGGGTTTACGCCTCTGATATTTATGCATATCTTCGCGCAATGGAGACTGATCCAAGAAGAAGACCCTTACCAGATTACATCGGGAGGGTACAAAAGGATATTAGTGCCAATATGAGGGGAATTCTGGTGGATTGGTTGGTTGAAGTTGCAGAAGAATACAAACTAGTTTCAGATACTCTTTACCTCTCTATTTCATATGTAGACAGATACTTATCTCTAAATGAAATCAGCAGGCAAAAACTTCAGTTGCTGGGCGTTTCTGCCATGCTCATTGCCTCAAAGTATGAAGAAATCAGTCCTCCACATGTTGAAGAATTTGTTTATATCACAGACAATACCTACAATAGAGAAGAGGTGGTTGAGATGGAAGCTGAAATATTGAAGTCACTAGAATTTGAACTTGGAAATCCCACAATAAAGACATTTTTAAGGAGATTCACAATGATTGCTCAAGAGACTTATGAGTTTAATACTTTGCAATTTGAATTCTTGGGCTACTATCTTGCTGAGTTAAGCCTACTAGACTACAACTGTGTCAAATTCTTACCGTCTCTCATTGCTGCATCTGTCATATTTCTAGCACGATTTATGATCCAACCTAAGAAGCATCCTTGGACCTCCAGGTTGGAGCATTTTACTGGATATAAGCCAGCTGATATCAAAGATTGCGTTCTACTTGTACATGATTTATACCTTAGTAGAAGAGGAGGCGCTTTGGCAGCTATAAGGGAGAAATACAAACAACACAAGTTCAAATTTGTATCTGTCATGCCTTCACCTCCAGAGATTCCTATTCCATATTTTGAAGATGTTAGAATATGA | 1221 | 42.1 | MIGNLGSSENKETLAFQFKTREIPGHTETMADKENIFRFTRGSKKRAAEAATPDDRSANKKRVVLGELPILQNATSSVDRKSRSRATRQRRRVKSRDTAGTSAAAAAAPEINTLPEGDVKLSDEGNSEDPQMCRVYASDIYAYLRAMETDPRRRPLPDYIGRVQKDISANMRGILVDWLVEVAEEYKLVSDTLYLSISYVDRYLSLNEISRQKLQLLGVSAMLIASKYEEISPPHVEEFVYITDNTYNREEVVEMEAEILKSLEFELGNPTIKTFLRRFTMIAQETYEFNTLQFEFLGYYLAELSLLDYNCVKFLPSLIAASVIFLARFMIQPKKHPWTSRLEHFTGYKPADIKDCVLLVHDLYLSRRGGALAAIREKYKQHKFKFVSVMPSPPEIPIPYFEDVRI | 406 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 33994556 | 33997080 | - | CePI673135_05g022570.1 | Cec05g2257 | 204060 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g2257 | 406 | SUPERFAMILY | Cyclin-like | 270 | 395 | IPR036915 | - | |
Cec05g2257 | 406 | PANTHER | CYCLINS | 123 | 381 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cec05g2257 | 406 | SMART | cyclin_7 | 274 | 362 | IPR013763 | - | |
Cec05g2257 | 406 | SMART | cyclin_7 | 177 | 261 | IPR013763 | - | |
Cec05g2257 | 406 | Gene3D | - | 139 | 389 | - | - | |
Cec05g2257 | 406 | FunFam | Mitotic cyclin 6 | 155 | 255 | - | - | |
Cec05g2257 | 406 | Pfam | Cyclin, C-terminal domain | 270 | 392 | IPR004367 | - | |
Cec05g2257 | 406 | CDD | CYCLIN_AtCycA-like_rpt2 | 270 | 384 | - | - | |
Cec05g2257 | 406 | MobiDBLite | consensus disorder prediction | 42 | 61 | - | - | |
Cec05g2257 | 406 | SUPERFAMILY | Cyclin-like | 128 | 267 | IPR036915 | - | |
Cec05g2257 | 406 | Pfam | Cyclin, N-terminal domain | 139 | 267 | IPR006671 | - | |
Cec05g2257 | 406 | PIRSF | Cyclin_A_B_D_E | 6 | 397 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Cec05g2257 | 406 | SMART | Cyclin_C_2 | 270 | 393 | IPR004367 | - | |
Cec05g2257 | 406 | Gene3D | - | 153 | 268 | - | - | |
Cec05g2257 | 406 | MobiDBLite | consensus disorder prediction | 74 | 128 | - | - | |
Cec05g2257 | 406 | FunFam | Cyclin A1 | 257 | 389 | - | - | |
Cec05g2257 | 406 | ProSitePatterns | Cyclins signature. | 172 | 203 | IPR048258 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0707 | Cec-Chr2:7403638 | Cec05g2257 | Cec-Chr5:33994556 | 1.70E-84 | dispersed | |
Cec05g2257 | Cec-Chr5:33994556 | Cec08g0619 | Cec-Chr8:17738459 | 4.80E-82 | dispersed | |
Cec05g2257 | Cec-Chr5:33994556 | Cec08g1681 | Cec-Chr8:28093077 | 8.60E-132 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g2257 | K06627 | - | csv:101207493 | 662.529 |