Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2289 ATGATCCTCCTCCGCCTCTCTGTTTTCGCTGTTGTTCTTTTTCAGATATCCTCCGCCGTGGGCGCCGGCACAAGGTCTTACTGGACGGTGAAGTCCTTGCCGGGATTGTCGGGGCCTCTGCCTTTCGAGCTGGAAACAGGATACGTAGGAGTGGGAAATTCGGAGGAATTTCAGCTGTTTTATTATTTTATCAAATCTTATGGAAATCCCAAAACGGATCCTCTGATTTTGTGGCTCACTGGAGGCCCCCGTTGCTCTACTCTCTCTGGAATTGCCTTTGAAAGTGGTCCAATAAATTTTGAGGGAGAACCTAAAAATGGGAGCATTCCTCAAATAATCTTGAACCCTTACTCATGGACCAAGAAATCCAGTATAATATATATAGACTTACCGGTTGGCACGGGTTTTTCATATGCTAAAACTTCAAAAGATCATAAATCAGGAGATTATGAACAAGTTCACCATTCCCTTCAATTTTTGAGAAAGTGGTTGGTCAATCATCCAGAATTTATATCAAATCCATTCTATGTTGCTGGAGATTCTTACGCTGGTATGATTGTTCCAGTTGTTGTTAAAGAAATTTTAGAAGGAAATGATAAACATATTTTTCCATTTATAAATTTTCAGGGATACATATTGGGAAATCCTATCACTACCCCTCATTCAAATAAAAATTTTGAAATCCCATTTGCTCATAACATGGCCCTCATCTCGGATGAATTGTTTGAGTCGTTGAAAACTAGTTGCCAAGGAGAATACGTGAACATCGATCCAAATAATGTGGAGTGCTTAAGACATCATGATATGTTTAAAAAGTGTACTTCTACCGTTCTAGATGGATGTATTTTATGGCCCAAGTGTTCATCTTTGAAAGAACCAGATGTGTCTGAACCAAATATGTATGATACTCATAGATCTCTCTACAACGTTCCTGTCGATCGTAGATGTCGTGTGTATGACTACCTTCTTGCTTATTATTGGGCTAACAATGACCAAGTTCGAAAAGCACTTCATATACATGAGGGAAGCATTGGAGAATGGATTAGATGTCGTGACAAACATCATTACAATGTTGAGCTTGATAGTGTTTTTCCTTATCACGTGGACCTTAGTTCTAAAGGTTATCGATCACTAATCTATAGCGGAGACCATGATATGATAGTATCGCATATGGATACTCAAGCATGGATCAAATCTCTAAATTATTCTATAGTAGATGATTGGAGGCCATGGTACATCGAGGATGAAGTTGCCGGATGCACGAGAAGTTTTGCAAATAAGATGACATTTGCAACTATAAAAGGTGGAGGACATACAGCAGAATATAAGCGTAAAGAATGCAGCATATTATTTAATAGATGGATAGTGGGAGAATCCTTATAA 1383 38.83 MILLRLSVFAVVLFQISSAVGAGTRSYWTVKSLPGLSGPLPFELETGYVGVGNSEEFQLFYYFIKSYGNPKTDPLILWLTGGPRCSTLSGIAFESGPINFEGEPKNGSIPQIILNPYSWTKKSSIIYIDLPVGTGFSYAKTSKDHKSGDYEQVHHSLQFLRKWLVNHPEFISNPFYVAGDSYAGMIVPVVVKEILEGNDKHIFPFINFQGYILGNPITTPHSNKNFEIPFAHNMALISDELFESLKTSCQGEYVNIDPNNVECLRHHDMFKKCTSTVLDGCILWPKCSSLKEPDVSEPNMYDTHRSLYNVPVDRRCRVYDYLLAYYWANNDQVRKALHIHEGSIGEWIRCRDKHHYNVELDSVFPYHVDLSSKGYRSLIYSGDHDMIVSHMDTQAWIKSLNYSIVDDWRPWYIEDEVAGCTRSFANKMTFATIKGGGHTAEYKRKECSILFNRWIVGESL 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34210700 34215935 - CePI673135_05g022890.1 Cec05g2289 204092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2289 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2289 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2289 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2289 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2289 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 454 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cec05g2289 460 SUPERFAMILY alpha/beta-Hydrolases 29 457 IPR029058 -
Cec05g2289 460 FunFam Carboxypeptidase 315 459 - -
Cec05g2289 460 Gene3D alpha/beta hydrolase 33 460 IPR029058 -
Cec05g2289 460 Pfam Serine carboxypeptidase 34 456 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2289 460 FunFam Serine carboxypeptidase-like 11 24 460 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2289 Cec-Chr5:34210700 Cec05g2901 Cec-Chr5:39125237 9.00E-170 dispersed
Cec05g2289 Cec-Chr5:34210700 Cec05g2291 Cec-Chr5:34231429 9.60E-07 proximal
Cec05g2288 Cec-Chr5:34202031 Cec05g2289 Cec-Chr5:34210700 3.50E-163 tandem
Cec05g2289 Cec-Chr5:34210700 Cec05g2290 Cec-Chr5:34219729 1.40E-183 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2289 K16296 - csv:101207623 719.153