Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2290 ATGCCCACCGCCGTCTTCCGCGTCTCTGTTCTGTTCGTCTCTGTTTTTCAAATCATCTCCGCCGCAGGGTCGTCGCGCTGGACGGTGGAGTATCTGCCGGGATTTGCAGGCCGTCTCCCATTCGAACTGGAAACAGGATATGTGGGTGTTGGGGATTTGGAGGAAGTGCAATTGTTTTATTATTTTGTGAAATCGGAAGGAAATCCAAAGACGGATCCTCTGCTTTTTTGGCTCACCGGAGGCCCCGGTTGCTCCGCTTTAACTGCACTTGCCTTTGAAGTTGGTCCCATAAATTTTAAGATTGAGCGATACAATGGGAGCTTACCTAAAATAATCTTGAACCCTTATTCGTGGACGAAGAAATCCAGTATAATAATGGTAGATTTGCCAGTGGGAACAGGATTTTCATATGGTAAAACTCCACAATCTCTTAAGACTGGAGATTTTAATCAAGTTCATCATTCTATTCAATTTTTTAAAAAGTGGTTAACTCATCATCCGGAATTTATATCTAATCCATTTTATGTGGGTGGAGATTCATACTCGGGTATTATCATTCCGGTTATTGCTCAAGAAATTTTGGAAGAAAATAAGTATGCTCCCTATGTAAATCTTCAGGGATACATATTGGGAAACCCAGTCACCATTCGTGATACGTATCAAAATTTTGCAATTTCTTTTGCTCATAGAATGACTCTTATCTCTGATGAGTTATTTGAGTCATTGACCTCTAGTTGCAAGGGAGAATATATAAATATTGATCCGAGCAATGTGGATTGTTTAAGACATTATAATACGTACCAAAAGTGTGTTTCAAAGATAGAAAAGTCAAGTATTTTGTTGCCAAAATGTTTGTTTCATTCTCCAAAGAAACAACAAGATGCATTTGATCGAAGATCTCTTTACAATACCCCCAAAGTGCTTCTTGATCCCGAGCCAGCACTTCCTTCTCTTGATTGCCCTACCTATAAATTCCTACTTTCATTTTATTGGGCAAACAATAATCAAGTTCGGAAAGCACTCCACATACGAGAGGGAAGCATTGGAGAATGGACAAGATGTAGGGATCGGCAAAATTACAACTTTGATGTTGGGAGTGCTTTTCCTTATCATGTGAACCTTAGTTCGAAAGGTTACAAGTCTTTGATTTATAGTGGGGATCATGATATGATTGTATCGCATTTGGACACTCAAGCATGGATTAAATCTTTAAATTATTCCATTGTTGAGGATTGGAGACCTTGGTTTATTGCAGATCAAGTAGCTGGATATACAAGAAGCTATGCAAATAAGATGACATTTGCCACTATAAAAGGTGGAGGGCACACAGCAGAATATACACAAAAAGAATGCAGTGTAGCATTTAGTAGATGGATAACTGGAGAACCCTTATAA 1395 39.14 MPTAVFRVSVLFVSVFQIISAAGSSRWTVEYLPGFAGRLPFELETGYVGVGDLEEVQLFYYFVKSEGNPKTDPLLFWLTGGPGCSALTALAFEVGPINFKIERYNGSLPKIILNPYSWTKKSSIIMVDLPVGTGFSYGKTPQSLKTGDFNQVHHSIQFFKKWLTHHPEFISNPFYVGGDSYSGIIIPVIAQEILEENKYAPYVNLQGYILGNPVTIRDTYQNFAISFAHRMTLISDELFESLTSSCKGEYINIDPSNVDCLRHYNTYQKCVSKIEKSSILLPKCLFHSPKKQQDAFDRRSLYNTPKVLLDPEPALPSLDCPTYKFLLSFYWANNNQVRKALHIREGSIGEWTRCRDRQNYNFDVGSAFPYHVNLSSKGYKSLIYSGDHDMIVSHLDTQAWIKSLNYSIVEDWRPWFIADQVAGYTRSYANKMTFATIKGGGHTAEYTQKECSVAFSRWITGEPL 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34219729 34223235 - CePI673135_05g022900.1 Cec05g2290 204093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2290 464 FunFam Carboxypeptidase 319 463 - -
Cec05g2290 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 458 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cec05g2290 464 Pfam Serine carboxypeptidase 33 460 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2290 464 FunFam Serine carboxypeptidase-like 11 23 464 - -
Cec05g2290 464 Gene3D alpha/beta hydrolase 29 463 IPR029058 -
Cec05g2290 464 SUPERFAMILY alpha/beta-Hydrolases 29 462 IPR029058 -
Cec05g2290 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2290 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2290 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2290 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2288 Cec-Chr5:34202031 Cec05g2290 Cec-Chr5:34219729 2.10E-184 dispersed
Cec05g2290 Cec-Chr5:34219729 Cec05g2901 Cec-Chr5:39125237 1.30E-181 dispersed
Cec05g2289 Cec-Chr5:34210700 Cec05g2290 Cec-Chr5:34219729 1.40E-183 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2290 K16296 - csv:101207623 594.349