Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2309 ATGGCTGATTGTGGAACAGAGCAGCGTACTCTGGAAGATACTTCAACTTGGGCTGTTGCGGTTGTTTGTTTTTTCTTGGTTGTTATTTCAATCTTCATTGAACATGTCATTCATCTCACTGGAAAGTGGCTGGAGAAAAGGCACAAGCCAGCTCTTGTTGAAGCTCTAGAAAAGGTTAAAGCAGAGCTTATGCTGTTGGGATTTATATCCCTACTTCTAACGGTGGGCCAAGATGCTGTCACTCAAATTTGTGTTTCGAAGGAGCTTGCGACAACTTGGCTTCCATGTGCAGCAAAAGCTAAAACAGGAGTAAAAGTTGCGAAGAACAGTCGTCTTAAACTTCTTGAATTTTTAGATCCTGACTATGGTTCGAGGCGTATTTTAGCCTCAAAAGGAGACGATGCGTGCGCTAAGAGGGGTCAACTTGCTTTCGTGTCTGCATATGGAATCCACCAGCTCCATATTTTCATCTTTGTATTGGCTGTCTTCCATGTTCTATACTGCATCACCACTTTGGCTTTGGGCAGAACAAAGATGAGCAAATGGAAGGCCTGGGAGGATGAGACAAAAACAATTGAATACCAGTACTATAATGATCCAGCAAGATTTAGATTTGCCAGAGATACAACATTTGGACGCCGGCACTTGAGCTTTTGGAGTCGTACACCACTTTCCCTCTGGATTGTTTGTTTCTTTCGACAATTCTTTGGATCAGTTACCAAGGTTGATTACATGACACTGAGGCATGGATTCATCGTTGCACATCTAGCGCCCGGAAGTGAAGTAAAATTCGATTTCCATAAATACATCAGCAGATCTCTTGAAGACGACTTTAAAGTTGTTGTGGGGATTAGTCCAGCAATGTGGCTATTTGCTGTTCTCTTCATCCTAACCAATACAAATGGGTGGTATTCATATCTATGGCTGCCTTTCATCTCCTTAGTTATAATTCTGTTGGTGGGAACGAAGCTCCATGTTATCATAACTCAAATGGGATTGACGATTCAAGAAAGGGGCCACGTTGTGAAGGGTGTTCCCGTCGTTCAGCCCCGGGATGACCTGTTTTGGTTCGGACGTCCGCAACTTATTCTCTTTCTGATTCACTTTGTTCTCTTTATGAATGCATTTCAGCTTGCCTTCTTTGCTTGGACCACATACGCATTTAAGTGGAGAGCTTGCTTCCATCAACGAATTGAAGATATTGCCATCAGACTCTCAATGGGGGTTATCATACAAGTTCTATGCAGTTATGTGACACTCCCACTCTATGCTTTGGTGACGCAGATGGGCTCTAACATGAGACCAACCATTTTCAACGACCGAGTGGCGACGGCATTGAAGAACTGGCACCACTCTGCCAAGAAGAACATGAAGCACCAGCGCAACCCAGACAGTACCTCACCATTCTCAAGCAGGCCAACTACTCCAACTCACGGCATGTCTCCTATTCACCTTCTGCACAAACATCAGCATGGCAGCACATCTCCCAGGCTATCTGATGCCGAACCAGATCGTTGGGACATTGAAGAGTTGCCTCCTTCACACCATAGTAGAGCCCATGATAATCAAGAACAAGAACATTCTGAGACAAATAGAGAACAGGAGATGACAGTTCAACGGCCAAGTTCAACAGAAACTAGTTCCATGACACGTCCTGCTCGCCCTCAACATGAAATCACTAGGAATCCCTCAGACTTCTCATTTGCCAAATGA 1713 44.37 MADCGTEQRTLEDTSTWAVAVVCFFLVVISIFIEHVIHLTGKWLEKRHKPALVEALEKVKAELMLLGFISLLLTVGQDAVTQICVSKELATTWLPCAAKAKTGVKVAKNSRLKLLEFLDPDYGSRRILASKGDDACAKRGQLAFVSAYGIHQLHIFIFVLAVFHVLYCITTLALGRTKMSKWKAWEDETKTIEYQYYNDPARFRFARDTTFGRRHLSFWSRTPLSLWIVCFFRQFFGSVTKVDYMTLRHGFIVAHLAPGSEVKFDFHKYISRSLEDDFKVVVGISPAMWLFAVLFILTNTNGWYSYLWLPFISLVIILLVGTKLHVIITQMGLTIQERGHVVKGVPVVQPRDDLFWFGRPQLILFLIHFVLFMNAFQLAFFAWTTYAFKWRACFHQRIEDIAIRLSMGVIIQVLCSYVTLPLYALVTQMGSNMRPTIFNDRVATALKNWHHSAKKNMKHQRNPDSTSPFSSRPTTPTHGMSPIHLLHKHQHGSTSPRLSDAEPDRWDIEELPPSHHSRAHDNQEQEHSETNREQEMTVQRPSSTETSSMTRPARPQHEITRNPSDFSFAK 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34381886 34385966 + CePI673135_05g023090.1 Cec05g2309 204112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2309 570 MobiDBLite consensus disorder prediction 462 478 - -
Cec05g2309 570 Pfam Mlo family 8 489 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cec05g2309 570 MobiDBLite consensus disorder prediction 535 570 - -
Cec05g2309 570 MobiDBLite consensus disorder prediction 451 570 - -
Cec05g2309 570 MobiDBLite consensus disorder prediction 493 534 - -
Cec05g2309 570 PANTHER MLO-LIKE PROTEIN 1 4 537 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2213 Cec-Chr2:39573532 Cec05g2309 Cec-Chr5:34381886 5.80E-193 dispersed
Cec03g0230 Cec-Chr3:2535040 Cec05g2309 Cec-Chr5:34381886 6.00E-120 dispersed
Cec04g2040 Cec-Chr4:38494730 Cec05g2309 Cec-Chr5:34381886 4.00E-110 dispersed
Cec05g2309 Cec-Chr5:34381886 Cec10g0014 Cec-Chr10:213887 6.20E-128 dispersed
Cec05g2309 Cec-Chr5:34381886 Cec03g0228 Cec-Chr3:2479828 1.70E-189 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2309 K08472 - csv:101218929 1082.78