Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2309 ATGGCTGATTGTGGAACAGAGCAGCGTACTCTGGAAGATACTTCAACTTGGGCTGTTGCGGTTGTTTGTTTTTTCTTGGTTGTTATTTCAATCTTCATTGAACATGTCATTCATCTCACTGGAAAGTGGCTGGAGAAAAGGCACAAGCCAGCTCTTGTTGAAGCTCTAGAAAAGGTTAAAGCAGAGCTTATGCTGTTGGGATTTATATCCCTACTTCTAACGGTGGGCCAAGATGCTGTCACTCAAATTTGTGTTTCGAAGGAGCTTGCGACAACTTGGCTTCCATGTGCAGCAAAAGCTAAAACAGGAGTAAAAGTTGCGAAGAACAGTCGTCTTAAACTTCTTGAATTTTTAGATCCTGACTATGGTTCGAGGCGTATTTTAGCCTCAAAAGGAGACGATGCGTGCGCTAAGAGGGGTCAACTTGCTTTCGTGTCTGCATATGGAATCCACCAGCTCCATATTTTCATCTTTGTATTGGCTGTCTTCCATGTTCTATACTGCATCACCACTTTGGCTTTGGGCAGAACAAAGATGAGCAAATGGAAGGCCTGGGAGGATGAGACAAAAACAATTGAATACCAGTACTATAATGATCCAGCAAGATTTAGATTTGCCAGAGATACAACATTTGGACGCCGGCACTTGAGCTTTTGGAGTCGTACACCACTTTCCCTCTGGATTGTTTGTTTCTTTCGACAATTCTTTGGATCAGTTACCAAGGTTGATTACATGACACTGAGGCATGGATTCATCGTTGCACATCTAGCGCCCGGAAGTGAAGTAAAATTCGATTTCCATAAATACATCAGCAGATCTCTTGAAGACGACTTTAAAGTTGTTGTGGGGATTAGTCCAGCAATGTGGCTATTTGCTGTTCTCTTCATCCTAACCAATACAAATGGGTGGTATTCATATCTATGGCTGCCTTTCATCTCCTTAGTTATAATTCTGTTGGTGGGAACGAAGCTCCATGTTATCATAACTCAAATGGGATTGACGATTCAAGAAAGGGGCCACGTTGTGAAGGGTGTTCCCGTCGTTCAGCCCCGGGATGACCTGTTTTGGTTCGGACGTCCGCAACTTATTCTCTTTCTGATTCACTTTGTTCTCTTTATGAATGCATTTCAGCTTGCCTTCTTTGCTTGGACCACATACGCATTTAAGTGGAGAGCTTGCTTCCATCAACGAATTGAAGATATTGCCATCAGACTCTCAATGGGGGTTATCATACAAGTTCTATGCAGTTATGTGACACTCCCACTCTATGCTTTGGTGACGCAGATGGGCTCTAACATGAGACCAACCATTTTCAACGACCGAGTGGCGACGGCATTGAAGAACTGGCACCACTCTGCCAAGAAGAACATGAAGCACCAGCGCAACCCAGACAGTACCTCACCATTCTCAAGCAGGCCAACTACTCCAACTCACGGCATGTCTCCTATTCACCTTCTGCACAAACATCAGCATGGCAGCACATCTCCCAGGCTATCTGATGCCGAACCAGATCGTTGGGACATTGAAGAGTTGCCTCCTTCACACCATAGTAGAGCCCATGATAATCAAGAACAAGAACATTCTGAGACAAATAGAGAACAGGAGATGACAGTTCAACGGCCAAGTTCAACAGAAACTAGTTCCATGACACGTCCTGCTCGCCCTCAACATGAAATCACTAGGAATCCCTCAGACTTCTCATTTGCCAAATGA 1713 44.37 MADCGTEQRTLEDTSTWAVAVVCFFLVVISIFIEHVIHLTGKWLEKRHKPALVEALEKVKAELMLLGFISLLLTVGQDAVTQICVSKELATTWLPCAAKAKTGVKVAKNSRLKLLEFLDPDYGSRRILASKGDDACAKRGQLAFVSAYGIHQLHIFIFVLAVFHVLYCITTLALGRTKMSKWKAWEDETKTIEYQYYNDPARFRFARDTTFGRRHLSFWSRTPLSLWIVCFFRQFFGSVTKVDYMTLRHGFIVAHLAPGSEVKFDFHKYISRSLEDDFKVVVGISPAMWLFAVLFILTNTNGWYSYLWLPFISLVIILLVGTKLHVIITQMGLTIQERGHVVKGVPVVQPRDDLFWFGRPQLILFLIHFVLFMNAFQLAFFAWTTYAFKWRACFHQRIEDIAIRLSMGVIIQVLCSYVTLPLYALVTQMGSNMRPTIFNDRVATALKNWHHSAKKNMKHQRNPDSTSPFSSRPTTPTHGMSPIHLLHKHQHGSTSPRLSDAEPDRWDIEELPPSHHSRAHDNQEQEHSETNREQEMTVQRPSSTETSSMTRPARPQHEITRNPSDFSFAK 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34381886 34385966 + CePI673135_05g023090.1 Cec05g2309 204112

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2309 570 MobiDBLite consensus disorder prediction 462 478 - -
Cec05g2309 570 Pfam Mlo family 8 489 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cec05g2309 570 MobiDBLite consensus disorder prediction 535 570 - -
Cec05g2309 570 MobiDBLite consensus disorder prediction 451 570 - -
Cec05g2309 570 MobiDBLite consensus disorder prediction 493 534 - -
Cec05g2309 570 PANTHER MLO-LIKE PROTEIN 1 4 537 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2309 K08472 - - csv:101218929 1082.78
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2213 Cec-Chr2:39573532 Cec05g2309 Cec-Chr5:34381886 5.80E-193 dispersed
Cec03g0230 Cec-Chr3:2535040 Cec05g2309 Cec-Chr5:34381886 6.00E-120 dispersed
Cec04g2040 Cec-Chr4:38494730 Cec05g2309 Cec-Chr5:34381886 4.00E-110 dispersed
Cec05g2309 Cec-Chr5:34381886 Cec10g0014 Cec-Chr10:213887 6.20E-128 dispersed
Cec05g2309 Cec-Chr5:34381886 Cec03g0228 Cec-Chr3:2479828 1.70E-189 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi13g491 . . . Bda15g00172 . . Bma03g00332 . . Cmo04g01433 Cma04g01359 . Car04g01437 . . . . . . . . . . . Cla05g02133 Cam05g2289 Cec05g2309 Cco05g2351 Clacu05g2283 Cmu05g2147 Cre05g2268 . . . . . . . Cme10g00061 Blo13g00727 . Bda14g00343 . Bpe04g01877 . . Bma08g00944 . . . . . . . Cpe01g01228 . . . . . . . . . . . . . . . Lsi04g00059 . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec09g1988 . 39 589 MLO family AT5G53760 69.2 3.6e-216 748.0
Cec11g1858 . 5 551 MLO family AT5G53760 69.2 3.6e-216 748.0
Cec03g0230 . 10 458 MLO family AT3G45290 52.7 4.1e-131 465.3
Cec09g1988 . 39 589 MLO family AT1G26700 67.8 2.8e-210 728.4
Cec11g1858 . 1 532 MLO family AT1G26700 68.3 1.8e-209 725.7
Cec03g0228 . 8 536 MLO family AT2G39200 63.5 6.1e-192 667.5
Cec05g2309 . 7 499 MLO family AT2G39200 67.7 8.0e-192 667.2
Cec02g2213 . 8 505 MLO family AT2G39200 67.3 5.2e-191 664.5
Cec02g2213 . 1 416 MLO family AT1G61560 65.9 2.9e-159 558.5
Cec03g0228 . 1 416 MLO family AT1G61560 65.9 1.3e-156 549.7
Cec05g2309 . 7 408 MLO family AT1G61560 65.2 9.0e-153 537.0
Cec04g1809 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cec10g0014 . 29 423 MLO family AT1G61560 50.2 5.5e-110 394.8
Cec04g1809 . 18 490 MLO family AT2G17430 63.4 3.0e-172 602.1
Cec10g0014 . 29 490 MLO family AT2G17430 63.4 1.5e-160 563.1
Cec08g0962 . 4 480 MLO family AT2G17430 58.1 1.3e-151 533.5
Cec04g1809 . 7 567 MLO family AT2G17480 63.4 1.9e-196 682.6
Cec10g0014 . 5 574 MLO family AT2G17480 59.1 5.2e-178 621.3
Cec08g0962 . 4 465 MLO family AT2G17480 59.7 2.9e-152 535.8
Cec03g0228 . 8 463 MLO family AT2G17480 52.2 6.7e-125 444.9
Cec02g2213 . 8 463 MLO family AT2G17480 50.5 1.5e-124 443.7
Cec08g0962 . 1 381 MLO family AT1G42560 59.7 3.2e-128 455.3
Cec04g1809 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cec10g0014 . 29 388 MLO family AT1G42560 56.5 1.6e-111 399.8
Cec06g0057 . 6 419 MLO family AT4G24250 54.2 7.7e-117 417.5
Cec04g1809 . 8 387 MLO family AT5G65970 66.8 8.0e-145 510.8
Cec10g0014 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cec08g0962 . 7 381 MLO family AT5G65970 58.2 3.6e-121 432.2
Cec02g2213 . 2 381 MLO family AT5G65970 52.1 3.3e-106 382.5
Cec03g0228 . 2 381 MLO family AT5G65970 50.7 8.4e-102 367.9
Cec08g0962 . 2 543 MLO family AT2G33670 60.4 9.2e-176 613.6
Cec04g1809 . 20 470 MLO family AT2G33670 61.6 5.0e-158 554.7
Cec10g0014 . 29 471 MLO family AT2G33670 58.7 7.3e-141 497.7
Cec05g2309 . 64 524 MLO family AT1G11310 63.9 4.2e-168 588.2
Cec03g0228 . 63 506 MLO family AT1G11310 64.9 4.3e-165 578.2
Cec02g2213 . 63 520 MLO family AT1G11310 62.7 1.5e-162 569.7
Cec06g0057 . 5 501 MLO family AT2G44110 59.5 2.5e-165 578.9
Cec06g0057 . 1 508 MLO family AT4G02600 72.9 1.2e-213 739.6
Cec05g1128 . 3 535 MLO family AT1G11000 58.7 1.3e-170 596.7
Cec06g0057 . 1 508 MLO family AT4G02600 72.9 1.2e-213 739.6
Cec05g2309 . 64 524 MLO family AT1G11310 63.9 4.2e-168 588.2
Cec03g0228 . 63 506 MLO family AT1G11310 64.9 4.3e-165 578.2
Cec02g2213 . 63 520 MLO family AT1G11310 62.7 1.5e-162 569.7
Cec03g0230 . 10 458 MLO family AT3G45290 52.7 4.1e-131 465.3
Cec05g1128 . 3 535 MLO family AT1G11000 58.7 1.3e-170 596.7
Cec08g0962 . 2 543 MLO family AT2G33670 60.4 9.2e-176 613.6
Cec04g1809 . 20 470 MLO family AT2G33670 61.6 5.0e-158 554.7
Cec10g0014 . 29 471 MLO family AT2G33670 58.7 7.3e-141 497.7
Cec02g2213 . 1 416 MLO family AT1G61560 65.9 2.9e-159 558.5
Cec03g0228 . 1 416 MLO family AT1G61560 65.9 1.3e-156 549.7
Cec05g2309 . 7 408 MLO family AT1G61560 65.2 9.0e-153 537.0
Cec04g1809 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cec10g0014 . 29 423 MLO family AT1G61560 50.2 5.5e-110 394.8
Cec04g1809 . 18 490 MLO family AT2G17430 63.4 3.0e-172 602.1
Cec10g0014 . 29 490 MLO family AT2G17430 63.4 1.5e-160 563.1
Cec08g0962 . 4 480 MLO family AT2G17430 58.1 1.3e-151 533.5
Cec04g1809 . 7 567 MLO family AT2G17480 63.4 1.9e-196 682.6
Cec10g0014 . 5 574 MLO family AT2G17480 59.1 5.2e-178 621.3
Cec08g0962 . 4 465 MLO family AT2G17480 59.7 2.9e-152 535.8
Cec03g0228 . 8 463 MLO family AT2G17480 52.2 6.7e-125 444.9
Cec02g2213 . 8 463 MLO family AT2G17480 50.5 1.5e-124 443.7
Cec08g0962 . 1 381 MLO family AT1G42560 59.7 3.2e-128 455.3
Cec04g1809 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cec10g0014 . 29 388 MLO family AT1G42560 56.5 1.6e-111 399.8
Cec04g1809 . 8 387 MLO family AT5G65970 66.8 8.0e-145 510.8
Cec10g0014 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cec08g0962 . 7 381 MLO family AT5G65970 58.2 3.6e-121 432.2
Cec02g2213 . 2 381 MLO family AT5G65970 52.1 3.3e-106 382.5
Cec03g0228 . 2 381 MLO family AT5G65970 50.7 8.4e-102 367.9
Cec09g1988 . 39 589 MLO family AT5G53760 69.2 3.6e-216 748.0
Cec11g1858 . 5 551 MLO family AT5G53760 69.2 3.6e-216 748.0
Cec03g0228 . 8 536 MLO family AT2G39200 63.5 6.1e-192 667.5
Cec05g2309 . 7 499 MLO family AT2G39200 67.7 8.0e-192 667.2
Cec02g2213 . 8 505 MLO family AT2G39200 67.3 5.2e-191 664.5
Cec06g0057 . 6 419 MLO family AT4G24250 54.2 7.7e-117 417.5
Cec09g1988 . 39 589 MLO family AT1G26700 67.8 2.8e-210 728.4
Cec11g1858 . 1 532 MLO family AT1G26700 68.3 1.8e-209 725.7
Cec06g0057 . 5 501 MLO family AT2G44110 59.5 2.5e-165 578.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005733 2 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 0 2 1 1 1 1 1 1 1 1 2 3 0 39