Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2349 ATGGTGGCCGGCAGATCAGGAATCTCTGGGTGCTCCAACATAAGGAGCATAGTCGTCCACGTCATCATCGGAAGGTGGTTCGTGGTGTTCGCTTCGCTCTTAATCATGGCGGCTGCCGGAGCAACGTACATGTTTGGCCTATATTCGAACGACATAAAATCTGTTTTGGGTTATGACCAAACAACGTTGAATTTGCTGAGTTTTTTCAAAGATTTGGGTGCAAACGTCGGCGTTTTGTCAGGACTTATTAACGAGGTTACGCCGCCATGGGTGGTTTTGTCCATCGGCGCTGTTTTGAATTTTTTTGGTTACTTCATGATTTGGCTGACTGTTACTAAGCGGATCTCTACCCCCAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCCAATTCTCAATCTTTTGCTAATACGGGTTCTCTTGTTACCTGTGTCAAAAACTTTCCTCAGAGTCGTGGCGTAGTTCTCGGTATCTTGAAGGGATACGTCGGACTGAGCGGCGCCATAATCACACAACTCTTCCATGCATTTTACGGCAACGACACCAAATCCTTAATTCTCCTCATCGGATGGCTCCCGGCGGCAATTTCCTTCGCATTTTTACGAACAATTCGTATTATGAAAGTTATCCGACAGCCAAACGAGCTTAAAGTCTTCTACAATTTCCTTTACATTTCTCTTGGCCTCGCCGGATTCCTAATGCTAATGATCATCGTAGAGAGCAAAACAGAGTTCATTCAAAGCGAATACGGTGGCAGCGCCGCTGTCGTCCTTCTCCTCCTCTTCCTCCCACTCGCCGTCGTCATCATTGAAGAATACAATCTCTGGAAACTCAAAACCGTCCTCATTAAATCCCCAAATCCCTCTGTTCAAATAGTAACAGAGAAACTCCCAAAAACCGAGCAACTCCATAAGACAGAGCATCCAAAACAACAACACAAACAAGCATCTTGTTGGACAACAATTTTCAACCCACCAGCGCGCGGCGAGGATTTCACAATTCTCCAAGCTCTCTTCAGTGTCGACATGCTGATTCTATTCCTCTCTGCAATTTGCGGCGTCGGCGGAACATTAACGGCAATAGACAATTTGGGTCAAATCGGAATGTCTTTGGGGTACCCAAAAAGAAGCATTAGCACATTTGTAACATTAGTCAGCATTTGGAATTACCTCGGCCGAGTTGCCTCTGGTTTCATCTCAGAAATAGTTTTGACAAAATACAAATTCCCTCGTCCTCTAATGCTCTCTCTGACCCTTCTTTTTTCCTGCATTGGCCATTTGATGATCGCATTTGATGTCCCAAATGGGCTTTATGTGGCTTCCGTCGTAATTGGATTCTGCTTTGGAGCACAGTGGCCATTGATTTTCGCCATAATTTCAGAGCTTTTTGGGTTGAAATATTACTCCACACTATACAATTTTGGGGCAGTGGCAAGCCCAGTTGGGCTTTATGTTCTGAATGTGAAAGTGGCTGGGAATTTCTACGACAGAGAAGCAGAGAAGCAACTGAGTGCAAAAGGGATGATCAGAAAAGCAGGGGAAGAATTAAAGTGCTTTGGAGGGGAATGCTTCAAGCTTTCATTCATTGTAATTACTGCAGTTACTTTGTTGGGTATGTTTGTTTCGTTGATTTTAGTGATTAGAACGAGGAGTTTTTACAAGAGTGATATTTATCAGAAGTTCCGAGATGAAGCTGAAACAGAGGTGGCCGGAAGTGGATGTTTGGCGGCGGCCACAGCAACAGAAGAGACAAGAAAATGA 1764 44.33 MVAGRSGISGCSNIRSIVVHVIIGRWFVVFASLLIMAAAGATYMFGLYSNDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVLNFFGYFMIWLTVTKRISTPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPQSRGVVLGILKGYVGLSGAIITQLFHAFYGNDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLGLAGFLMLMIIVESKTEFIQSEYGGSAAVVLLLLFLPLAVVIIEEYNLWKLKTVLIKSPNPSVQIVTEKLPKTEQLHKTEHPKQQHKQASCWTTIFNPPARGEDFTILQALFSVDMLILFLSAICGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFISEIVLTKYKFPRPLMLSLTLLFSCIGHLMIAFDVPNGLYVASVVIGFCFGAQWPLIFAIISELFGLKYYSTLYNFGAVASPVGLYVLNVKVAGNFYDREAEKQLSAKGMIRKAGEELKCFGGECFKLSFIVITAVTLLGMFVSLILVIRTRSFYKSDIYQKFRDEAETEVAGSGCLAAATATEETRK 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34731182 34733435 + CePI673135_05g023490.1 Cec05g2349 204152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2349 587 CDD MFS_Mch1p_like 24 540 - -
Cec05g2349 587 Pfam Nodulin-like 25 270 IPR010658 -
Cec05g2349 587 Gene3D MFS general substrate transporter like domains 333 555 IPR036259 -
Cec05g2349 587 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 562 - GO:0016020(PANTHER)
Cec05g2349 587 FunFam Nodulin family protein 335 556 - -
Cec05g2349 587 SUPERFAMILY MFS general substrate transporter 24 552 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0261 Cec-Chr3:2832730 Cec05g2349 Cec-Chr5:34731182 1.40E-140 dispersed
Cec03g0262 Cec-Chr3:2840508 Cec05g2349 Cec-Chr5:34731182 2.10E-192 dispersed
Cec04g1084 Cec-Chr4:30365522 Cec05g2349 Cec-Chr5:34731182 1.00E-186 dispersed
Cec05g2349 Cec-Chr5:34731182 Cec05g2351 Cec-Chr5:34752256 8.10E-208 dispersed
Cec05g2349 Cec-Chr5:34731182 Cec05g2350 Cec-Chr5:34742318 2.30E-242 tandem
Cec10g2008 Cec-Chr10:34857088 Cec05g2349 Cec-Chr5:34731182 1.90E-204 wgd
Cec05g2349 Cec-Chr5:34731182 Cec08g0813 Cec-Chr8:19977796 5.10E-218 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2349 - - - 0.0