Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2350 ATGGTGGCCTGTAGAGGAATCTCGAGGTGCTGCAACATATGGAGCATCGTCGTCCATGTCATCACTGGGCGGTGGTTCACGGTGTTCGCTTCACTCCTAATCATGGTGTATTCGAACGACATAAAATTTGACGACGTTGAATTTGCTGAGCTTTTTCAAGTTCTATCCATCGGCGCCGTTTTGAATTTCTTTGGTTACTTTATGATTTGGTTGGCTGTTACTAAGCGAATCTCTGCCCCCAAAGTTTGGCAAATGTGTCTCTATATTTTTATTGGAGTCAATTCTCAATCTTTTCTCTTGTTACTTGTGTCAAGAACTTCCCCGAAAGCCGTAGTGTTGTTCTTAGGTATCTTAAAGGCATACGTCGGACTGAGCGGCGCCATAACCACACAACTCTTCCATGCATTTTACGGCAACGACACCAAATCCTTAATTCTCCTCATCGGATGGCTCCCGGCGGCAATTTCCTTCGCATTTTTACGAACAATTCGTATTATGAAAGTTATCCGACAGCCAAACGAGCTTAAAGTCTTCTACAATTTCCTTTACATTTCTCTTGGCCTCGCCGGATTCCTAATGCTAATGATCATCGTAGAGAGCAAAACAGAGTTCATTCAAAGCGAATACGGTGGCAGCGCCGCTGTCGTCCTTCTCCTCCTCTTCCTCCCACTCGCCGTCGTCATCATTGAAGAATACAATCTCTGGAAACTCAAAACCGTCCTCATTAAATCCCCAAATCCCTCTGTTCAAATAGTAACAGAGAAACTCCCAAAAACCGAGCAACTCCATAAGACAGAGCATCCAAAACAACAACACAAACAAGCATCTTGTTGGACAACAATTTTCAACCCACCAGCGCGCGGCGAGGATTTCACAATTCTCCAAGCTCTCTTCAGTGTCGACATGCTGATTCTATTCCTCTCTGCAATTTGCGGCGTCGGCGGAACATTAACGGCAATAGACAATTTGGGTCAAATCGGAATGTCTTTGGGGTACCCAAAAAGAAGCATTAGCACATTTGTAACATTAGTCAGCATTTGGAATTACCTCGGCCGAGTTGCCTCTGGTTTCATCTCAGAAATAGTTTTGACAAAATACAAATTCCCTCGTCCTCTAATGCTCTCTCTGACCCTTCTTTTTTCCTGCATTGGCCATTTGATGATCGCATTTGATGTTCCAAATGAGCTTTATGTGGCTTCCGTCGTAATCGGATTTTGTTTTGGAGCACAGTGGCCATTGATTTTCGCAATAATTTCCGAACTTTTTGGATTGAAATATTACTCAACACTTTTCAATTTTGGGTCAGTGGCGAGCCCAATTGGACTTTATGTTCTGAATGTGAAAGTGGCTGGAAATTTCTACGATAGAGAGGCAGAGAAACAGCTCAGAGCAAAAGGGATGATTAGAAAAGCAGGGGAAGAATTAAAGTGCCTTGGAAGGGAATGCTTTAAGATTTCGTTCATTGTAATTACTGCAGTTACTTTCTTGGAGGTGGCCGGAAATGGGGCTGTGGCGGCGAGCGAAGCAGCGGAAGAGACGAGAAAATGA 1548 43.86 MVACRGISRCCNIWSIVVHVITGRWFTVFASLLIMVYSNDIKFDDVEFAELFQVLSIGAVLNFFGYFMIWLAVTKRISAPKVWQMCLYIFIGVNSQSFLLLLVSRTSPKAVVLFLGILKAYVGLSGAITTQLFHAFYGNDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLGLAGFLMLMIIVESKTEFIQSEYGGSAAVVLLLLFLPLAVVIIEEYNLWKLKTVLIKSPNPSVQIVTEKLPKTEQLHKTEHPKQQHKQASCWTTIFNPPARGEDFTILQALFSVDMLILFLSAICGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFISEIVLTKYKFPRPLMLSLTLLFSCIGHLMIAFDVPNELYVASVVIGFCFGAQWPLIFAIISELFGLKYYSTLFNFGSVASPIGLYVLNVKVAGNFYDREAEKQLRAKGMIRKAGEELKCLGRECFKISFIVITAVTFLEVAGNGAVAASEAAEETRK 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34742318 34744651 + CePI673135_05g023500.1 Cec05g2350 204153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2350 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 26 498 - GO:0016020(PANTHER)
Cec05g2350 515 Pfam Nodulin-like 50 228 IPR010658 -
Cec05g2350 515 Gene3D MFS general substrate transporter like domains 290 496 IPR036259 -
Cec05g2350 515 SUPERFAMILY MFS general substrate transporter 287 442 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2350 Cec-Chr5:34742318 Cec08g0813 Cec-Chr8:19977796 1.10E-160 dispersed
Cec05g2349 Cec-Chr5:34731182 Cec05g2350 Cec-Chr5:34742318 2.30E-242 tandem
Cec05g2350 Cec-Chr5:34742318 Cec05g2351 Cec-Chr5:34752256 8.80E-150 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2350 - - - 0.0